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The map label for this gene is yiiR [H]

Identifier: 162421850

GI number: 162421850

Start: 100252

End: 100686

Strand: Direct

Name: yiiR [H]

Synonym: YpAngola_A0097

Alternate gene names: 162421850

Gene position: 100252-100686 (Clockwise)

Preceding gene: 162419827

Following gene: 162418438

Centisome position: 2.23

GC content: 51.95

Gene sequence:

>435_bases
ATGACAATACAGCAGTGGTGTTTCTCATTTAAAGGCCGCATCGGGCGGCGAGAATTTTGGATCTGGATGGGGCTGTGGCT
ACTGGCAATGCTGGTTATTTTTACGTTGGCGGGGAAGGAGTGGCTCCCGATTCAGTCAGCCTCGTTTGCGCTTGTTTTCT
TACTGTGGCCAACGGCCGCCGTCGTCGTCAAGCGGCTACATGATCGTAATAAAGCAGGCTGGTGGGCATTGTTGGCGGTG
CTAGCCTGGATGCTGATGGCTGGAAATTGGCAGATGCTGACGCCTATTTGGCAATGGGGGGTTGGGCGATTTATCCCTAC
GCTTATTTTTGTCATGATGTTTATCGACTGCGGTGCTTTTCTTGGGACGGAAGGTGATAACCGCTTTGGCCCAGAAGCGG
TGCCAGTGAAATTTTTCGCTGATAAGGCGAAGTGA

Upstream 100 bases:

>100_bases
CAGTAGTCATTGTCAAAATTCACCGCAAAGATTATTGGTTAGTTGCGACCTTGAGGTACACTTTGCCGAAATTATGTTGG
GTAAATGGATCTGTTCATCA

Downstream 100 bases:

>100_bases
CGTTTTTAGGTTAATGGCCAAATTGAAGTTAATAACCCAATATTCGCAGCAGAGAGCAGGCAGTGCGTAATTGTAAAACA
AGCGCCCTATCGGCTTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTIQQWCFSFKGRIGRREFWIWMGLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTAAVVVKRLHDRNKAGWWALLAV
LAWMLMAGNWQMLTPIWQWGVGRFIPTLIFVMMFIDCGAFLGTEGDNRFGPEAVPVKFFADKAK

Sequences:

>Translated_144_residues
MTIQQWCFSFKGRIGRREFWIWMGLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTAAVVVKRLHDRNKAGWWALLAV
LAWMLMAGNWQMLTPIWQWGVGRFIPTLIFVMMFIDCGAFLGTEGDNRFGPEAVPVKFFADKAK
>Mature_143_residues
TIQQWCFSFKGRIGRREFWIWMGLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTAAVVVKRLHDRNKAGWWALLAVL
AWMLMAGNWQMLTPIWQWGVGRFIPTLIFVMMFIDCGAFLGTEGDNRFGPEAVPVKFFADKAK

Specific function: Unknown

COG id: COG3152

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790355, Length=142, Percent_Identity=66.1971830985916, Blast_Score=200, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008523 [H]

Pfam domain/function: PF05656 DUF805 [H]

EC number: NA

Molecular weight: Translated: 16644; Mature: 16513

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQQWCFSFKGRIGRREFWIWMGLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTAA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
VVVKRLHDRNKAGWWALLAVLAWMLMAGNWQMLTPIWQWGVGRFIPTLIFVMMFIDCGAF
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGTEGDNRFGPEAVPVKFFADKAK
HCCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
TIQQWCFSFKGRIGRREFWIWMGLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTAA
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
VVVKRLHDRNKAGWWALLAVLAWMLMAGNWQMLTPIWQWGVGRFIPTLIFVMMFIDCGAF
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGTEGDNRFGPEAVPVKFFADKAK
HCCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]