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The map label for this gene is ndvB [H]

Identifier: 162446925

GI number: 162446925

Start: 45347

End: 47767

Strand: Direct

Name: ndvB [H]

Synonym: ACL_0039

Alternate gene names: 162446925

Gene position: 45347-47767 (Clockwise)

Preceding gene: 162446924

Following gene: 162446927

Centisome position: 3.03

GC content: 33.0

Gene sequence:

>2421_bases
ATGAAATATGGCTATTTTGATGATTTAAATAAAGAATACGTGATAACAACACCTTACACACCCTATCCTTGGATAAACTA
TCTAGGTAGTGATGACTATTTTGTTTTAATGTCAAATACTTCTGGTGGTTATAGTTTTTATAAAGATGCAAGAGATAGAA
GAATTACTAGATATCGCTACAATAATGTCCCTGTAGATAATGAAGGTAAATACTTCTTTATAAAAGATAAAGAAAGTATC
TGGAATATTGGTGTTAAACCGACTAAAACACCATTAGACAGTTATGAAGTTAGACATGGTATGGGATACACCAAGTTTAA
TTCTAAAAAAGATGGACTTGTTGCTAAACAACTATCGTTTGTACCAAAAAACTTTAATGGTGAAATCCATAAAATCACTT
TAGAAAATACAACAAATGAAACAAAACATATAGAACTTATATCTTATGTTGAATGGGCATTATGGAATGCCTTAGACGAT
CAAACAAATTTCCAGCGTAATTTATCGATTGGTGAAGTAGAAGTAGATGGGTCTACGATATATCACAAAACTGAATATAG
AGAACGTAGAAACCATTATGCATTTTTTCATGTGAATCACGATCTTAGTGGATTTGATACAGATAGAGAACAATTTTTAG
GTCTATATAATGATGTATCTAGTCCTGAAGTTGTAAGAGAAGGTAAACCTAAAAATAGTATAGCTGATGGATGGTCACCT
ATTGGTTCACACTTTATAAGCGTTGAACTCAAAGCACATGAACATAAAGACTTTATATTCATGATTGGTTATGTTGAAAG
TGATAAATTTGATAAATTTGAAAGTCACAAAGTTATCAACAAAAAATTAGCAAAAGAAATGATCGATAAATATAAAAACG
TAGACCAAGTAATGGCTTCATTTAGAGATTTAAACACATTCTGGCATAACACGCTTTCAAATTATCAAATCAAGTCTAAT
GATGATAAGTTAAACCGTATGGTCAATATTTGGAATCAATACCAAACCATGACAACCTTTAATTTAAGTCGTAGTGCATC
CTATTTTGAATCTGGTGTAGGAAGGGGTATGGGTTTTAGAGACTCTAACCAAGACTTACTAGGATTTATGCATATGGATA
GTGTTAAGACACGTCAAAGATTAATAGATTTAGCATCAACACTACTCTATGATGGTGGTGCATACCATCAGTATTCACCA
CTTACTAAAAAGGGAAATGCTGATTTAGGTTCAGGTTTTAATGATGATCCAAATTGGTTTATATTAGCATGTGTACAGTA
CATTAAAGAGTCTGGTGATTTTACAATCCTTGATGAAGTCATCATGTATGAATCAAATCCAAATTTAAAAGGAAGCATGT
TAGAACACTTAGAAAAAGCATTTTATAAAACGGCACTTAATCTTGGGCCGCATGGTCTACCATTAATTGGTAGAGCTGAT
TGGAATGACTGTCTTAATTTAAACTGTTTTTCAGACGAACCAGGAGAGTCTTTCCAAACAGTTCAAAATAAGGGTGATGG
TAAAACTGCAGAAAGTATCTTTATAGCGGGACTCTTTGTATATGTAGGTAAAAAATACAGTGAACTGCTAGATAGAATAA
ATGATCATCATAACAAACAAAAAGTAGATGCACTCGTACAAAAAATGACACATCAAGTTGAAAAACATGGTTTCGATGGT
AATTGGTTTTTAAGAGCATATGATGCTTATGGTCATAAAGTGGGTTCACACACAAACGATGAAGGAAAGATATTCATCGA
GCCTCAAGGTATATGTGTCATGGCAGGTATTGGTCTTCAAAACGGTATGGCCAAAAAAGCTTTAGATCATGCTAAAACCA
TGTTAGATACACCATATGGTATGGTTCTAAACTATCCAGCCTATTCCACATACCGTTTAGAATTGGGTGAGATTTCAAGT
TATCCTGAAGGCTATAAAGAAAATGGTGGAATTTTCTGCCACAATAATCCTTGGATTGCATGTGCAGAGGCAGTAGTTGG
CAATGGTAATCGTGCATTTGAAGTGTATAAAAAAATCGCACCTGCATATATTGAGGATATCTCTGATATCCACAAGACAG
AACCGTATGTCTACTCACAAATGATTGCAGGTAAAGAAGCTAAAAGACATGGTGAGGCTAAAAACTCATGGCTCACTGGA
ACCTCTGCTTGGAACTTTGTAGCAATTAGTCAATATATTTTAGGTATTCAACCAGAATTTGATGGTTTAAGTATCAAACC
TGTATTACCTGATCATCTAAATGAACTAGAAATTACTAGAAAGTTTAGACAAAACACATATATTATTAAAGTTATAAGAA
CTGGTAAGCAAATGATTGAATATAAGGGTAGAATCTATAAAGATCACATGATACCTTACGTGGTTTCAAACCAAATAGAA
CATATTACAGTACACATATAA

Upstream 100 bases:

>100_bases
AGCAATTATTCCAACAGTGATCATATATCTGATTTTTTCTAAATATATTATAAAAGGTACTACAGCAGGTAGTGTGAAAG
GTTAATAAAGGACAATACTT

Downstream 100 bases:

>100_bases
TTTTTTTCATCTTCCTCCTTATATAGGTGTGGTAAACCTATTAAAAAAATATGGATATCATGGCATCCATATTTTTTTAT
TGTTATGTATAATTCTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 806; Mature: 806

Protein sequence:

>806_residues
MKYGYFDDLNKEYVITTPYTPYPWINYLGSDDYFVLMSNTSGGYSFYKDARDRRITRYRYNNVPVDNEGKYFFIKDKESI
WNIGVKPTKTPLDSYEVRHGMGYTKFNSKKDGLVAKQLSFVPKNFNGEIHKITLENTTNETKHIELISYVEWALWNALDD
QTNFQRNLSIGEVEVDGSTIYHKTEYRERRNHYAFFHVNHDLSGFDTDREQFLGLYNDVSSPEVVREGKPKNSIADGWSP
IGSHFISVELKAHEHKDFIFMIGYVESDKFDKFESHKVINKKLAKEMIDKYKNVDQVMASFRDLNTFWHNTLSNYQIKSN
DDKLNRMVNIWNQYQTMTTFNLSRSASYFESGVGRGMGFRDSNQDLLGFMHMDSVKTRQRLIDLASTLLYDGGAYHQYSP
LTKKGNADLGSGFNDDPNWFILACVQYIKESGDFTILDEVIMYESNPNLKGSMLEHLEKAFYKTALNLGPHGLPLIGRAD
WNDCLNLNCFSDEPGESFQTVQNKGDGKTAESIFIAGLFVYVGKKYSELLDRINDHHNKQKVDALVQKMTHQVEKHGFDG
NWFLRAYDAYGHKVGSHTNDEGKIFIEPQGICVMAGIGLQNGMAKKALDHAKTMLDTPYGMVLNYPAYSTYRLELGEISS
YPEGYKENGGIFCHNNPWIACAEAVVGNGNRAFEVYKKIAPAYIEDISDIHKTEPYVYSQMIAGKEAKRHGEAKNSWLTG
TSAWNFVAISQYILGIQPEFDGLSIKPVLPDHLNELEITRKFRQNTYIIKVIRTGKQMIEYKGRIYKDHMIPYVVSNQIE
HITVHI

Sequences:

>Translated_806_residues
MKYGYFDDLNKEYVITTPYTPYPWINYLGSDDYFVLMSNTSGGYSFYKDARDRRITRYRYNNVPVDNEGKYFFIKDKESI
WNIGVKPTKTPLDSYEVRHGMGYTKFNSKKDGLVAKQLSFVPKNFNGEIHKITLENTTNETKHIELISYVEWALWNALDD
QTNFQRNLSIGEVEVDGSTIYHKTEYRERRNHYAFFHVNHDLSGFDTDREQFLGLYNDVSSPEVVREGKPKNSIADGWSP
IGSHFISVELKAHEHKDFIFMIGYVESDKFDKFESHKVINKKLAKEMIDKYKNVDQVMASFRDLNTFWHNTLSNYQIKSN
DDKLNRMVNIWNQYQTMTTFNLSRSASYFESGVGRGMGFRDSNQDLLGFMHMDSVKTRQRLIDLASTLLYDGGAYHQYSP
LTKKGNADLGSGFNDDPNWFILACVQYIKESGDFTILDEVIMYESNPNLKGSMLEHLEKAFYKTALNLGPHGLPLIGRAD
WNDCLNLNCFSDEPGESFQTVQNKGDGKTAESIFIAGLFVYVGKKYSELLDRINDHHNKQKVDALVQKMTHQVEKHGFDG
NWFLRAYDAYGHKVGSHTNDEGKIFIEPQGICVMAGIGLQNGMAKKALDHAKTMLDTPYGMVLNYPAYSTYRLELGEISS
YPEGYKENGGIFCHNNPWIACAEAVVGNGNRAFEVYKKIAPAYIEDISDIHKTEPYVYSQMIAGKEAKRHGEAKNSWLTG
TSAWNFVAISQYILGIQPEFDGLSIKPVLPDHLNELEITRKFRQNTYIIKVIRTGKQMIEYKGRIYKDHMIPYVVSNQIE
HITVHI
>Mature_806_residues
MKYGYFDDLNKEYVITTPYTPYPWINYLGSDDYFVLMSNTSGGYSFYKDARDRRITRYRYNNVPVDNEGKYFFIKDKESI
WNIGVKPTKTPLDSYEVRHGMGYTKFNSKKDGLVAKQLSFVPKNFNGEIHKITLENTTNETKHIELISYVEWALWNALDD
QTNFQRNLSIGEVEVDGSTIYHKTEYRERRNHYAFFHVNHDLSGFDTDREQFLGLYNDVSSPEVVREGKPKNSIADGWSP
IGSHFISVELKAHEHKDFIFMIGYVESDKFDKFESHKVINKKLAKEMIDKYKNVDQVMASFRDLNTFWHNTLSNYQIKSN
DDKLNRMVNIWNQYQTMTTFNLSRSASYFESGVGRGMGFRDSNQDLLGFMHMDSVKTRQRLIDLASTLLYDGGAYHQYSP
LTKKGNADLGSGFNDDPNWFILACVQYIKESGDFTILDEVIMYESNPNLKGSMLEHLEKAFYKTALNLGPHGLPLIGRAD
WNDCLNLNCFSDEPGESFQTVQNKGDGKTAESIFIAGLFVYVGKKYSELLDRINDHHNKQKVDALVQKMTHQVEKHGFDG
NWFLRAYDAYGHKVGSHTNDEGKIFIEPQGICVMAGIGLQNGMAKKALDHAKTMLDTPYGMVLNYPAYSTYRLELGEISS
YPEGYKENGGIFCHNNPWIACAEAVVGNGNRAFEVYKKIAPAYIEDISDIHKTEPYVYSQMIAGKEAKRHGEAKNSWLTG
TSAWNFVAISQYILGIQPEFDGLSIKPVLPDHLNELEITRKFRQNTYIIKVIRTGKQMIEYKGRIYKDHMIPYVVSNQIE
HITVHI

Specific function: Involved in the production of beta-(1,2)-glucan. It is involved not only in invasion but also in bacteroid development [H]

COG id: COG3459

COG function: function code G; Cellobiose phosphorylase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.tumefaciens ChvB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR009342
- InterPro:   IPR019282
- InterPro:   IPR021478
- InterPro:   IPR011013
- InterPro:   IPR010383
- InterPro:   IPR010403 [H]

Pfam domain/function: PF06204 CBM_X; PF10091 DUF2329; PF11329 DUF3131; PF06165 Glyco_transf_36; PF06205 GT36_AF [H]

EC number: NA

Molecular weight: Translated: 92671; Mature: 92671

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYGYFDDLNKEYVITTPYTPYPWINYLGSDDYFVLMSNTSGGYSFYKDARDRRITRYRY
CCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHCEEEEEEC
NNVPVDNEGKYFFIKDKESIWNIGVKPTKTPLDSYEVRHGMGYTKFNSKKDGLVAKQLSF
CCCCCCCCCCEEEEECCCHHEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHH
VPKNFNGEIHKITLENTTNETKHIELISYVEWALWNALDDQTNFQRNLSIGEVEVDGSTI
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEECCCEE
YHKTEYRERRNHYAFFHVNHDLSGFDTDREQFLGLYNDVSSPEVVREGKPKNSIADGWSP
EEHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
IGSHFISVELKAHEHKDFIFMIGYVESDKFDKFESHKVINKKLAKEMIDKYKNVDQVMAS
CCCEEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FRDLNTFWHNTLSNYQIKSNDDKLNRMVNIWNQYQTMTTFNLSRSASYFESGVGRGMGFR
HHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCC
DSNQDLLGFMHMDSVKTRQRLIDLASTLLYDGGAYHQYSPLTKKGNADLGSGFNDDPNWF
CCCCHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
ILACVQYIKESGDFTILDEVIMYESNPNLKGSMLEHLEKAFYKTALNLGPHGLPLIGRAD
HHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
WNDCLNLNCFSDEPGESFQTVQNKGDGKTAESIFIAGLFVYVGKKYSELLDRINDHHNKQ
CCCCCEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
KVDALVQKMTHQVEKHGFDGNWFLRAYDAYGHKVGSHTNDEGKIFIEPQGICVMAGIGLQ
HHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCCCCCCEEEECCCCEEEEECCCCC
NGMAKKALDHAKTMLDTPYGMVLNYPAYSTYRLELGEISSYPEGYKENGGIFCHNNPWIA
CCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCEE
CAEAVVGNGNRAFEVYKKIAPAYIEDISDIHKTEPYVYSQMIAGKEAKRHGEAKNSWLTG
EEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHCCCCCCCEECC
TSAWNFVAISQYILGIQPEFDGLSIKPVLPDHLNELEITRKFRQNTYIIKVIRTGKQMIE
CCCCCHHEEHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHH
YKGRIYKDHMIPYVVSNQIEHITVHI
HCCCEEECCCCCHHCCCCCCEEEEEC
>Mature Secondary Structure
MKYGYFDDLNKEYVITTPYTPYPWINYLGSDDYFVLMSNTSGGYSFYKDARDRRITRYRY
CCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHCEEEEEEC
NNVPVDNEGKYFFIKDKESIWNIGVKPTKTPLDSYEVRHGMGYTKFNSKKDGLVAKQLSF
CCCCCCCCCCEEEEECCCHHEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHH
VPKNFNGEIHKITLENTTNETKHIELISYVEWALWNALDDQTNFQRNLSIGEVEVDGSTI
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEECCCEE
YHKTEYRERRNHYAFFHVNHDLSGFDTDREQFLGLYNDVSSPEVVREGKPKNSIADGWSP
EEHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
IGSHFISVELKAHEHKDFIFMIGYVESDKFDKFESHKVINKKLAKEMIDKYKNVDQVMAS
CCCEEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FRDLNTFWHNTLSNYQIKSNDDKLNRMVNIWNQYQTMTTFNLSRSASYFESGVGRGMGFR
HHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCC
DSNQDLLGFMHMDSVKTRQRLIDLASTLLYDGGAYHQYSPLTKKGNADLGSGFNDDPNWF
CCCCHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
ILACVQYIKESGDFTILDEVIMYESNPNLKGSMLEHLEKAFYKTALNLGPHGLPLIGRAD
HHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
WNDCLNLNCFSDEPGESFQTVQNKGDGKTAESIFIAGLFVYVGKKYSELLDRINDHHNKQ
CCCCCEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
KVDALVQKMTHQVEKHGFDGNWFLRAYDAYGHKVGSHTNDEGKIFIEPQGICVMAGIGLQ
HHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCCCCCCEEEECCCCEEEEECCCCC
NGMAKKALDHAKTMLDTPYGMVLNYPAYSTYRLELGEISSYPEGYKENGGIFCHNNPWIA
CCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCEE
CAEAVVGNGNRAFEVYKKIAPAYIEDISDIHKTEPYVYSQMIAGKEAKRHGEAKNSWLTG
EEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHCCCCCCCEECC
TSAWNFVAISQYILGIQPEFDGLSIKPVLPDHLNELEITRKFRQNTYIIKVIRTGKQMIE
CCCCCHHEEHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHH
YKGRIYKDHMIPYVVSNQIEHITVHI
HCCCEEECCCCCHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2154461; 11481430 [H]