Definition Yersinia pestis Angola, complete genome.
Accession NC_010159
Length 4,504,254

Click here to switch to the map view.

The map label for this gene is ybjC [C]

Identifier: 162418319

GI number: 162418319

Start: 1611545

End: 1611841

Strand: Direct

Name: ybjC [C]

Synonym: YpAngola_A1561

Alternate gene names: 162418319

Gene position: 1611545-1611841 (Clockwise)

Preceding gene: 162421129

Following gene: 162421491

Centisome position: 35.78

GC content: 48.15

Gene sequence:

>297_bases
ATGCCCCGGATTGTGATCATTTCAGAAGTACTGGGGTTGTTGTTATTGGTTGTTGCTTATTTAAGCATCAATAATTATTT
GTCATTGCCAGGGGAAATGGGGACACCAACGGCTGCCATTATGATGATTTTTGTGGGGGTCGGCCTGATGATCCCGGCGG
CAGTGTGTATCGTCTGGCGGGTAGCCAGCGGTTTTGGTCCATTATTGGGCAGTGCTGACAGAATATCGACGCCACAGAAG
GCGTCAGAGGAAAAACTGGCGGCGAAAAGTAAAAAATCGGGTCAGGATAACCACTAA

Upstream 100 bases:

>100_bases
GGATTTGTCTCTCGCTTGCCGCCTTCCGCAACTCGAATTATGTTGGGTATAAACGCTCATACAGAGCCTGTCGGAGGAAA
AGATGCGCTCGTTAGGAAAT

Downstream 100 bases:

>100_bases
GATTTTATAAGCACATTGAGAATATCTAAGCCGAGGAACGGCCCAGATATCAAATTAGTCGGGATTGATCGTAGCGCTAT
CGGCCAATATTCCGTAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAAVCIVWRVASGFGPLLGSADRISTPQK
ASEEKLAAKSKKSGQDNH

Sequences:

>Translated_98_residues
MPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAAVCIVWRVASGFGPLLGSADRISTPQK
ASEEKLAAKSKKSGQDNH
>Mature_97_residues
PRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAAVCIVWRVASGFGPLLGSADRISTPQKA
SEEKLAAKSKKSGQDNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10339; Mature: 10207

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAAVCIVWR
CCCEEHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VASGFGPLLGSADRISTPQKASEEKLAAKSKKSGQDNH
HHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAAVCIVWR
CCEEHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VASGFGPLLGSADRISTPQKASEEKLAAKSKKSGQDNH
HHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA