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The map label for this gene is rpmE [H]

Identifier: 162446943

GI number: 162446943

Start: 66016

End: 66273

Strand: Direct

Name: rpmE [H]

Synonym: ACL_0057

Alternate gene names: 162446943

Gene position: 66016-66273 (Clockwise)

Preceding gene: 162446942

Following gene: 162446944

Centisome position: 4.41

GC content: 31.01

Gene sequence:

>258_bases
ATGAAAGCAAATATTCATCCAAAAACAAGATTAGTAATCTTTGAAGATGCTCAAACTAAAAAACAATTTTTAATTGAATC
ATCTGTCAATACAAAAGACACTGAAGTTTATGAAAAAGATGGTAAAACTTATCCGGTAGTCCGTTTAGAAGTTACATCTG
AAACTCACCCATTCTATACAGGTGAACAAACTTTCGTTGCTCAAGCTGGTCGTGTGGATAAATTTAACAAGCGTTTAGAA
AAAGCTAAAAAAGAATAA

Upstream 100 bases:

>100_bases
ATTATGAAATTATGGTGTTGCATTACTTTAAATACATGATATAATAACTATTGCGAAACTTACTATGAGTATTATTTTCT
CATGGCGGAAGGAGAATTCT

Downstream 100 bases:

>100_bases
TCATTACAGCGAGATTGCATCTCGCTTTTTGTTATAATAGGATTAAGTGGGGTAAAAAACATGTATCATACATACCGTAA
TGGTTTCATTGAAGTAGTTT

Product: 50S ribosomal protein L31

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKANIHPKTRLVIFEDAQTKKQFLIESSVNTKDTEVYEKDGKTYPVVRLEVTSETHPFYTGEQTFVAQAGRVDKFNKRLE
KAKKE

Sequences:

>Translated_85_residues
MKANIHPKTRLVIFEDAQTKKQFLIESSVNTKDTEVYEKDGKTYPVVRLEVTSETHPFYTGEQTFVAQAGRVDKFNKRLE
KAKKE
>Mature_85_residues
MKANIHPKTRLVIFEDAQTKKQFLIESSVNTKDTEVYEKDGKTYPVVRLEVTSETHPFYTGEQTFVAQAGRVDKFNKRLE
KAKKE

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily [H]

Homologues:

Organism=Escherichia coli, GI2367109, Length=81, Percent_Identity=45.679012345679, Blast_Score=72, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002150 [H]

Pfam domain/function: PF01197 Ribosomal_L31 [H]

EC number: NA

Molecular weight: Translated: 9863; Mature: 9863

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANIHPKTRLVIFEDAQTKKQFLIESSVNTKDTEVYEKDGKTYPVVRLEVTSETHPFYT
CCCCCCCCEEEEEEECCCCCHHEEEECCCCCCCCEEECCCCCCCCEEEEEECCCCCCEEC
GEQTFVAQAGRVDKFNKRLEKAKKE
CCEEEEECCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKANIHPKTRLVIFEDAQTKKQFLIESSVNTKDTEVYEKDGKTYPVVRLEVTSETHPFYT
CCCCCCCCEEEEEEECCCCCHHEEEECCCCCCCCEEECCCCCCCCEEEEEECCCCCCEEC
GEQTFVAQAGRVDKFNKRLEKAKKE
CCEEEEECCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA