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The map label for this gene is trkD [H]

Identifier: 162419440

GI number: 162419440

Start: 5807

End: 7675

Strand: Direct

Name: trkD [H]

Synonym: YpAngola_A0006

Alternate gene names: 162419440

Gene position: 5807-7675 (Clockwise)

Preceding gene: 162419901

Following gene: 162420591

Centisome position: 0.13

GC content: 45.8

Gene sequence:

>1869_bases
ATGAGCACAGAGCATAAACAATATTTATCCGCGGTGACTTTGGCTGCAATCGGGGTCGTTTACGGTGATATTGGCACCAG
CCCACTCTATACCTTGAGAGAGTGTTTTTCTGGTCATTATGGTTTTGATGTCCGACCCGATGTGGTGTTTGGTTTTTTAT
CGCTGATTTTCTGGATGCTAATTCTAGTCGTCTCGGTTAAATATCTGACCTATGTGATGCGGGCTGATAACGCGGGTGAA
GGAGGGATTTTAACGTTGATGTCTTTGGCAGGGCGTAATACCTCTTCCAGAGCGACGTCTATCTTGGTGGTCCTTGGGCT
AATTGGTGGCAGCTTCTTTTATGGTGAAGTGGTCATTACCCCGGCAATCTCGGTGATGTCAGCTATTGAAGGGTTGGAAA
TCGCCGCACCCGCCCTTGATCCCTACATTGTTCCCTGCTCCATTGCCGTATTAACGCTACTTTTTGTGATTCAAAAGCAT
GGCACTGGCAGTGTTGGTAAACTTTTCGCCCCGGTGATGCTGGTGTGGTTCCTGACGTTAGCCTTACTTGGTCTGCGCAG
TATTATTGCTAACCCAGAAGTTTTGGCCGCGCTGAATCCCAAATGGGCAATAAGCTTTTTTGTTGAATATAAGTCTGTTT
CGTTTTTTGCCCTTGGTGCGGTAGTTCTGGCGATTACTGGCGTTGAGGCGTTGTATGCGGATATGGGGCATTTTGGTAAG
TTTCCTATCCGGCTCGCTTGGTTTACTGTGGTCTTACCGTCGTTGGTGCTGAATTATTTTGGTCAGGGGGCGTTATTACT
GAAAAACCCTGAAGCCATCAAAAACCCCTTCTTTCTGCTAGCCCCCGACTGGGCACTGATTCCATTACTTATTCTGGCGA
CGCTAGCCACTGTTATTGCCTCACAGGCGGTGATTTCTGGCGTATTTTCACTTACTCGACAGGCTGTTCGTTTAGGGTAT
TTACCACCCATGCGAATTATTCATACTTCAGAGATGGAATCTGGCCAGATATATATCCCAGTGATCAATTGGACCCTCTA
TTTAGCGGTGGTGTTAGTGATTATCGGTTTTGAACGCTCCAGTAATTTGGCGGCGGCTTATGGAATAGCGGTTACCGGGA
CTATGGTTATCACCAGTATTCTGTTTTGTACCGTGGCATGGAAAAACTGGCATTGGAATCGCTTTCTCGTCGTATTTTTA
CTGATGGTCTTGTTGATTATCGATATCCCGATGTTTTCTGCCAATGTGCTTAAATTATTCTCAGGGGGTTGGTTGCCACT
GTCTTTAGGTTTGGTGATGTTTATTATTATGACCACCTGGAAAAGTGAGCGTTTCAGTTTACTGCGCCGTATGCATGAAC
ACAGTAATTCACTGGAAGCGATGATTGCTTCACTAGAGAAGTCACCGCCAGTACGGGTACCCGGTACGGCGGTGTATATG
TCGCGAGCAATGAATGTCATTCCATTTGCATTATTACATAACCTTAAACATAACAAAGTGTTACATGAGCGTGTTGTGTT
GCTAACGATGCGGACTGACGATGTGCCTTATGTACATAATGTGGAGCGGGTTACCATCGAGCAACTTTCTCCAACCTTCT
GGCGGGTGGTTGCCAGATACGGTTGGCGTGAAACACCTAATGTGGCGGAAATTTTCCACCGTTGTGGTTTGGAAGGTTTG
TCTTGCCAGATGATGGAAACGTCGTTCTTTATGTCACATGAATCGCTAATCCTGACTAAGCGGCCATGGCACTTATTTTT
ACGTGGTAAGTTATTTATTGCACTTAGCCGTAATGCATTACGCGCACCAGATCAATTTGAGATCCCACCCAATAGGGTTA
TTGAACTTGGGACACAAGTGGAAATTTAA

Upstream 100 bases:

>100_bases
TAAATAATGCATACTGAACGCCTTTCGTGGGCGTGAAAGGACACAGGATCTTCTGTCATGGGGCCTAAACGCATACATCA
GCTTATGGATGTTCTAGCAA

Downstream 100 bases:

>100_bases
TTGAGAGGCCGTTAATCATAACGGCCTCTTCTATCATCATTCACACTATTATCATCATCCACACTATCACCGCTAAAATC
CTTCTTCTTATATCGCTAGT

Product: potassium transport protein Kup

Products: K (I) [Cytoplasm] [C]

Alternate protein names: Kup system potassium uptake protein [H]

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MSTEHKQYLSAVTLAAIGVVYGDIGTSPLYTLRECFSGHYGFDVRPDVVFGFLSLIFWMLILVVSVKYLTYVMRADNAGE
GGILTLMSLAGRNTSSRATSILVVLGLIGGSFFYGEVVITPAISVMSAIEGLEIAAPALDPYIVPCSIAVLTLLFVIQKH
GTGSVGKLFAPVMLVWFLTLALLGLRSIIANPEVLAALNPKWAISFFVEYKSVSFFALGAVVLAITGVEALYADMGHFGK
FPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGY
LPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFL
LMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYM
SRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTIEQLSPTFWRVVARYGWRETPNVAEIFHRCGLEGL
SCQMMETSFFMSHESLILTKRPWHLFLRGKLFIALSRNALRAPDQFEIPPNRVIELGTQVEI

Sequences:

>Translated_622_residues
MSTEHKQYLSAVTLAAIGVVYGDIGTSPLYTLRECFSGHYGFDVRPDVVFGFLSLIFWMLILVVSVKYLTYVMRADNAGE
GGILTLMSLAGRNTSSRATSILVVLGLIGGSFFYGEVVITPAISVMSAIEGLEIAAPALDPYIVPCSIAVLTLLFVIQKH
GTGSVGKLFAPVMLVWFLTLALLGLRSIIANPEVLAALNPKWAISFFVEYKSVSFFALGAVVLAITGVEALYADMGHFGK
FPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGY
LPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFL
LMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYM
SRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTIEQLSPTFWRVVARYGWRETPNVAEIFHRCGLEGL
SCQMMETSFFMSHESLILTKRPWHLFLRGKLFIALSRNALRAPDQFEIPPNRVIELGTQVEI
>Mature_621_residues
STEHKQYLSAVTLAAIGVVYGDIGTSPLYTLRECFSGHYGFDVRPDVVFGFLSLIFWMLILVVSVKYLTYVMRADNAGEG
GILTLMSLAGRNTSSRATSILVVLGLIGGSFFYGEVVITPAISVMSAIEGLEIAAPALDPYIVPCSIAVLTLLFVIQKHG
TGSVGKLFAPVMLVWFLTLALLGLRSIIANPEVLAALNPKWAISFFVEYKSVSFFALGAVVLAITGVEALYADMGHFGKF
PIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYL
PPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFLL
MVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYMS
RAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTIEQLSPTFWRVVARYGWRETPNVAEIFHRCGLEGLS
CQMMETSFFMSHESLILTKRPWHLFLRGKLFIALSRNALRAPDQFEIPPNRVIELGTQVEI

Specific function: Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system) [H]

COG id: COG3158

COG function: function code P; K+ transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family [H]

Homologues:

Organism=Escherichia coli, GI48994960, Length=622, Percent_Identity=84.2443729903537, Blast_Score=1078, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003855
- InterPro:   IPR023051 [H]

Pfam domain/function: PF02705 K_trans [H]

EC number: NA

Molecular weight: Translated: 69117; Mature: 68986

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEHKQYLSAVTLAAIGVVYGDIGTSPLYTLRECFSGHYGFDVRPDVVFGFLSLIFWML
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
ILVVSVKYLTYVMRADNAGEGGILTLMSLAGRNTSSRATSILVVLGLIGGSFFYGEVVIT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCHHHHH
PAISVMSAIEGLEIAAPALDPYIVPCSIAVLTLLFVIQKHGTGSVGKLFAPVMLVWFLTL
HHHHHHHHHCCCCEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ALLGLRSIIANPEVLAALNPKWAISFFVEYKSVSFFALGAVVLAITGVEALYADMGHFGK
HHHHHHHHHCCCCEEEECCCCEEEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIA
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCEEEECCCHHHHHHHHHHHHHHHHH
SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERS
HHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
SNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFLLMVLLIIDIPMFSANVLKLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYM
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHH
SRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTIEQLSPTFWRVVARY
HHHHHHHHHHHHHHCHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHH
GWRETPNVAEIFHRCGLEGLSCQMMETSFFMSHESLILTKRPWHLFLRGKLFIALSRNAL
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECEEEEEEECCCC
RAPDQFEIPPNRVIELGTQVEI
CCCCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
STEHKQYLSAVTLAAIGVVYGDIGTSPLYTLRECFSGHYGFDVRPDVVFGFLSLIFWML
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
ILVVSVKYLTYVMRADNAGEGGILTLMSLAGRNTSSRATSILVVLGLIGGSFFYGEVVIT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCHHHHH
PAISVMSAIEGLEIAAPALDPYIVPCSIAVLTLLFVIQKHGTGSVGKLFAPVMLVWFLTL
HHHHHHHHHCCCCEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ALLGLRSIIANPEVLAALNPKWAISFFVEYKSVSFFALGAVVLAITGVEALYADMGHFGK
HHHHHHHHHCCCCEEEECCCCEEEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIA
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCEEEECCCHHHHHHHHHHHHHHHHH
SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERS
HHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
SNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFLLMVLLIIDIPMFSANVLKLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYM
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHH
SRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTIEQLSPTFWRVVARY
HHHHHHHHHHHHHHCHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHH
GWRETPNVAEIFHRCGLEGLSCQMMETSFFMSHESLILTKRPWHLFLRGKLFIALSRNAL
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECEEEEEEECCCC
RAPDQFEIPPNRVIELGTQVEI
CCCCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA