| Definition | Yersinia pestis Angola, complete genome. |
|---|---|
| Accession | NC_010159 |
| Length | 4,504,254 |
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The map label for this gene is 162420957
Identifier: 162420957
GI number: 162420957
Start: 1969273
End: 1969803
Strand: Direct
Name: 162420957
Synonym: YpAngola_A1895
Alternate gene names: NA
Gene position: 1969273-1969803 (Clockwise)
Preceding gene: 162419050
Following gene: 162421767
Centisome position: 43.72
GC content: 45.57
Gene sequence:
>531_bases ATGCTTAAGAGAAAATGGCTCAGCATCGCGGTTATTATCGTTGCCCTGATCATGGTGAATATCTCTATTTATCAGAAACA ACATTTGTTGGCTAAAGGTGACATCATTATTCTGGAACTGGCCCCGGTGGATCCCCGCTCATTGATGCAGGGTGATTATA TGGCGCTGAGTTATGCCCTTGTAGCGCCATTCAATGAACAATTCAATGCAGAACAAGAAAAATGCAGAGAAGAGCCTTTA CTACTTTGTCCTGAGTCCAAAAGGCGGCTAATTGTTGAACTCGACGATCGCCAGCGGGCCACAGCGGCCAGAATTGATCA GGGCGAGCCTCTGGCAGATAACCAACATTATTTACAATACCGCTTTAAAGGCAGGTCTATTCAGATAGGAACGGATGCCT ATTTTTTCCAGGAAGGACATGCAGAAGATTACGTCAATGCACGCTACGGTGAGTTTCGTGTTGCTAAAGATGGTTCGGCG TTGCTGACCCATTTACTGGATGCCGATTTGCAGCGCATAGAGAATAAGTAA
Upstream 100 bases:
>100_bases TGTTGTATAAATCATTGTTATTAATTGGGGGGGGGTGTCTTGCTGCTGGTTTTGGCCGGCGTATTGAATCGAGTACTCTC TGCTGGGGAGGTCAATCAAC
Downstream 100 bases:
>100_bases TCCTTAAACAATAAAAAAGAACCGTCTGGCCCCATGCCAACCCGTTATCGCGCTTATATTCACGGATGGTATACCCCCGT ATTGATGGGGGTATACCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MLKRKWLSIAVIIVALIMVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYALVAPFNEQFNAEQEKCREEPL LLCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQYRFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSA LLTHLLDADLQRIENK
Sequences:
>Translated_176_residues MLKRKWLSIAVIIVALIMVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYALVAPFNEQFNAEQEKCREEPL LLCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQYRFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSA LLTHLLDADLQRIENK >Mature_176_residues MLKRKWLSIAVIIVALIMVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYALVAPFNEQFNAEQEKCREEPL LLCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQYRFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSA LLTHLLDADLQRIENK
Specific function: Unknown
COG id: COG4929
COG function: function code S; Uncharacterized membrane-anchored protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20237; Mature: 20237
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRKWLSIAVIIVALIMVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHHCCCHHHEEEEE VAPFNEQFNAEQEKCREEPLLLCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQY ECCCCHHCCCHHHHHHCCCEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEEEE RFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSALLTHLLDADLQRIENK EECCCEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKRKWLSIAVIIVALIMVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHHCCCHHHEEEEE VAPFNEQFNAEQEKCREEPLLLCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQY ECCCCHHCCCHHHHHHCCCEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEEEE RFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSALLTHLLDADLQRIENK EECCCEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA