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The map label for this gene is 162420199

Identifier: 162420199

GI number: 162420199

Start: 2392363

End: 2394387

Strand: Direct

Name: 162420199

Synonym: YpAngola_A2284

Alternate gene names: NA

Gene position: 2392363-2394387 (Clockwise)

Preceding gene: 162419755

Following gene: 162421268

Centisome position: 53.11

GC content: 47.31

Gene sequence:

>2025_bases
ATGCCGGAGGATATTTATTCGTTGGATGAGCAACAGATTACCGAACATCTACGGCAGTTGATGATGCATAGGCGGCCAAT
CATTAACGCTGGGATCAATAGCGATGATGTGATTGCACTTTGGGACTCCCTTGCCCACCACGACACACAACGCCAGAAAG
AACTGGCGACTCACTTCTGGCCTACCGCGATTGAACTGGCACCGTATCTGAGTATTGATGACCGGGCCAAATTATTTTCG
TTATTGTGGGGAGAAAACGATCCACTCACTGACGCTTATCGCCATTTTTCCTATATTTTACAGCACCTTAGCGGCACACG
GAAATTATTAGCACCGCTAAGTGTTTTGGTTGACGATACCCTGTTACCTGCCAATGGTGTCATGAATATTGCCACGCTTG
GTGACTTGAATACACCTGCAGATAACCCTATCCAAGTGCTTCCCTTGATCAACGGTCATACCGCGAAATGCGTGACACTG
TCACAAGCGGAATTGACGCTGTTAGCGGTGGAACTGAAGATCCCACTCGATAAACCCGCGCGTGAAAGTGCATTTGAATC
CGTTGAATTGCTTAATTTTCCTGATGCTCGCGGTTCACAAACTATCCCGGCATTAATGGAAAACGCCGCTTATCCGCTGG
CCTCGCTACTGTCACAGGCTAAAAATGCCTATTTACTCGAACGTTATACCAACCAACAGCAAATCAACCTGTTATTGGTG
TGTACCGCCACCGATCAGCGTTCAGAGATAAAAAGTACCAGCAAGGCATTGGATTATTGGGTTAAACAGACTCAGGGAGA
GAGCGTTCAGATACGCTCGCGTCGTAATCCGGGTTTAATCTGGGCCTTAACGCCCCATGATCAGCGCATTACCGCGAATC
TACCTCTCTCCACCCCGACAGACGCCCAAACGCATGACGCGAATATCAAAAATTACGATGAAGCGGTACAACGCTATGTT
GGTAATCCCGGTGACAGTTGGGGAACCCTATTGGCATTGGATGCACGTGGGGTTGAACGGATGATCTCGTACCTATCGAA
AGAAATCCTTCGGGATATCAAATCAGAACGTCTAACCGAACAACTTCACGAGTTACAACGGGAACTGACCAATAATCTGT
TCACGGGTTGGTATCAACCTTCGGTTACGGACGAACGACAGCAAAAACAACGTATTGTAGAAATATTACTTAAAGCGTTG
CAAACCCGTACTGGGGTACATGGTGAATTGTTGGAGCAATTACTTCCTTCCCGCGATGAACTACGCCGCCTTTATCTGCA
ACAGCACCTTTATCTATCACCCCGCCTTTATCAACAAGAGAAAAAAGGGGTTGCGGATTTTTTCATACCACTCGCCAGCA
CTGAACCTTTCAGTATCGGTATCGATATCGATCTGTTTAGTGACCTTCCCACTCCCACTGAGCCATCGCTGACACCACAA
GCCAGACATGATAACGATGAAGCGGAGTATGCCGCTCATGTGCATTATTATTGGATAAATCATCTACGCCAACTGCCCGA
TAATACTGCGCTACTTGAATTACTGGGCGTCACTAAACCCACGATAGAACTGCTGGTCGCGGAATTCATCACTGCCAGTA
TTCGGCTGGATATTGCTAGGAATTTACGACAGGCACTGGCTGATAACGAACCGGCGGATCTGCATCGTGCAGCCAAAGCG
GACCGTCAGGTTTCTCGTGCGCTCACTGTACTCGGTGATTTCATTGCCTGGTTAGGTTTTTTGCAAATCAGCGAAGATAA
GCGCCCGAATAGCCGCATCAACCGAGGGTATAAAATTTTTGCCCAGCCCCCTAAATCAGTATCAACTTTAGGGGTCTCTC
ACCGGTTAACGCAACTGGCATTAACCCCAACCAACAGTACCGCATTTTATATCTATGATTGGTTAGTGGGTTTGGGTGAA
ATGATTATTCAAAACGTGGGATATTCAGCCAGTAATGAGATAAGCCCGGCACAGCGGCAACAACTGGCGGCAATATTATC
GGTGATAAAACCCGCAAATGATTAA

Upstream 100 bases:

>100_bases
GCCGTAAGTAATCCATAGATGCAAATGTCAGATCGCGATGCGCCTGTTAGGGCGCGGCTGGTAACAGAGCCTTATAGGCG
CATATGAAAAACCTCCGGCT

Downstream 100 bases:

>100_bases
ATAGACGGCTGATAACGTTAAATAAAGGGGAACGTGCCACAAAAATGCGCAACTCCCCGACGGAGAAGCGCATTTTTTAA
ACAGCAGAACTCAAGTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: Virulence Factor SrfC-Like Protein; Virulence Effector SrfC; Virulence Factor SrfC; Virulence Protein; Virulence Effector Protein; Virulence Factor Protein; Type III Secretion System Effector; HopL1 Protein; Protein Conserved In Bacteria Virulence Factor; Type III Effector Protein; Coiled-Coil Structure

Number of amino acids: Translated: 674; Mature: 673

Protein sequence:

>674_residues
MPEDIYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAPYLSIDDRAKLFS
LLWGENDPLTDAYRHFSYILQHLSGTRKLLAPLSVLVDDTLLPANGVMNIATLGDLNTPADNPIQVLPLINGHTAKCVTL
SQAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLERYTNQQQINLLLV
CTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDANIKNYDEAVQRYV
GNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFTGWYQPSVTDERQQKQRIVEILLKAL
QTRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFIPLASTEPFSIGIDIDLFSDLPTPTEPSLTPQ
ARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIARNLRQALADNEPADLHRAAKA
DRQVSRALTVLGDFIAWLGFLQISEDKRPNSRINRGYKIFAQPPKSVSTLGVSHRLTQLALTPTNSTAFYIYDWLVGLGE
MIIQNVGYSASNEISPAQRQQLAAILSVIKPAND

Sequences:

>Translated_674_residues
MPEDIYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAPYLSIDDRAKLFS
LLWGENDPLTDAYRHFSYILQHLSGTRKLLAPLSVLVDDTLLPANGVMNIATLGDLNTPADNPIQVLPLINGHTAKCVTL
SQAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLERYTNQQQINLLLV
CTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDANIKNYDEAVQRYV
GNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFTGWYQPSVTDERQQKQRIVEILLKAL
QTRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFIPLASTEPFSIGIDIDLFSDLPTPTEPSLTPQ
ARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIARNLRQALADNEPADLHRAAKA
DRQVSRALTVLGDFIAWLGFLQISEDKRPNSRINRGYKIFAQPPKSVSTLGVSHRLTQLALTPTNSTAFYIYDWLVGLGE
MIIQNVGYSASNEISPAQRQQLAAILSVIKPAND
>Mature_673_residues
PEDIYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAPYLSIDDRAKLFSL
LWGENDPLTDAYRHFSYILQHLSGTRKLLAPLSVLVDDTLLPANGVMNIATLGDLNTPADNPIQVLPLINGHTAKCVTLS
QAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLERYTNQQQINLLLVC
TATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDANIKNYDEAVQRYVG
NPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFTGWYQPSVTDERQQKQRIVEILLKALQ
TRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFIPLASTEPFSIGIDIDLFSDLPTPTEPSLTPQA
RHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIARNLRQALADNEPADLHRAAKAD
RQVSRALTVLGDFIAWLGFLQISEDKRPNSRINRGYKIFAQPPKSVSTLGVSHRLTQLALTPTNSTAFYIYDWLVGLGEM
IIQNVGYSASNEISPAQRQQLAAILSVIKPAND

Specific function: Unknown

COG id: COG4458

COG function: function code S; Uncharacterized protein conserved in bacteria, putative virulence factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76039; Mature: 75908

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEDIYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFW
CCCHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PTAIELAPYLSIDDRAKLFSLLWGENDPLTDAYRHFSYILQHLSGTRKLLAPLSVLVDDT
CHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
LLPANGVMNIATLGDLNTPADNPIQVLPLINGHTAKCVTLSQAELTLLAVELKIPLDKPA
CCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCH
RESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLERYTNQQQINLLLV
HHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCEEEEEEE
CTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPT
EECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCC
DAQTHDANIKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTE
CCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
QLHELQRELTNNLFTGWYQPSVTDERQQKQRIVEILLKALQTRTGVHGELLEQLLPSRDE
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH
LRRLYLQQHLYLSPRLYQQEKKGVADFFIPLASTEPFSIGIDIDLFSDLPTPTEPSLTPQ
HHHHHHHHHHHCCCHHHHHHHCCHHHHEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCC
ARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAR
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NLRQALADNEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPNSRINRGYKIF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEE
AQPPKSVSTLGVSHRLTQLALTPTNSTAFYIYDWLVGLGEMIIQNVGYSASNEISPAQRQ
ECCCCHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
QLAAILSVIKPAND
HHHHHHHHHCCCCC
>Mature Secondary Structure 
PEDIYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFW
CCHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PTAIELAPYLSIDDRAKLFSLLWGENDPLTDAYRHFSYILQHLSGTRKLLAPLSVLVDDT
CHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
LLPANGVMNIATLGDLNTPADNPIQVLPLINGHTAKCVTLSQAELTLLAVELKIPLDKPA
CCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCH
RESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLERYTNQQQINLLLV
HHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCEEEEEEE
CTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPT
EECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCC
DAQTHDANIKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTE
CCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
QLHELQRELTNNLFTGWYQPSVTDERQQKQRIVEILLKALQTRTGVHGELLEQLLPSRDE
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH
LRRLYLQQHLYLSPRLYQQEKKGVADFFIPLASTEPFSIGIDIDLFSDLPTPTEPSLTPQ
HHHHHHHHHHHCCCHHHHHHHCCHHHHEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCC
ARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAR
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NLRQALADNEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPNSRINRGYKIF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEE
AQPPKSVSTLGVSHRLTQLALTPTNSTAFYIYDWLVGLGEMIIQNVGYSASNEISPAQRQ
ECCCCHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
QLAAILSVIKPAND
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA