| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is secA [H]
Identifier: 162447196
GI number: 162447196
Start: 340599
End: 343067
Strand: Direct
Name: secA [H]
Synonym: ACL_0330
Alternate gene names: 162447196
Gene position: 340599-343067 (Clockwise)
Preceding gene: 162447195
Following gene: 162447197
Centisome position: 22.75
GC content: 33.66
Gene sequence:
>2469_bases ATGTTTGGACTATTTGATTCGACCAAAAAAGCAGTAAAAAAATATAACAAAGTAGCTCATAAAATTATGGCTTTAGAAGA TACAATGAAAGCAATGAGTGACGAAGCATTAAAAAATCAAACTAAAATTTTTAAAGATCGTATTAAAAATGGAGAAACTT TAGACGATATTTTAGTTGAAGCATTTGCAACAGTTAGAGAAGCCTCAAAACGTGTAACTGGGCTAACACCATATTTTGTA CAATTAGTTGGTGGTATGTCGATTCACGATGGTAATATTGCTGAAATGAGAACAGGTGAAGGTAAAACCTTAACCGCTGT TTTACCTGCATATTTAAATGCTTTAAATGGTGATGGTGTGCATATTGTTACAGTCAACGAATACTTAGCTAAACGTGAAG CTGAAGGCGAAATTGGTGACCTATTTAGATTCTTAGGATTAACTGTAGGTTTAAATATTAGAGATTTAGATAGAGAAGGT AAAAAGGCAGCATATGCTTGTGATATTATGTACTCTACAAACTCTGAGTTAGGCTTTGATTACTTAAGAGATCACATGGT CTTATATCATAAAGATATGGTTGCACAAAGAGGCTACCCATACGCAATTATTGATGAGGTTGACTCGATTTTAATTGATG AGGCTAGAACACCTTTGATTATCTCTGGACCTGCTAAACAAACTCAAAACTTATACCAACAATCTGATCGTTTTGTAAAA TCTTTAAGTGATCATGAATATGAATTAGATGTAGAGTCAAATACTGTCGAGTTAACACCTGAAGGTATTGCTAAAGCAGA AAGCGTATTTAATATTGAAAACTTATATGACTTAAGTCATGTATCTTTATTACATCACATCAACAATGCTTTAAAAGCTA ATTTCACCATGTTTAGAGACAAAGAATATATGGTTGTAGAAGGTGAAGTTTTAATTATTGACCAATTTACAGGTCGTGTA CTAAAGGGTAGACAATTTAGTGAAGGTCTACACCAAGCACTTGAAGCCAAAGAAAACGTTGAAATTAAAAAAGAAACTGT TACAGTAGCTACAATTACGTACCAAAACTTCTTTAGAATGTATAAAAAACTATCTGGTATGACCGGTACTGCAAAGACTG AAGAAGATGAATTTATAGAAATTTATAACATGAGTGTTATTGAAATTCCTACAAACAAACCAGTCATTAGAGAAGATGCT AAAGATTACTTCTTTGTAACAGCAGAAGAAAAATATCAAGCATTAATTGAAGAAATCAAACGTAGACACGAGATTGGGCA ACCCATATTAATTGGTACAATTGCAGTCGAAACATCAGAATTTTTAAGTATGGAATTACGCAAACATCGTATTAACCATG AAGTATTAAACGCTAAAAACCATGAAAGAGAAGCTGAAATTGTTGCTAAAGCTGGTCAAAAAGGTGCGGTTACAATCGCG ACCAACATGGCTGGACGTGGTACCGACATTAAACTTGGTGAAGGTGTAGTGGAACTTGGTGGTTTAGCAGTATTAGGTTC TGAAAAACACGATGCTAGACGTATTGATAATCAGTTAAGAGGTCGTTCTGGACGTCAAGGGGATCCTGGTTTTTCAAGAT TCTACTTATCTGCAGAAGATGAACTCATGGTACGTCGTGGAGGAGACCGTTTTAGAACAATTATTGAAACACTTCAACGT GCCCAAGCAACCGGTGAACCAGTAACTTCTAAGATGATTACATCTTTAATTACTGGTGCACAAAAACGTAGTGAAGGTGT CAACTCAGAAATTAGAAAAAACGTCTTAAGATATGACGATGTTTTAAGAGTGCAAAGAGAAATTATTTATGCTGAACGTA CATCTATTTTAACTAAAGAAACTGTTGAAGAAGAAGTCATTAAGTTTATTGAAACAATTGTTGAAGCTGAAATTGATGAG TTTATCATTCCTCACGGAAGAAATAAATTTGAAATTAAAGATGAAGCAATTGTTCACCATTTTGAAAGTTTCTTAATACC TAAAGGTATGGTTAAAATTGAAGATGTAAATGAAATGGATGAAGTAGAAATTGTCAACCATTATAAAGATCTTGCGATTA AATTATTAGTAAGTAAAAAAGAAGTTGTACCTCAAGAAGTGTACAATGAGTTTTTAAAAGTAATCATGTTACGTGTAATT GATACTTATTGGATGCGTCATATTGATGCAATGAGTGAGTTACGACAAGGTGTTAGACTACAATCATACGGTCAACAAAA TCCGTTAATTATTTACCAAAAAGAAGGTAAACGTATGTTTGATGAAATGCGCTACAATATTTCAAAAGATATTGCTAGAT ATGCTGCACTGGGTCGTATTGAATTAAATGTTAGCCGTGAAGCGGTTGTTAAAAATACAAGCACAAACCAAGGTGAAGAT GCTTCTAAACAAAAACGTAAACAACCTAAGCGTGCTCACAGAAGTCAATTACCGTGGAATAGAAGGTAG
Upstream 100 bases:
>100_bases CCATGATAAGGTATGATTTGGGTTTTATGCCAAATCGTTTTAGATTAAATAAAGAATAATGAAGTACACATAAACTTAAA CAAGTAAAGGAAGTGATGTT
Downstream 100 bases:
>100_bases TTATGGAAAAGTACGAAGTAAATAAGACACTAGAACTTTTTGAAACAAAAATTAAAGATTTAGAAAATGCTTTAGATTTA GATGCTATTAATAACAGATT
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 822; Mature: 822
Protein sequence:
>822_residues MFGLFDSTKKAVKKYNKVAHKIMALEDTMKAMSDEALKNQTKIFKDRIKNGETLDDILVEAFATVREASKRVTGLTPYFV QLVGGMSIHDGNIAEMRTGEGKTLTAVLPAYLNALNGDGVHIVTVNEYLAKREAEGEIGDLFRFLGLTVGLNIRDLDREG KKAAYACDIMYSTNSELGFDYLRDHMVLYHKDMVAQRGYPYAIIDEVDSILIDEARTPLIISGPAKQTQNLYQQSDRFVK SLSDHEYELDVESNTVELTPEGIAKAESVFNIENLYDLSHVSLLHHINNALKANFTMFRDKEYMVVEGEVLIIDQFTGRV LKGRQFSEGLHQALEAKENVEIKKETVTVATITYQNFFRMYKKLSGMTGTAKTEEDEFIEIYNMSVIEIPTNKPVIREDA KDYFFVTAEEKYQALIEEIKRRHEIGQPILIGTIAVETSEFLSMELRKHRINHEVLNAKNHEREAEIVAKAGQKGAVTIA TNMAGRGTDIKLGEGVVELGGLAVLGSEKHDARRIDNQLRGRSGRQGDPGFSRFYLSAEDELMVRRGGDRFRTIIETLQR AQATGEPVTSKMITSLITGAQKRSEGVNSEIRKNVLRYDDVLRVQREIIYAERTSILTKETVEEEVIKFIETIVEAEIDE FIIPHGRNKFEIKDEAIVHHFESFLIPKGMVKIEDVNEMDEVEIVNHYKDLAIKLLVSKKEVVPQEVYNEFLKVIMLRVI DTYWMRHIDAMSELRQGVRLQSYGQQNPLIIYQKEGKRMFDEMRYNISKDIARYAALGRIELNVSREAVVKNTSTNQGED ASKQKRKQPKRAHRSQLPWNRR
Sequences:
>Translated_822_residues MFGLFDSTKKAVKKYNKVAHKIMALEDTMKAMSDEALKNQTKIFKDRIKNGETLDDILVEAFATVREASKRVTGLTPYFV QLVGGMSIHDGNIAEMRTGEGKTLTAVLPAYLNALNGDGVHIVTVNEYLAKREAEGEIGDLFRFLGLTVGLNIRDLDREG KKAAYACDIMYSTNSELGFDYLRDHMVLYHKDMVAQRGYPYAIIDEVDSILIDEARTPLIISGPAKQTQNLYQQSDRFVK SLSDHEYELDVESNTVELTPEGIAKAESVFNIENLYDLSHVSLLHHINNALKANFTMFRDKEYMVVEGEVLIIDQFTGRV LKGRQFSEGLHQALEAKENVEIKKETVTVATITYQNFFRMYKKLSGMTGTAKTEEDEFIEIYNMSVIEIPTNKPVIREDA KDYFFVTAEEKYQALIEEIKRRHEIGQPILIGTIAVETSEFLSMELRKHRINHEVLNAKNHEREAEIVAKAGQKGAVTIA TNMAGRGTDIKLGEGVVELGGLAVLGSEKHDARRIDNQLRGRSGRQGDPGFSRFYLSAEDELMVRRGGDRFRTIIETLQR AQATGEPVTSKMITSLITGAQKRSEGVNSEIRKNVLRYDDVLRVQREIIYAERTSILTKETVEEEVIKFIETIVEAEIDE FIIPHGRNKFEIKDEAIVHHFESFLIPKGMVKIEDVNEMDEVEIVNHYKDLAIKLLVSKKEVVPQEVYNEFLKVIMLRVI DTYWMRHIDAMSELRQGVRLQSYGQQNPLIIYQKEGKRMFDEMRYNISKDIARYAALGRIELNVSREAVVKNTSTNQGED ASKQKRKQPKRAHRSQLPWNRR >Mature_822_residues MFGLFDSTKKAVKKYNKVAHKIMALEDTMKAMSDEALKNQTKIFKDRIKNGETLDDILVEAFATVREASKRVTGLTPYFV QLVGGMSIHDGNIAEMRTGEGKTLTAVLPAYLNALNGDGVHIVTVNEYLAKREAEGEIGDLFRFLGLTVGLNIRDLDREG KKAAYACDIMYSTNSELGFDYLRDHMVLYHKDMVAQRGYPYAIIDEVDSILIDEARTPLIISGPAKQTQNLYQQSDRFVK SLSDHEYELDVESNTVELTPEGIAKAESVFNIENLYDLSHVSLLHHINNALKANFTMFRDKEYMVVEGEVLIIDQFTGRV LKGRQFSEGLHQALEAKENVEIKKETVTVATITYQNFFRMYKKLSGMTGTAKTEEDEFIEIYNMSVIEIPTNKPVIREDA KDYFFVTAEEKYQALIEEIKRRHEIGQPILIGTIAVETSEFLSMELRKHRINHEVLNAKNHEREAEIVAKAGQKGAVTIA TNMAGRGTDIKLGEGVVELGGLAVLGSEKHDARRIDNQLRGRSGRQGDPGFSRFYLSAEDELMVRRGGDRFRTIIETLQR AQATGEPVTSKMITSLITGAQKRSEGVNSEIRKNVLRYDDVLRVQREIIYAERTSILTKETVEEEVIKFIETIVEAEIDE FIIPHGRNKFEIKDEAIVHHFESFLIPKGMVKIEDVNEMDEVEIVNHYKDLAIKLLVSKKEVVPQEVYNEFLKVIMLRVI DTYWMRHIDAMSELRQGVRLQSYGQQNPLIIYQKEGKRMFDEMRYNISKDIARYAALGRIELNVSREAVVKNTSTNQGED ASKQKRKQPKRAHRSQLPWNRR
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=858, Percent_Identity=43.006993006993, Blast_Score=652, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 93786; Mature: 93786
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLFDSTKKAVKKYNKVAHKIMALEDTMKAMSDEALKNQTKIFKDRIKNGETLDDILVE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AFATVREASKRVTGLTPYFVQLVGGMSIHDGNIAEMRTGEGKTLTAVLPAYLNALNGDGV HHHHHHHHHHHHCCCCHHHHHHHCCCEECCCCCCEEECCCCCCHHHHHHHHHHHCCCCCE HIVTVNEYLAKREAEGEIGDLFRFLGLTVGLNIRDLDREGKKAAYACDIMYSTNSELGFD EEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEEEEEECCCCCCHH YLRDHMVLYHKDMVAQRGYPYAIIDEVDSILIDEARTPLIISGPAKQTQNLYQQSDRFVK HHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHH SLSDHEYELDVESNTVELTPEGIAKAESVFNIENLYDLSHVSLLHHINNALKANFTMFRD HHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC KEYMVVEGEVLIIDQFTGRVLKGRQFSEGLHQALEAKENVEIKKETVTVATITYQNFFRM CCEEEEECCEEEEECCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEHHHHHHHH YKKLSGMTGTAKTEEDEFIEIYNMSVIEIPTNKPVIREDAKDYFFVTAEEKYQALIEEIK HHHHCCCCCCCCCCCCCEEEEECEEEEEECCCCCCHHCCCCCEEEEEEHHHHHHHHHHHH RRHEIGQPILIGTIAVETSEFLSMELRKHRINHEVLNAKNHEREAEIVAKAGQKGAVTIA HHHHCCCCEEEEEEEECHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCCCEEEEE TNMAGRGTDIKLGEGVVELGGLAVLGSEKHDARRIDNQLRGRSGRQGDPGFSRFYLSAED ECCCCCCCCEECCCCHHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC ELMVRRGGDRFRTIIETLQRAQATGEPVTSKMITSLITGAQKRSEGVNSEIRKNVLRYDD HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VLRVQREIIYAERTSILTKETVEEEVIKFIETIVEAEIDEFIIPHGRNKFEIKDEAIVHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHH FESFLIPKGMVKIEDVNEMDEVEIVNHYKDLAIKLLVSKKEVVPQEVYNEFLKVIMLRVI HHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DTYWMRHIDAMSELRQGVRLQSYGQQNPLIIYQKEGKRMFDEMRYNISKDIARYAALGRI HHHHHHHHHHHHHHHHCCEEHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEE ELNVSREAVVKNTSTNQGEDASKQKRKQPKRAHRSQLPWNRR EEECCHHHHEECCCCCCCCCHHHHHHHCHHHHHHHCCCCCCC >Mature Secondary Structure MFGLFDSTKKAVKKYNKVAHKIMALEDTMKAMSDEALKNQTKIFKDRIKNGETLDDILVE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AFATVREASKRVTGLTPYFVQLVGGMSIHDGNIAEMRTGEGKTLTAVLPAYLNALNGDGV HHHHHHHHHHHHCCCCHHHHHHHCCCEECCCCCCEEECCCCCCHHHHHHHHHHHCCCCCE HIVTVNEYLAKREAEGEIGDLFRFLGLTVGLNIRDLDREGKKAAYACDIMYSTNSELGFD EEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEEEEEECCCCCCHH YLRDHMVLYHKDMVAQRGYPYAIIDEVDSILIDEARTPLIISGPAKQTQNLYQQSDRFVK HHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHH SLSDHEYELDVESNTVELTPEGIAKAESVFNIENLYDLSHVSLLHHINNALKANFTMFRD HHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC KEYMVVEGEVLIIDQFTGRVLKGRQFSEGLHQALEAKENVEIKKETVTVATITYQNFFRM CCEEEEECCEEEEECCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEHHHHHHHH YKKLSGMTGTAKTEEDEFIEIYNMSVIEIPTNKPVIREDAKDYFFVTAEEKYQALIEEIK HHHHCCCCCCCCCCCCCEEEEECEEEEEECCCCCCHHCCCCCEEEEEEHHHHHHHHHHHH RRHEIGQPILIGTIAVETSEFLSMELRKHRINHEVLNAKNHEREAEIVAKAGQKGAVTIA HHHHCCCCEEEEEEEECHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCCCEEEEE TNMAGRGTDIKLGEGVVELGGLAVLGSEKHDARRIDNQLRGRSGRQGDPGFSRFYLSAED ECCCCCCCCEECCCCHHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC ELMVRRGGDRFRTIIETLQRAQATGEPVTSKMITSLITGAQKRSEGVNSEIRKNVLRYDD HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VLRVQREIIYAERTSILTKETVEEEVIKFIETIVEAEIDEFIIPHGRNKFEIKDEAIVHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHH FESFLIPKGMVKIEDVNEMDEVEIVNHYKDLAIKLLVSKKEVVPQEVYNEFLKVIMLRVI HHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DTYWMRHIDAMSELRQGVRLQSYGQQNPLIIYQKEGKRMFDEMRYNISKDIARYAALGRI HHHHHHHHHHHHHHHHCCEEHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEE ELNVSREAVVKNTSTNQGEDASKQKRKQPKRAHRSQLPWNRR EEECCHHHHEECCCCCCCCCHHHHHHHCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA