Click here to switch to the map view.

The map label for this gene is fliC [H]

Identifier: 162418942

GI number: 162418942

Start: 2114236

End: 2114913

Strand: Direct

Name: fliC [H]

Synonym: YpAngola_A2026

Alternate gene names: 162418942

Gene position: 2114236-2114913 (Clockwise)

Preceding gene: 162418290

Following gene: 162418642

Centisome position: 46.94

GC content: 46.02

Gene sequence:

>678_bases
GTGTGGATCACTATTGCACCGTTCGTTACAATTGATATCAACCTGCAAAAAATCGACTCTAAGAGCCTGGGCTTAGGTAG
CTACTCTGTTAGCGGTGTATCTGGTGCATTAACCTCATTAACTGATACATCAGTAACAGGTGTAACTACCACGACCGCGC
TTGATTTTAGCGACATTAGCACTTTTGCTAAAGGTGCCACAGTACATGGTATTGGGGACGTTGGCACAGATGGCGCTTAT
GCAGACGGTTATGTTATCCGTACTACTGACGGTAAACAATATAAAGGTGAAGTGGATGCTACTAATGGAAAAGTAACATT
TGCAGATGATGCTAATGGCGATCCAATTGATGACGCTACCAAGCTGGAAGCAGCGGCTCAGTTTAGTCCTGCTGGCAAAG
CAACGGCTTCACCATTGGAGACTTTGGATGATGCTATCAAACAAGTTGATGGCCTTCGTAGTTCACTGGGTGCGGTACAA
AACCGTTTCGAATCTGCGGTAACCAACCTGAATAACACCGTGACTAACCTGACTTCTGCCCGTAGCCGTATCGAAGATGC
TGATTATGCGACTGAAGTGTCTAACATGAGCCGTGCTCAGATCCTGCAACAAGCAGGGACTTCTGTGTTGTCTCAAGCTA
ACCAGGTTCCACAGACTGTTCTGTCTCTGCTGAATTAA

Upstream 100 bases:

>100_bases
TTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAACTCTCCTGAATCAGGAGAGCAGATTACCCCCTG
GATCTGATTTCAGGCGTTGG

Downstream 100 bases:

>100_bases
TTCGACGGCACTCATACCCTTATTCCAACCCTGCTGCGGCGGGGTTTTTACCTCAGTTTGTTTGAGATTGTCGTGGTATT
AGCGGCTTTCACACCGATGG

Product: phase-1 flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MWITIAPFVTIDINLQKIDSKSLGLGSYSVSGVSGALTSLTDTSVTGVTTTTALDFSDISTFAKGATVHGIGDVGTDGAY
ADGYVIRTTDGKQYKGEVDATNGKVTFADDANGDPIDDATKLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQ
NRFESAVTNLNNTVTNLTSARSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLLN

Sequences:

>Translated_225_residues
MWITIAPFVTIDINLQKIDSKSLGLGSYSVSGVSGALTSLTDTSVTGVTTTTALDFSDISTFAKGATVHGIGDVGTDGAY
ADGYVIRTTDGKQYKGEVDATNGKVTFADDANGDPIDDATKLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQ
NRFESAVTNLNNTVTNLTSARSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLLN
>Mature_225_residues
MWITIAPFVTIDINLQKIDSKSLGLGSYSVSGVSGALTSLTDTSVTGVTTTTALDFSDISTFAKGATVHGIGDVGTDGAY
ADGYVIRTTDGKQYKGEVDATNGKVTFADDANGDPIDDATKLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQ
NRFESAVTNLNNTVTNLTSARSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLLN

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=206, Percent_Identity=46.1165048543689, Blast_Score=123, Evalue=1e-29,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 23377; Mature: 23377

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWITIAPFVTIDINLQKIDSKSLGLGSYSVSGVSGALTSLTDTSVTGVTTTTALDFSDIS
CEEEEECEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECHHHHH
TFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKGEVDATNGKVTFADDANGDPIDDAT
HHHCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCCCCCCCCCCHH
KLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQNRFESAVTNLNNTVTNLTSA
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MWITIAPFVTIDINLQKIDSKSLGLGSYSVSGVSGALTSLTDTSVTGVTTTTALDFSDIS
CEEEEECEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECHHHHH
TFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKGEVDATNGKVTFADDANGDPIDDAT
HHHCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCCCCCCCCCCHH
KLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQNRFESAVTNLNNTVTNLTSA
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2673930 [H]