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The map label for this gene is rhaB [H]

Identifier: 162419959

GI number: 162419959

Start: 754448

End: 755905

Strand: Direct

Name: rhaB [H]

Synonym: YpAngola_A0743

Alternate gene names: 162419959

Gene position: 754448-755905 (Clockwise)

Preceding gene: 162420016

Following gene: 162418109

Centisome position: 16.75

GC content: 53.29

Gene sequence:

>1458_bases
ATGGTTGCTATTGACCTTGGCGCGTCCAGCGGACGGGTGATGCTGGCAAGTTATTATCCCGGTCAGCAACAGCTTACGTT
GCGGGAAGTCTGCCGCTTTACCAACCAGATTAAATCTATTGATGGCTCCGATGTCTGGGATATCGATGCCATTGAACAAT
CTATCCGTGAGGGACTGAGCCAACTCGACAGTGAAGGGATAGCGCTGGACAGCATCGGTATTGATAGCTGGGGAGTTGAT
TTTGTTTTGCTTGATAAGCAAGGGAAACGGATCGGACAGCCCGTATATTACCGTGATAGTCGTACGCAGGGAGTGATGGC
GCGGGCGCAGCAGACGCTGGGTAGCAATGCGATTTATCGCCGCACCGGTATTCAGTTCTTGCCGTTCAATACGCTGTATC
AACTGCGGGCATTAAGTGAACAACAACCTCACTTACTCGCCGATGTTGCCCACCTATTATTGATCCCAGACTATTTGCAT
TACCGCCTTACCGGCCAGCTAAACTGGGAATATACCAATGCCAGTACTACCCAGTTGCTCAACATCGAAACCGGCGATTG
GGATAGCGATTTACTGGCCTATGCCGGCGTACCGGCCCATTGGTTTGCCAAACCCGGCAAACCTGGCAATACCATCGGCT
ATTGGCACAGCGCCAACGGTCAGCAGGTTCCGGTGGTGGCCGTTGCCACCCATGACACGGCTAGCGCGGTTCTTGCCGCC
CCGCTTATTGATGCTGATGCTGCCTATCTTAGCTCCGGTACCTGGTCACTTATGGGCTTCGAAAGCGGTACACCACTCAC
CCACCAGCAGGCGCAGTGCAGCAATATCACCAACGAAGGGGGCGCTGAAGGCCGCTACCGCGTACTCAAAAATATTATGG
GTCTGTGGCTACTGCAACGGGCGACGGATGAATTGCAGATTGACGATTTACCGCAGCTTATTGAGCAAGCGGCACGACAA
CCCGCTTGCCGCTCGCTGATCAATCCCAATGACAGCCGTTTTATTAATCCACCCAATATGTGCCGTGAGATCCAAAACGC
CTGCCGTGAACATCAGTTCCCCGTGCCGAACACGGCCGCCCAACTGGCCCGCTGTATCTTTGATAGCCTCGCCATGTTGT
ACCGGCAAGTGGCTCAAGAATTGGCAACACTCCGCGGACGCCCAATCAGCCACTTGCATATCGTCGGTGGCGGCTGTCAG
AACCAATTTCTGAATCAACTGTGTGCCGATGCCTGTGGCTTGAATGTAAGCATGGGGCCGGTTGAGGCCTCCACGCTCGG
CAATATTGGTAGCCAATTAATCTCGCTGGGTGAGGTCGCTGATGTCACCCATTACCGCCGTATCGTGGCGAATAACTTCC
CATTGCACCATTTATCCCCTCACGACAATTCGGACTTTGCTGCCCATTGGCTGCAATTCCAGTCACTGAGTCAATTACCT
AAGGAACTTTGCATATGA

Upstream 100 bases:

>100_bases
CACACCATCTACATGTTCGCCATCTACATATGCACAACCCATATGTTCACAACCCACATGTTCACCATCGGCAGTCACAT
CGCCAAAAGCTGCACGGCAC

Downstream 100 bases:

>100_bases
CGAACTCTATTGAACAGGCCTGGGATCTGGCTAAACAGCGTTTTGCCGCTGTCGGCGTTGATGTTGATGCCGCACTCACC
CGTCTTGATACGCTACCGGT

Product: rhamnulokinase

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MVAIDLGASSGRVMLASYYPGQQQLTLREVCRFTNQIKSIDGSDVWDIDAIEQSIREGLSQLDSEGIALDSIGIDSWGVD
FVLLDKQGKRIGQPVYYRDSRTQGVMARAQQTLGSNAIYRRTGIQFLPFNTLYQLRALSEQQPHLLADVAHLLLIPDYLH
YRLTGQLNWEYTNASTTQLLNIETGDWDSDLLAYAGVPAHWFAKPGKPGNTIGYWHSANGQQVPVVAVATHDTASAVLAA
PLIDADAAYLSSGTWSLMGFESGTPLTHQQAQCSNITNEGGAEGRYRVLKNIMGLWLLQRATDELQIDDLPQLIEQAARQ
PACRSLINPNDSRFINPPNMCREIQNACREHQFPVPNTAAQLARCIFDSLAMLYRQVAQELATLRGRPISHLHIVGGGCQ
NQFLNQLCADACGLNVSMGPVEASTLGNIGSQLISLGEVADVTHYRRIVANNFPLHHLSPHDNSDFAAHWLQFQSLSQLP
KELCI

Sequences:

>Translated_485_residues
MVAIDLGASSGRVMLASYYPGQQQLTLREVCRFTNQIKSIDGSDVWDIDAIEQSIREGLSQLDSEGIALDSIGIDSWGVD
FVLLDKQGKRIGQPVYYRDSRTQGVMARAQQTLGSNAIYRRTGIQFLPFNTLYQLRALSEQQPHLLADVAHLLLIPDYLH
YRLTGQLNWEYTNASTTQLLNIETGDWDSDLLAYAGVPAHWFAKPGKPGNTIGYWHSANGQQVPVVAVATHDTASAVLAA
PLIDADAAYLSSGTWSLMGFESGTPLTHQQAQCSNITNEGGAEGRYRVLKNIMGLWLLQRATDELQIDDLPQLIEQAARQ
PACRSLINPNDSRFINPPNMCREIQNACREHQFPVPNTAAQLARCIFDSLAMLYRQVAQELATLRGRPISHLHIVGGGCQ
NQFLNQLCADACGLNVSMGPVEASTLGNIGSQLISLGEVADVTHYRRIVANNFPLHHLSPHDNSDFAAHWLQFQSLSQLP
KELCI
>Mature_485_residues
MVAIDLGASSGRVMLASYYPGQQQLTLREVCRFTNQIKSIDGSDVWDIDAIEQSIREGLSQLDSEGIALDSIGIDSWGVD
FVLLDKQGKRIGQPVYYRDSRTQGVMARAQQTLGSNAIYRRTGIQFLPFNTLYQLRALSEQQPHLLADVAHLLLIPDYLH
YRLTGQLNWEYTNASTTQLLNIETGDWDSDLLAYAGVPAHWFAKPGKPGNTIGYWHSANGQQVPVVAVATHDTASAVLAA
PLIDADAAYLSSGTWSLMGFESGTPLTHQQAQCSNITNEGGAEGRYRVLKNIMGLWLLQRATDELQIDDLPQLIEQAARQ
PACRSLINPNDSRFINPPNMCREIQNACREHQFPVPNTAAQLARCIFDSLAMLYRQVAQELATLRGRPISHLHIVGGGCQ
NQFLNQLCADACGLNVSMGPVEASTLGNIGSQLISLGEVADVTHYRRIVANNFPLHHLSPHDNSDFAAHWLQFQSLSQLP
KELCI

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=483, Percent_Identity=62.9399585921325, Blast_Score=624, Evalue=1e-180,
Organism=Escherichia coli, GI1789168, Length=383, Percent_Identity=26.3707571801567, Blast_Score=108, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 53501; Mature: 53501

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAIDLGASSGRVMLASYYPGQQQLTLREVCRFTNQIKSIDGSDVWDIDAIEQSIREGLS
CEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
QLDSEGIALDSIGIDSWGVDFVLLDKQGKRIGQPVYYRDSRTQGVMARAQQTLGSNAIYR
HHCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEE
RTGIQFLPFNTLYQLRALSEQQPHLLADVAHLLLIPDYLHYRLTGQLNWEYTNASTTQLL
CCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCEEEE
NIETGDWDSDLLAYAGVPAHWFAKPGKPGNTIGYWHSANGQQVPVVAVATHDTASAVLAA
EEECCCCCCHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCEEEEEEEECCCHHHHHHHH
PLIDADAAYLSSGTWSLMGFESGTPLTHQQAQCSNITNEGGAEGRYRVLKNIMGLWLLQR
HHHCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
ATDELQIDDLPQLIEQAARQPACRSLINPNDSRFINPPNMCREIQNACREHQFPVPNTAA
CCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH
QLARCIFDSLAMLYRQVAQELATLRGRPISHLHIVGGGCQNQFLNQLCADACGLNVSMGP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCC
VEASTLGNIGSQLISLGEVADVTHYRRIVANNFPLHHLSPHDNSDFAAHWLQFQSLSQLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KELCI
HHHCC
>Mature Secondary Structure
MVAIDLGASSGRVMLASYYPGQQQLTLREVCRFTNQIKSIDGSDVWDIDAIEQSIREGLS
CEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
QLDSEGIALDSIGIDSWGVDFVLLDKQGKRIGQPVYYRDSRTQGVMARAQQTLGSNAIYR
HHCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEE
RTGIQFLPFNTLYQLRALSEQQPHLLADVAHLLLIPDYLHYRLTGQLNWEYTNASTTQLL
CCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCEEEE
NIETGDWDSDLLAYAGVPAHWFAKPGKPGNTIGYWHSANGQQVPVVAVATHDTASAVLAA
EEECCCCCCHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCEEEEEEEECCCHHHHHHHH
PLIDADAAYLSSGTWSLMGFESGTPLTHQQAQCSNITNEGGAEGRYRVLKNIMGLWLLQR
HHHCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
ATDELQIDDLPQLIEQAARQPACRSLINPNDSRFINPPNMCREIQNACREHQFPVPNTAA
CCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH
QLARCIFDSLAMLYRQVAQELATLRGRPISHLHIVGGGCQNQFLNQLCADACGLNVSMGP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCC
VEASTLGNIGSQLISLGEVADVTHYRRIVANNFPLHHLSPHDNSDFAAHWLQFQSLSQLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KELCI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA