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The map label for this gene is dcyD [H]

Identifier: 162420161

GI number: 162420161

Start: 2116975

End: 2117994

Strand: Direct

Name: dcyD [H]

Synonym: YpAngola_A2030

Alternate gene names: 162420161

Gene position: 2116975-2117994 (Clockwise)

Preceding gene: 162421156

Following gene: 162420780

Centisome position: 47.0

GC content: 51.18

Gene sequence:

>1020_bases
ATGATTCATCAATTCCTTGGGGGGCACGTGACGCTTCAACAAAAACTGACGCAATTCCCGCGTCTCGATCTGGTCGGTAA
TGCGACGCCATTAGAAAAACTGTCTCGTCTATCTGATTATCTGGGACGTGAAATTTACATTAAACGTGATGATGTCACGC
CTGTGGCGCTTGGCGGGAATAAACTGCGCAAGCTAGAATTCTTAGCCGCAGATGCCTTGAGACAGGGAGCCGATACGCTG
GTTACGGCTGGTGCTATTCAATCTAATCATGTCCGCCAAACCGCCGCCGTGGCCGCGAAACTGGGGCTGCATTGCGTTGC
GCTGTTGGAAAACCCCATTGGTACTGAGCAGGCAAACTATCTGACCAATGGGAACCGGCTGTTACTGGACCTATTCAATG
TTGATGTTGTGATGTGTGAGGCATTGAACGATCCAAATCAGCAATTAGCAGAATTGGCTACCCGCGTGGAAGCGCAGGGT
TTCCGCCCATATGTGGTACCGATTGGCGGTTCTAATGCCTTGGGCGCGCTGGGTTATGTGCAGTGCTCACTGGAAATTGC
TGCTCAAGCCGCGGGCAATGTTGCGTTTAGTTCGGTCGTCGTGGCCTCTGGCAGTGCGGGAACACATGCAGGATTGGCGG
TTGGTCTACAGCAGTTGTTACCCGATGCGGAATTAATCGGTGTGACGGTATCACGTAGTGCCGATGAACAGCGGCCTAAA
GTGGCACAGATTCAACAAGCGTTGGCGACATCATTAGGGATGACGGACCCATTGGCAAAAATCACCTTGTGGGATAGTTA
TTTTGCCCCGCAATATGGGATGCCAAACGAAGAGGGGATAGCGGCTATTAAGCTCTTGGCAAGACTGGAAGGAATATTGT
TGGACCCTGTGTATACCGGTAAGGCGATGGCGGGCTTACTTGATGGTATTGAACAGCAAAAATTCTGCGACAAAGGGCCA
ATTTTATTTATCCACACTGGCGGGGCACCTGCGCTGTTTGCTTATCATCCGCAGGTGTAG

Upstream 100 bases:

>100_bases
AGTTATTCCCATTAAGCTATCCCCTGCGATATTGGTCACTGACATCACTCATAAAATCAGTGCTTATTAATGTCACATCT
GATAAATCTATATAAAAGCC

Downstream 100 bases:

>100_bases
CCTAAGCTTTCATTATTACTTATTCCATTTTTAACTATATTTATCATTTTATATTTCTTCACTTCATTAATAGCACTGGT
AAAGTGTTGAATATCAAAAA

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MIHQFLGGHVTLQQKLTQFPRLDLVGNATPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTL
VTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTEQANYLTNGNRLLLDLFNVDVVMCEALNDPNQQLAELATRVEAQG
FRPYVVPIGGSNALGALGYVQCSLEIAAQAAGNVAFSSVVVASGSAGTHAGLAVGLQQLLPDAELIGVTVSRSADEQRPK
VAQIQQALATSLGMTDPLAKITLWDSYFAPQYGMPNEEGIAAIKLLARLEGILLDPVYTGKAMAGLLDGIEQQKFCDKGP
ILFIHTGGAPALFAYHPQV

Sequences:

>Translated_339_residues
MIHQFLGGHVTLQQKLTQFPRLDLVGNATPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTL
VTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTEQANYLTNGNRLLLDLFNVDVVMCEALNDPNQQLAELATRVEAQG
FRPYVVPIGGSNALGALGYVQCSLEIAAQAAGNVAFSSVVVASGSAGTHAGLAVGLQQLLPDAELIGVTVSRSADEQRPK
VAQIQQALATSLGMTDPLAKITLWDSYFAPQYGMPNEEGIAAIKLLARLEGILLDPVYTGKAMAGLLDGIEQQKFCDKGP
ILFIHTGGAPALFAYHPQV
>Mature_339_residues
MIHQFLGGHVTLQQKLTQFPRLDLVGNATPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTL
VTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTEQANYLTNGNRLLLDLFNVDVVMCEALNDPNQQLAELATRVEAQG
FRPYVVPIGGSNALGALGYVQCSLEIAAQAAGNVAFSSVVVASGSAGTHAGLAVGLQQLLPDAELIGVTVSRSADEQRPK
VAQIQQALATSLGMTDPLAKITLWDSYFAPQYGMPNEEGIAAIKLLARLEGILLDPVYTGKAMAGLLDGIEQQKFCDKGP
ILFIHTGGAPALFAYHPQV

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=326, Percent_Identity=77.3006134969325, Blast_Score=518, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 36029; Mature: 36029

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHQFLGGHVTLQQKLTQFPRLDLVGNATPLEKLSRLSDYLGREIYIKRDDVTPVALGGN
CCCCCCCCCEEHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEECCC
KLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTEQANY
HHHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
LTNGNRLLLDLFNVDVVMCEALNDPNQQLAELATRVEAQGFRPYVVPIGGSNALGALGYV
EECCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHE
QCSLEIAAQAAGNVAFSSVVVASGSAGTHAGLAVGLQQLLPDAELIGVTVSRSADEQRPK
EEHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCH
VAQIQQALATSLGMTDPLAKITLWDSYFAPQYGMPNEEGIAAIKLLARLEGILLDPVYTG
HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCC
KAMAGLLDGIEQQKFCDKGPILFIHTGGAPALFAYHPQV
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCC
>Mature Secondary Structure
MIHQFLGGHVTLQQKLTQFPRLDLVGNATPLEKLSRLSDYLGREIYIKRDDVTPVALGGN
CCCCCCCCCEEHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEECCC
KLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTEQANY
HHHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
LTNGNRLLLDLFNVDVVMCEALNDPNQQLAELATRVEAQGFRPYVVPIGGSNALGALGYV
EECCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHE
QCSLEIAAQAAGNVAFSSVVVASGSAGTHAGLAVGLQQLLPDAELIGVTVSRSADEQRPK
EEHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCH
VAQIQQALATSLGMTDPLAKITLWDSYFAPQYGMPNEEGIAAIKLLARLEGILLDPVYTG
HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCC
KAMAGLLDGIEQQKFCDKGPILFIHTGGAPALFAYHPQV
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]