Click here to switch to the map view.

The map label for this gene is prmA [H]

Identifier: 162420605

GI number: 162420605

Start: 1257988

End: 1258908

Strand: Direct

Name: prmA [H]

Synonym: YpAngola_A1210

Alternate gene names: 162420605

Gene position: 1257988-1258908 (Clockwise)

Preceding gene: 162419202

Following gene: 162420960

Centisome position: 27.93

GC content: 53.2

Gene sequence:

>921_bases
GTGGTTATGGCCCCGATACCGGCGCTTGAGAGAATTGCTATGCCTTGGATCCAACTAAAATTAAACACCACCGGCAACCA
AGCCGAATCCCTAGGGGACGTTCTGGTAGAAAGTGGTGCTGTGTCGGTCACTTTTCAGGACACCCACGATAATCCGGTCT
TCGAGCCACTGCCTGGTGAAACCCGTCTGTGGGGCGATACCGATGTCATTGGCCTGTATGATGCAGAAACCGATATGGCT
GACGTGGTCGCCATGTTGGAATGCCACCCGCAGATCGGCAAAGGCTTTATCCATAAAATTGAACAGTTGGAAGATAAAGA
TTGGGAACGTGAATGGATGGATAACTTCCATCCGATGCGTTTTGGTGAGCGCCTGTGGATCTGCCCAAGCTGGCGTGATG
TGCCAGATCCAACGGCGGTTAACGTTATGCTCGACCCCGGCTTAGCCTTTGGTACGGGTACCCACCCTACCACAGCACTA
TGCTTACAATGGCTAGATAGCCTCGATCTCAATGGTAAAACCCTCATCGATTTCGGTTGTGGCTCTGGCATCCTGGCGAT
TGCCGCGCTAAAGCTCGGTGCAGCGCGCGCTATTGGCATTGATATCGATCCGCAGGCCATTCAAGCCAGTCGCGATAACG
CGCAGCGTAACGGCGTTTCAGAGCGTTTGGAGCTGTATCTGGCAAAAGACCAGCCCGCAGAACTATCTGCTGACGTGGTC
GTGGCCAATATTCTGGCAGGCCCATTACGGGAACTGGCACCACTGATTAGCGTTTTACCGACGACGGGCGGCCATCTTGG
GTTGTCTGGGGTATTAGCAACACAAGCGGCGGGCGTCGCACAGGCCTATGAGGATAAATTCATTCTCGACCCAGTCGCCG
AGAAAGAAGAATGGTGCCGCATTACCGGTATCAAAAAATAA

Upstream 100 bases:

>100_bases
TATCGGTAATCTGTTTGGCGACAGAGCGCGGGCGCGACACCCCGCCATCGTCAGTGCCGATTAACATCACTATTACTCTA
TCAACACATCAGCCGGTATC

Downstream 100 bases:

>100_bases
TTTTGCCTTAACTGACGCACACGGACTTGAGTCCGTGTGCGTCACAACTCACCTTTCAACGCCAGCCACCTTTCATCATC
AACAATATTTCTGTATCGAT

Product: ribosomal protein L11 methyltransferase

Products: NA

Alternate protein names: L11 Mtase [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MVMAPIPALERIAMPWIQLKLNTTGNQAESLGDVLVESGAVSVTFQDTHDNPVFEPLPGETRLWGDTDVIGLYDAETDMA
DVVAMLECHPQIGKGFIHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRDVPDPTAVNVMLDPGLAFGTGTHPTTAL
CLQWLDSLDLNGKTLIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPAELSADVV
VANILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQAYEDKFILDPVAEKEEWCRITGIKK

Sequences:

>Translated_306_residues
MVMAPIPALERIAMPWIQLKLNTTGNQAESLGDVLVESGAVSVTFQDTHDNPVFEPLPGETRLWGDTDVIGLYDAETDMA
DVVAMLECHPQIGKGFIHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRDVPDPTAVNVMLDPGLAFGTGTHPTTAL
CLQWLDSLDLNGKTLIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPAELSADVV
VANILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQAYEDKFILDPVAEKEEWCRITGIKK
>Mature_306_residues
MVMAPIPALERIAMPWIQLKLNTTGNQAESLGDVLVESGAVSVTFQDTHDNPVFEPLPGETRLWGDTDVIGLYDAETDMA
DVVAMLECHPQIGKGFIHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRDVPDPTAVNVMLDPGLAFGTGTHPTTAL
CLQWLDSLDLNGKTLIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPAELSADVV
VANILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQAYEDKFILDPVAEKEEWCRITGIKK

Specific function: Methylates ribosomal protein L11 [H]

COG id: COG2264

COG function: function code J; Ribosomal protein L11 methylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]

Homologues:

Organism=Escherichia coli, GI2367208, Length=293, Percent_Identity=84.9829351535836, Blast_Score=479, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010456
- InterPro:   IPR004498 [H]

Pfam domain/function: PF06325 PrmA [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 33242; Mature: 33242

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMAPIPALERIAMPWIQLKLNTTGNQAESLGDVLVESGAVSVTFQDTHDNPVFEPLPGE
CCCCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC
TRLWGDTDVIGLYDAETDMADVVAMLECHPQIGKGFIHKIEQLEDKDWEREWMDNFHPMR
CEECCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
FGERLWICPSWRDVPDPTAVNVMLDPGLAFGTGTHPTTALCLQWLDSLDLNGKTLIDFGC
CCCEEEECCCCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC
GSGILAIAALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPAELSADVV
CCHHHHHHHHHHCCCEEEECCCCHHHHHCCHHHHHHCCHHHHEEEEEECCCCCCCCHHHH
VANILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQAYEDKFILDPVAEKEEWCR
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHH
ITGIKK
CCCCCC
>Mature Secondary Structure
MVMAPIPALERIAMPWIQLKLNTTGNQAESLGDVLVESGAVSVTFQDTHDNPVFEPLPGE
CCCCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC
TRLWGDTDVIGLYDAETDMADVVAMLECHPQIGKGFIHKIEQLEDKDWEREWMDNFHPMR
CEECCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
FGERLWICPSWRDVPDPTAVNVMLDPGLAFGTGTHPTTALCLQWLDSLDLNGKTLIDFGC
CCCEEEECCCCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC
GSGILAIAALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPAELSADVV
CCHHHHHHHHHHCCCEEEECCCCHHHHHCCHHHHHHCCHHHHEEEEEECCCCCCCCHHHH
VANILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQAYEDKFILDPVAEKEEWCR
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHH
ITGIKK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]

General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA