| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yjgQ [C]
Identifier: 162149096
GI number: 162149096
Start: 3417300
End: 3418409
Strand: Direct
Name: yjgQ [C]
Synonym: GDI_3326
Alternate gene names: 162149096
Gene position: 3417300-3418409 (Clockwise)
Preceding gene: 162149095
Following gene: 162149097
Centisome position: 86.64
GC content: 68.38
Gene sequence:
>1110_bases ATGACGGTTTCCGTCACCCTGTCCTTCTATATCGCCCGGCAGTTCACGCTGGCGGTCATGGCGATGATCCTGTCGCTGAC GGGGCTGGTCTCGCTGTTCGATTTCATCGACCTGCTGCGCCGCGTGGCCACCCGGCCCGACGTGCCGACCAGCCTGGCCA GCGAGATCGCGCTGCTGCACGTCCCCTATTTCATGATCGAGATCCTGCCCTTCGGCGTGCTGCTGGGCGGGATCGTGTGC TTCTGGCGGCTGACCCGGTCGTCCGAGCTGATCGTGGCGCGCGCGGCCGGGATTTCGGCCTGGCAGTTCCTGACCGGCCC GCTGTCCTGCGCGCTGCTGATCGGCATCCTGGCCACCGGGGCCCTGTCGCCGCTGTCGTCCATCATGTATCGCCAGGCGG AAACGCTGGACCACGTCTATCTGCGCAGCGGCGGCCCGCTGAACCTGTCGGACGGCGCGCTGTGGCTGCGCCAGGCCGAT TCCGGCCTGGTTCCCCACGGGGTCGCGATCCTGCATGCCCGCAGCGTCCACCTGCAGGGCGGGGTCCTGCGGATCGGCGG CATCAGCCTGTTCCGGCTGGACGATACCGACCATCTGATCGTCCGGATCGAAGCCCCCGAGGGCTATCTCGGCCGGAAGG TCTGGATTTTCCAGGATGCCAGGACGATCCGCCCCGACCGCCTGCCCGTCCCGGCGGGCCGGTTCGTCATGCCGACCGAC CTGACCGTTCCCCGCGTGCAGGAAAGCTTCGCCTCGCCCGACACGCTGTCGGTCTGGGCGCTGCCCGGCTTCATCGCCCT GCTGGAACGTTCGGGCTTTTCGTCCATCCGCCACCGGCTGCATTTCCAGACCCTGCTGACATTGCCCATCCTGGCCGGCA CCATGGCGCTGGTGGCGGCGGGCTTTTCGATGCGGCCGACGCGGCGCGGCGGCGTCGCGCGCATGATCGGCAGCGGCGTC GCCGCGGGGTTCGCCCTGTTCACGATCTCGAAGGTGGCCGCGCAATTCGGCGAATCCGGGGCGATGCCGCCGCTGCTGGC CGCCTGGGCCCCGACCGGAGCAGGACTCTGCCTTGCAGTTTCTCTGCTGCTTCATCTAGAAGACGGATGA
Upstream 100 bases:
>100_bases TCGCCTGCGCGCTGATGCTGTTCCTGCCGGAACTGAAATGGCGCGATGCCGGCGCCCAGCCCGGCCTCGACGCGCCGGCC ATGACGGAAACGGGCCGGTC
Downstream 100 bases:
>100_bases TGCCGATCCTGATGTCCCGTCGCCTGTTTCGCCCTGCCCGGGGCCAGCGTTCGCAGGCGCGTGGCACATTGCTGGCTGCC GGCCTGCTGGGCAGCACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Permease YjgP/YjgQ; Permease; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Permease; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease; Permease YjgP; Transmembrane Protein; Permeases; Transporter YjgP/YjgQ; Permease Protein
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTVSVTLSFYIARQFTLAVMAMILSLTGLVSLFDFIDLLRRVATRPDVPTSLASEIALLHVPYFMIEILPFGVLLGGIVC FWRLTRSSELIVARAAGISAWQFLTGPLSCALLIGILATGALSPLSSIMYRQAETLDHVYLRSGGPLNLSDGALWLRQAD SGLVPHGVAILHARSVHLQGGVLRIGGISLFRLDDTDHLIVRIEAPEGYLGRKVWIFQDARTIRPDRLPVPAGRFVMPTD LTVPRVQESFASPDTLSVWALPGFIALLERSGFSSIRHRLHFQTLLTLPILAGTMALVAAGFSMRPTRRGGVARMIGSGV AAGFALFTISKVAAQFGESGAMPPLLAAWAPTGAGLCLAVSLLLHLEDG
Sequences:
>Translated_369_residues MTVSVTLSFYIARQFTLAVMAMILSLTGLVSLFDFIDLLRRVATRPDVPTSLASEIALLHVPYFMIEILPFGVLLGGIVC FWRLTRSSELIVARAAGISAWQFLTGPLSCALLIGILATGALSPLSSIMYRQAETLDHVYLRSGGPLNLSDGALWLRQAD SGLVPHGVAILHARSVHLQGGVLRIGGISLFRLDDTDHLIVRIEAPEGYLGRKVWIFQDARTIRPDRLPVPAGRFVMPTD LTVPRVQESFASPDTLSVWALPGFIALLERSGFSSIRHRLHFQTLLTLPILAGTMALVAAGFSMRPTRRGGVARMIGSGV AAGFALFTISKVAAQFGESGAMPPLLAAWAPTGAGLCLAVSLLLHLEDG >Mature_368_residues TVSVTLSFYIARQFTLAVMAMILSLTGLVSLFDFIDLLRRVATRPDVPTSLASEIALLHVPYFMIEILPFGVLLGGIVCF WRLTRSSELIVARAAGISAWQFLTGPLSCALLIGILATGALSPLSSIMYRQAETLDHVYLRSGGPLNLSDGALWLRQADS GLVPHGVAILHARSVHLQGGVLRIGGISLFRLDDTDHLIVRIEAPEGYLGRKVWIFQDARTIRPDRLPVPAGRFVMPTDL TVPRVQESFASPDTLSVWALPGFIALLERSGFSSIRHRLHFQTLLTLPILAGTMALVAAGFSMRPTRRGGVARMIGSGVA AGFALFTISKVAAQFGESGAMPPLLAAWAPTGAGLCLAVSLLLHLEDG
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39673; Mature: 39542
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSVTLSFYIARQFTLAVMAMILSLTGLVSLFDFIDLLRRVATRPDVPTSLASEIALLH CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VPYFMIEILPFGVLLGGIVCFWRLTRSSELIVARAAGISAWQFLTGPLSCALLIGILATG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH ALSPLSSIMYRQAETLDHVYLRSGGPLNLSDGALWLRQADSGLVPHGVAILHARSVHLQG HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEECC GVLRIGGISLFRLDDTDHLIVRIEAPEGYLGRKVWIFQDARTIRPDRLPVPAGRFVMPTD CEEEECCEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCC LTVPRVQESFASPDTLSVWALPGFIALLERSGFSSIRHRLHFQTLLTLPILAGTMALVAA CCCHHHHHHCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFSMRPTRRGGVARMIGSGVAAGFALFTISKVAAQFGESGAMPPLLAAWAPTGAGLCLAV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHH SLLLHLEDG HHHHHCCCC >Mature Secondary Structure TVSVTLSFYIARQFTLAVMAMILSLTGLVSLFDFIDLLRRVATRPDVPTSLASEIALLH EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VPYFMIEILPFGVLLGGIVCFWRLTRSSELIVARAAGISAWQFLTGPLSCALLIGILATG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH ALSPLSSIMYRQAETLDHVYLRSGGPLNLSDGALWLRQADSGLVPHGVAILHARSVHLQG HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEECC GVLRIGGISLFRLDDTDHLIVRIEAPEGYLGRKVWIFQDARTIRPDRLPVPAGRFVMPTD CEEEECCEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCC LTVPRVQESFASPDTLSVWALPGFIALLERSGFSSIRHRLHFQTLLTLPILAGTMALVAA CCCHHHHHHCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFSMRPTRRGGVARMIGSGVAAGFALFTISKVAAQFGESGAMPPLLAAWAPTGAGLCLAV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHH SLLLHLEDG HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA