| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is 162447178
Identifier: 162447178
GI number: 162447178
Start: 322475
End: 323416
Strand: Direct
Name: 162447178
Synonym: ACL_0312
Alternate gene names: NA
Gene position: 322475-323416 (Clockwise)
Preceding gene: 162447177
Following gene: 162447179
Centisome position: 21.54
GC content: 30.15
Gene sequence:
>942_bases ATGTTATTTGATGCACATGCAGATATTTTAACAGATATCTATGAACAACTAAAAATAGGTAATAAAGACCCATTTACAAC AAGACATTTAAATCATTATAAAAATAGTGGTATCACACACAGTATTTTTGTAAATTGGACTGATCCAGATAAAGGCACTA GAACAGATTTTTATAACTGCTTTGATGTAGCTATAAACTACATCAAGGGAAAATCGAACCTTTTTAAAATATGCTATAAC ACAAAAGATGTAAAAGAAGCAGTTAGTTTAAATAAACTTGGTGTATTTTTAGGTGTAGAGGGTATCAAATATTTAGATAA ACCAGAAGACATAGAACTACTCTATGAAAAAGGGGTTCGTCATGCATCACTAACATGGAATGAAGTCAATGATTATGCAA CAGGTTTATCCAGTGTAGAAACAGGGATTACACCTAAAGGAAAAGAAGCTATTAAAAAAATGATGGAACTAGGTATGTTA ATTGATCTTAGCCATGCCAATGAAAAAACATTTAAAGATGTTTTTGATTTAGCAACTAAACCACTTGTTGTAACACACGG TAATGCAAAAGCGCTTTGTAATCATAAAAGAAACTACACAGATGAACAACTTCAAATGATTAAAGATAAAAATGGAGTCA TTGGTGTATGTGCTGTACCTAATTTCATATCGGGAGAAAAGACAAATCAAAATGTTTCCTATTTAGCGAAACATATTGAC TACATTGTAAAACTTATAGGTATTGATCATGTAGGCATTGGACTTGATGTATGTTACTACTTATATGAAGATGTTACAAG TACACATGTAGAAGGGCTTCAAACAATTAAAGATGCTAAAAATTTACTGAATGAACTCATCAAATTAGGCTATTCTAAAG AGGATATTGAAAAGATATCCTATAAAAACTTTCATAGAGTTTTAGATGAAGTATTAAAATAG
Upstream 100 bases:
>100_bases CCAGTTGATGACTGGTCTTTATGCTTAAAATTCACATATAATGCCTTATGAAAACCATGTTATAATAATAAGTAATATAA ATAAAAAGTAGGTAATCACC
Downstream 100 bases:
>100_bases AACACCTGATTTTATGTAAAAAATTTAGGCACATAGAGTAAGCATCAATTGATACATTTATAAAGGAATAAGTATATTGT TTCATCAATTAAAGGTTTGA
Product: M19 family membrane dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLFDAHADILTDIYEQLKIGNKDPFTTRHLNHYKNSGITHSIFVNWTDPDKGTRTDFYNCFDVAINYIKGKSNLFKICYN TKDVKEAVSLNKLGVFLGVEGIKYLDKPEDIELLYEKGVRHASLTWNEVNDYATGLSSVETGITPKGKEAIKKMMELGML IDLSHANEKTFKDVFDLATKPLVVTHGNAKALCNHKRNYTDEQLQMIKDKNGVIGVCAVPNFISGEKTNQNVSYLAKHID YIVKLIGIDHVGIGLDVCYYLYEDVTSTHVEGLQTIKDAKNLLNELIKLGYSKEDIEKISYKNFHRVLDEVLK
Sequences:
>Translated_313_residues MLFDAHADILTDIYEQLKIGNKDPFTTRHLNHYKNSGITHSIFVNWTDPDKGTRTDFYNCFDVAINYIKGKSNLFKICYN TKDVKEAVSLNKLGVFLGVEGIKYLDKPEDIELLYEKGVRHASLTWNEVNDYATGLSSVETGITPKGKEAIKKMMELGML IDLSHANEKTFKDVFDLATKPLVVTHGNAKALCNHKRNYTDEQLQMIKDKNGVIGVCAVPNFISGEKTNQNVSYLAKHID YIVKLIGIDHVGIGLDVCYYLYEDVTSTHVEGLQTIKDAKNLLNELIKLGYSKEDIEKISYKNFHRVLDEVLK >Mature_313_residues MLFDAHADILTDIYEQLKIGNKDPFTTRHLNHYKNSGITHSIFVNWTDPDKGTRTDFYNCFDVAINYIKGKSNLFKICYN TKDVKEAVSLNKLGVFLGVEGIKYLDKPEDIELLYEKGVRHASLTWNEVNDYATGLSSVETGITPKGKEAIKKMMELGML IDLSHANEKTFKDVFDLATKPLVVTHGNAKALCNHKRNYTDEQLQMIKDKNGVIGVCAVPNFISGEKTNQNVSYLAKHID YIVKLIGIDHVGIGLDVCYYLYEDVTSTHVEGLQTIKDAKNLLNELIKLGYSKEDIEKISYKNFHRVLDEVLK
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=243, Percent_Identity=31.6872427983539, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI189458885, Length=260, Percent_Identity=27.3076923076923, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI4758190, Length=260, Percent_Identity=27.3076923076923, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI193211608, Length=233, Percent_Identity=28.3261802575107, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI193211610, Length=233, Percent_Identity=28.755364806867, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI221475880, Length=251, Percent_Identity=30.6772908366534, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI281362638, Length=340, Percent_Identity=27.3529411764706, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI281362636, Length=340, Percent_Identity=27.3529411764706, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI161083233, Length=257, Percent_Identity=27.6264591439689, Blast_Score=108, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 35490; Mature: 35490
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFDAHADILTDIYEQLKIGNKDPFTTRHLNHYKNSGITHSIFVNWTDPDKGTRTDFYNC CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHH FDVAINYIKGKSNLFKICYNTKDVKEAVSLNKLGVFLGVEGIKYLDKPEDIELLYEKGVR HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCC HASLTWNEVNDYATGLSSVETGITPKGKEAIKKMMELGMLIDLSHANEKTFKDVFDLATK EEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCC PLVVTHGNAKALCNHKRNYTDEQLQMIKDKNGVIGVCAVPNFISGEKTNQNVSYLAKHID CEEEECCCHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH YIVKLIGIDHVGIGLDVCYYLYEDVTSTHVEGLQTIKDAKNLLNELIKLGYSKEDIEKIS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YKNFHRVLDEVLK HHHHHHHHHHHHC >Mature Secondary Structure MLFDAHADILTDIYEQLKIGNKDPFTTRHLNHYKNSGITHSIFVNWTDPDKGTRTDFYNC CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHH FDVAINYIKGKSNLFKICYNTKDVKEAVSLNKLGVFLGVEGIKYLDKPEDIELLYEKGVR HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCC HASLTWNEVNDYATGLSSVETGITPKGKEAIKKMMELGMLIDLSHANEKTFKDVFDLATK EEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCC PLVVTHGNAKALCNHKRNYTDEQLQMIKDKNGVIGVCAVPNFISGEKTNQNVSYLAKHID CEEEECCCHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH YIVKLIGIDHVGIGLDVCYYLYEDVTSTHVEGLQTIKDAKNLLNELIKLGYSKEDIEKIS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YKNFHRVLDEVLK HHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]