Click here to switch to the map view.

The map label for this gene is 162421192

Identifier: 162421192

GI number: 162421192

Start: 1743637

End: 1744518

Strand: Direct

Name: 162421192

Synonym: YpAngola_A1692

Alternate gene names: NA

Gene position: 1743637-1744518 (Clockwise)

Preceding gene: 162418347

Following gene: 162420140

Centisome position: 38.71

GC content: 51.47

Gene sequence:

>882_bases
ATGGCTAAAGAAATATTCTGTGCGTTTGGCGTTGATGTTGACGCGGTGGCCGGTTGGTTAGGATCTTATGGCGGTGAGGA
CTCACCCGATGATATTTCACGCGGTATGTTCTCCGGTGAAGTGGGTACGCCACGGTTGCTCAAACTCTTTGCTGACCATA
ACCTGCGGGCCACCTGGTTTATTCCGGGTCACTCAATCGAAACATTCCCTGAACAAATGAAAGCGGTAGCCGCGGCTGGA
CACGAAGTGGGGATCCATGGTTACAGCCATGAAAACCCTATCGCCATGACACCAGCGCAAGAAGAGGCCGTACTGGATCA
CTGTATCGCCCTCCTCACTCAATTGACCGGAAAATCGCCCACGGGCTATGTCGCACCTTGGTGGGAATTTAGCAACGTCA
CCAACGAGCTGTTGCTGAAAAAAGGCATTAAATATGACCACAGCCTGATGCACCACGATTTTCACCCCTACTATGTGCGC
GTCGGCGACCATTGGACCCGCATCGATTACAGCAAGTCCCCAGACCACTGGATGAAACCATTGCAACGAGGGGCCGAAAC
CGCACTGGTGGAGATCCCGGCTAACTGGTACCTGGATGATTTACCCCCCATGATGTTTATCAAGAAAGCGCCCAATAGCC
ATGGTTTTGTTAATCCCCGCCATCTGGAAGAGATGTGGCGCGATCAGTTCGACTGGGTATACCGAGAACATGATTATGCC
GTATTTACCATGACCATCCATCCTGACGTATCCGGTCGCCCGCAAGTGTTATTAATGCTGGAACGGTTGCTCAAACATAT
CCAGAGCCATCAGGATGTACGTTTCGTGACCTTTGATGAGATTGCTGACGACTACTTGCGCCGTATGCCGCGCAAAATTT
GA

Upstream 100 bases:

>100_bases
AGGCAGCCAATATTGACCTGCTACTCTGCTCCCGCGTTTTTACAACAGCACGCAAGGTGGCAACTTGCCTGCGATGAATC
GCAAACTCAGGAGAAGAACT

Downstream 100 bases:

>100_bases
TCCTGAGGCATCCTATTGAACGAGTGATAACAACCATGAACATCTATAAAAAAATATCTGCTGATGGCTGGCAGCCGCAG
CAATTAACAATCAAAGATGT

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain Protein; Hydrolase; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Polysaccharide Deacetylase Domain-Containing Protein; Deacetylase; Urate Catabolism Protein

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAKEIFCAFGVDVDAVAGWLGSYGGEDSPDDISRGMFSGEVGTPRLLKLFADHNLRATWFIPGHSIETFPEQMKAVAAAG
HEVGIHGYSHENPIAMTPAQEEAVLDHCIALLTQLTGKSPTGYVAPWWEFSNVTNELLLKKGIKYDHSLMHHDFHPYYVR
VGDHWTRIDYSKSPDHWMKPLQRGAETALVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHDYA
VFTMTIHPDVSGRPQVLLMLERLLKHIQSHQDVRFVTFDEIADDYLRRMPRKI

Sequences:

>Translated_293_residues
MAKEIFCAFGVDVDAVAGWLGSYGGEDSPDDISRGMFSGEVGTPRLLKLFADHNLRATWFIPGHSIETFPEQMKAVAAAG
HEVGIHGYSHENPIAMTPAQEEAVLDHCIALLTQLTGKSPTGYVAPWWEFSNVTNELLLKKGIKYDHSLMHHDFHPYYVR
VGDHWTRIDYSKSPDHWMKPLQRGAETALVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHDYA
VFTMTIHPDVSGRPQVLLMLERLLKHIQSHQDVRFVTFDEIADDYLRRMPRKI
>Mature_292_residues
AKEIFCAFGVDVDAVAGWLGSYGGEDSPDDISRGMFSGEVGTPRLLKLFADHNLRATWFIPGHSIETFPEQMKAVAAAGH
EVGIHGYSHENPIAMTPAQEEAVLDHCIALLTQLTGKSPTGYVAPWWEFSNVTNELLLKKGIKYDHSLMHHDFHPYYVRV
GDHWTRIDYSKSPDHWMKPLQRGAETALVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHDYAV
FTMTIHPDVSGRPQVLLMLERLLKHIQSHQDVRFVTFDEIADDYLRRMPRKI

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33740; Mature: 33609

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEIFCAFGVDVDAVAGWLGSYGGEDSPDDISRGMFSGEVGTPRLLKLFADHNLRATWF
CCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEE
IPGHSIETFPEQMKAVAAAGHEVGIHGYSHENPIAMTPAQEEAVLDHCIALLTQLTGKSP
ECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCC
TGYVAPWWEFSNVTNELLLKKGIKYDHSLMHHDFHPYYVRVGDHWTRIDYSKSPDHWMKP
CCCEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCEEEEECCCCCCHHHHHH
LQRGAETALVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHDYA
HHCCCCEEEEEECCCCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHEEECCEE
VFTMTIHPDVSGRPQVLLMLERLLKHIQSHQDVRFVTFDEIADDYLRRMPRKI
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKEIFCAFGVDVDAVAGWLGSYGGEDSPDDISRGMFSGEVGTPRLLKLFADHNLRATWF
CCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEE
IPGHSIETFPEQMKAVAAAGHEVGIHGYSHENPIAMTPAQEEAVLDHCIALLTQLTGKSP
ECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCC
TGYVAPWWEFSNVTNELLLKKGIKYDHSLMHHDFHPYYVRVGDHWTRIDYSKSPDHWMKP
CCCEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCEEEEECCCCCCHHHHHH
LQRGAETALVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHDYA
HHCCCCEEEEEECCCCCCCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHEEECCEE
VFTMTIHPDVSGRPQVLLMLERLLKHIQSHQDVRFVTFDEIADDYLRRMPRKI
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA