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The map label for this gene is yabB [H]

Identifier: 162446999

GI number: 162446999

Start: 110432

End: 111151

Strand: Direct

Name: yabB [H]

Synonym: ACL_0129

Alternate gene names: 162446999

Gene position: 110432-111151 (Clockwise)

Preceding gene: 162446998

Following gene: 162447000

Centisome position: 7.38

GC content: 31.53

Gene sequence:

>720_bases
ATGGTTAAAAGAGATTTGTTAGGTACTAAATTATATATTGAATCAGATATTGGTAAAGCATTTAATATGGATACCATTAT
TTTAAGTGACTTTGTAAGAGTTCCTAAAGACACCAAATCTATTTTAGACTTTGGAACTGGTAATGGAGCGATTATGCTGT
ATTTATCCCAAAGATTTTCTGGGCATATCACCGGTATTGAACTTCAAGAAAAACGTTATGAACTGGCAGTTCATAACATT
AAACTCAACAACTTAGAATCTAGACTTGATGTAGTCAACATGGACCTAAAAACTTATCGATCTAAAAAACATGCGGACAT
CATCGTATCAAACCCACCGTTTTTTAAGGTCAATAACCAAACCAAACAAAGTATCGACATGGATATGCAAATTGCTAAAC
ATGAAATACACTTAAATTTAGAAACCTTAATTGAAGCTGTTAGTAAAAACATTAAACATGGTGGACTATTCTTCATGGTA
CATAAAGCGAATAGATTAGAAGAAATTATCTTAGAACTTAACAAATTTGACTTTAAATTAAAACGTATGAGACTTGTTCA
TCCATCACTTCATCATGAACCCAATCAAGTCTTAATTGAAGCTAAATTTAAAGGTAAGGGCCATTTAATTGTCGAACCAC
CTTTAATTCAGTATAAAGAAAAAGGCATCTACAGCGATGAGATGCAATCAATTTATGATGGAAGGATGTATCATAAATGA

Upstream 100 bases:

>100_bases
ATTTTAAGATTACAAGATCAAATTAAAAATTTAAGATTACCAGTCAATATAAGTTTACAACTTACCTCATTAGCACTGGA
TTTAGAAAGTATTGTTCGAA

Downstream 100 bases:

>100_bases
ACATACAAATAAGTTATGATGTTTTAAAACCAACACTATACATCGTAAGTACACCCATTGGTAGCTTAAAGGATATCACC
TTAAGAGCAATTGAAGTCTT

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MVKRDLLGTKLYIESDIGKAFNMDTIILSDFVRVPKDTKSILDFGTGNGAIMLYLSQRFSGHITGIELQEKRYELAVHNI
KLNNLESRLDVVNMDLKTYRSKKHADIIVSNPPFFKVNNQTKQSIDMDMQIAKHEIHLNLETLIEAVSKNIKHGGLFFMV
HKANRLEEIILELNKFDFKLKRMRLVHPSLHHEPNQVLIEAKFKGKGHLIVEPPLIQYKEKGIYSDEMQSIYDGRMYHK

Sequences:

>Translated_239_residues
MVKRDLLGTKLYIESDIGKAFNMDTIILSDFVRVPKDTKSILDFGTGNGAIMLYLSQRFSGHITGIELQEKRYELAVHNI
KLNNLESRLDVVNMDLKTYRSKKHADIIVSNPPFFKVNNQTKQSIDMDMQIAKHEIHLNLETLIEAVSKNIKHGGLFFMV
HKANRLEEIILELNKFDFKLKRMRLVHPSLHHEPNQVLIEAKFKGKGHLIVEPPLIQYKEKGIYSDEMQSIYDGRMYHK
>Mature_239_residues
MVKRDLLGTKLYIESDIGKAFNMDTIILSDFVRVPKDTKSILDFGTGNGAIMLYLSQRFSGHITGIELQEKRYELAVHNI
KLNNLESRLDVVNMDLKTYRSKKHADIIVSNPPFFKVNNQTKQSIDMDMQIAKHEIHLNLETLIEAVSKNIKHGGLFFMV
HKANRLEEIILELNKFDFKLKRMRLVHPSLHHEPNQVLIEAKFKGKGHLIVEPPLIQYKEKGIYSDEMQSIYDGRMYHK

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 27731; Mature: 27731

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRDLLGTKLYIESDIGKAFNMDTIILSDFVRVPKDTKSILDFGTGNGAIMLYLSQRFS
CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEECCCC
GHITGIELQEKRYELAVHNIKLNNLESRLDVVNMDLKTYRSKKHADIIVSNPPFFKVNNQ
CCEEEEEEHHHEEEEEEEEEEECCHHHHHHEEECCHHHHCCCCCCEEEECCCCEEEECCC
TKQSIDMDMQIAKHEIHLNLETLIEAVSKNIKHGGLFFMVHKANRLEEIILELNKFDFKL
CCHHCCHHHEEEHEEEEECHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCHHE
KRMRLVHPSLHHEPNQVLIEAKFKGKGHLIVEPPLIQYKEKGIYSDEMQSIYDGRMYHK
EHHEEECCHHCCCCCEEEEEEEECCCCEEEECCCHHHHHHCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVKRDLLGTKLYIESDIGKAFNMDTIILSDFVRVPKDTKSILDFGTGNGAIMLYLSQRFS
CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEECCCC
GHITGIELQEKRYELAVHNIKLNNLESRLDVVNMDLKTYRSKKHADIIVSNPPFFKVNNQ
CCEEEEEEHHHEEEEEEEEEEECCHHHHHHEEECCHHHHCCCCCCEEEECCCCEEEECCC
TKQSIDMDMQIAKHEIHLNLETLIEAVSKNIKHGGLFFMVHKANRLEEIILELNKFDFKL
CCHHCCHHHEEEHEEEEECHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCHHE
KRMRLVHPSLHHEPNQVLIEAKFKGKGHLIVEPPLIQYKEKGIYSDEMQSIYDGRMYHK
EHHEEECCHHCCCCCEEEEEEEECCCCEEEECCCHHHHHHCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]