| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is yhaP [H]
Identifier: 162447222
GI number: 162447222
Start: 375058
End: 376371
Strand: Direct
Name: yhaP [H]
Synonym: ACL_0356
Alternate gene names: 162447222
Gene position: 375058-376371 (Clockwise)
Preceding gene: 162447221
Following gene: 162447223
Centisome position: 25.05
GC content: 32.12
Gene sequence:
>1314_bases ATGAAGAAGCTTAAGTATTTAATTAAATATGGATTAAAGAAAAGACTTTTTACAAAAGCATTTTATATTTCAACAGCAGT CATTGGTGTTTTAATTGTAGGTATTACATTACTACCTACAATTATTAGTAGTTTTGCTGATGAACCGGGTGGAGAGATTA TCGATAATAGAATAACTATTGTAGATACAACCGGATATAACTTTGATGATGCACTACAAACAGTCATTAATTTCTCTTTA TTCAATTTATTTGATAACCAAATTGAATATCTTTTATCAAATGATATTCCTGATGCAACATATTATGATGATGCACTACC AAACTCTGGGTTAATTTACATTTATTTAGAAGGTGGTTTGGTTCAAGTACAAGTATATAATTCTGGTTTACATGGCTATG TAGCATCTATACTTGAAAGTTTCTTACCAAACTTACAAAGACTAAAATATGAAATTGATAATCCAGGTTCTACTGGAATG ATTAATGATGTTACTGTAGATTTTGTAAAAGATCCAAATGCAGAAGATACAGAACTTCAATCCATTATGTCAGCTTTATC TACAGCAGTGATTATCCCAATCTTTATTTTAATTACAATTGCACTCCAGTTCATAGGTACTGAGATTATGGAAGAAAAAT CTACTAAGGCAATTGAGATTATTATTGCATCTGTACCACCTAGAACACACTTTTTTGCTAAGATATTGTCCATCATGATA TTCTTAGTAGTTCAGCTATTAACCTATGTTATCTTTGGACTAGTAGGGTTTGGCTTAAACGAACTGATTGCTAGTGGCAG TACCTCAGTTGGCGGTAGTTGGGGTGATATTGTAGGTATTTTAGGACCAGTTATTTTACCTACATTACTTGTAACTTTAG TATGTGCTGTATTAGGGGCACTTATCTATGCAATCATAGGTGGATTCTTCGCATCATTATCAGTTAACCAAGAAGATTAT CAAGCAATTCAAACACCTGTTATGATGATTTTAATGATTTCATATATGGGTGGGATATTTGCAGGTGCATCCCAACTATC AGGATTACTCTTATTCTTTGGATACTTCCCATTTAGTGCACCACTTGTTTTACCGGTTGCATTTGCTGCTGGACAATTAG GTTGGTTAGAAGTAGTTATTAGTTTTGCTATTATGATAGTAACTGCAGTAGGGTTACTTGCAGTATTTACACCACTTTAC CGTGCAAGTATTCTATCTTATGATCAATCCTCATTATTTAAACGTATTAAAAACACTTACCGTACATCTAAGGTATTAAA AGACAATCAAAAATTATATGAAGGTAAAAAGTAA
Upstream 100 bases:
>100_bases AGTGTATTTGATTATATTAAGACACTAGAGAATTTAAGAAAATATGATGTTGAGCAAGCAAGTTTATCTGAGATATTTAT TGCGAAAGTAGGTAAAAAGT
Downstream 100 bases:
>100_bases TTGAGCAAATTAGAACAATTAAAAATTGAATTAAATAAATTAATAGATCCATCATTGAATAAAACATTTGAAGAAGTAGG CAGTATTTTAAGTATTAAAG
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MKKLKYLIKYGLKKRLFTKAFYISTAVIGVLIVGITLLPTIISSFADEPGGEIIDNRITIVDTTGYNFDDALQTVINFSL FNLFDNQIEYLLSNDIPDATYYDDALPNSGLIYIYLEGGLVQVQVYNSGLHGYVASILESFLPNLQRLKYEIDNPGSTGM INDVTVDFVKDPNAEDTELQSIMSALSTAVIIPIFILITIALQFIGTEIMEEKSTKAIEIIIASVPPRTHFFAKILSIMI FLVVQLLTYVIFGLVGFGLNELIASGSTSVGGSWGDIVGILGPVILPTLLVTLVCAVLGALIYAIIGGFFASLSVNQEDY QAIQTPVMMILMISYMGGIFAGASQLSGLLLFFGYFPFSAPLVLPVAFAAGQLGWLEVVISFAIMIVTAVGLLAVFTPLY RASILSYDQSSLFKRIKNTYRTSKVLKDNQKLYEGKK
Sequences:
>Translated_437_residues MKKLKYLIKYGLKKRLFTKAFYISTAVIGVLIVGITLLPTIISSFADEPGGEIIDNRITIVDTTGYNFDDALQTVINFSL FNLFDNQIEYLLSNDIPDATYYDDALPNSGLIYIYLEGGLVQVQVYNSGLHGYVASILESFLPNLQRLKYEIDNPGSTGM INDVTVDFVKDPNAEDTELQSIMSALSTAVIIPIFILITIALQFIGTEIMEEKSTKAIEIIIASVPPRTHFFAKILSIMI FLVVQLLTYVIFGLVGFGLNELIASGSTSVGGSWGDIVGILGPVILPTLLVTLVCAVLGALIYAIIGGFFASLSVNQEDY QAIQTPVMMILMISYMGGIFAGASQLSGLLLFFGYFPFSAPLVLPVAFAAGQLGWLEVVISFAIMIVTAVGLLAVFTPLY RASILSYDQSSLFKRIKNTYRTSKVLKDNQKLYEGKK >Mature_437_residues MKKLKYLIKYGLKKRLFTKAFYISTAVIGVLIVGITLLPTIISSFADEPGGEIIDNRITIVDTTGYNFDDALQTVINFSL FNLFDNQIEYLLSNDIPDATYYDDALPNSGLIYIYLEGGLVQVQVYNSGLHGYVASILESFLPNLQRLKYEIDNPGSTGM INDVTVDFVKDPNAEDTELQSIMSALSTAVIIPIFILITIALQFIGTEIMEEKSTKAIEIIIASVPPRTHFFAKILSIMI FLVVQLLTYVIFGLVGFGLNELIASGSTSVGGSWGDIVGILGPVILPTLLVTLVCAVLGALIYAIIGGFFASLSVNQEDY QAIQTPVMMILMISYMGGIFAGASQLSGLLLFFGYFPFSAPLVLPVAFAAGQLGWLEVVISFAIMIVTAVGLLAVFTPLY RASILSYDQSSLFKRIKNTYRTSKVLKDNQKLYEGKK
Specific function: Unknown
COG id: COG1668
COG function: function code CP; ABC-type Na+ efflux pump, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1024 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47797; Mature: 47797
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLKYLIKYGLKKRLFTKAFYISTAVIGVLIVGITLLPTIISSFADEPGGEIIDNRITI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE VDTTGYNFDDALQTVINFSLFNLFDNQIEYLLSNDIPDATYYDDALPNSGLIYIYLEGGL EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCE VQVQVYNSGLHGYVASILESFLPNLQRLKYEIDNPGSTGMINDVTVDFVKDPNAEDTELQ EEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHH SIMSALSTAVIIPIFILITIALQFIGTEIMEEKSTKAIEIIIASVPPRTHFFAKILSIMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH FLVVQLLTYVIFGLVGFGLNELIASGSTSVGGSWGDIVGILGPVILPTLLVTLVCAVLGA HHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYAIIGGFFASLSVNQEDYQAIQTPVMMILMISYMGGIFAGASQLSGLLLFFGYFPFSA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC PLVLPVAFAAGQLGWLEVVISFAIMIVTAVGLLAVFTPLYRASILSYDQSSLFKRIKNTY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RTSKVLKDNQKLYEGKK HHHHHHHCCHHHHCCCC >Mature Secondary Structure MKKLKYLIKYGLKKRLFTKAFYISTAVIGVLIVGITLLPTIISSFADEPGGEIIDNRITI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE VDTTGYNFDDALQTVINFSLFNLFDNQIEYLLSNDIPDATYYDDALPNSGLIYIYLEGGL EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCE VQVQVYNSGLHGYVASILESFLPNLQRLKYEIDNPGSTGMINDVTVDFVKDPNAEDTELQ EEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHH SIMSALSTAVIIPIFILITIALQFIGTEIMEEKSTKAIEIIIASVPPRTHFFAKILSIMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH FLVVQLLTYVIFGLVGFGLNELIASGSTSVGGSWGDIVGILGPVILPTLLVTLVCAVLGA HHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYAIIGGFFASLSVNQEDYQAIQTPVMMILMISYMGGIFAGASQLSGLLLFFGYFPFSA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC PLVLPVAFAAGQLGWLEVVISFAIMIVTAVGLLAVFTPLYRASILSYDQSSLFKRIKNTY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RTSKVLKDNQKLYEGKK HHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]