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The map label for this gene is rfaF [C]

Identifier: 162149035

GI number: 162149035

Start: 3356380

End: 3357366

Strand: Reverse

Name: rfaF [C]

Synonym: GDI_3265

Alternate gene names: 162149035

Gene position: 3357366-3356380 (Counterclockwise)

Preceding gene: 162149040

Following gene: 162149034

Centisome position: 85.12

GC content: 75.48

Gene sequence:

>987_bases
GTGTCGCGGGGTATGCGGATTCTGTTCATCACCTCCACCCGGCTGGGGGACGCGGTCCTGTCCACCGGGTTGCTGGATGT
CCTGCTGGCGCGTCATCCGGGCGCGCGCGTCACCATTGCCTGTGGGCCGGTGGCGGCCTCGCTGTTCGATGCCATGCCCG
GGCGCGAGCGGACGATCGTCGTGACCAAGCGGCGCCATGACCTGCACTGGCTGTCGCTGTGGCGCGACTGCGTCGGGACC
CGATGGGATCTGTGCGTGGATTTGCGCGGTTCGGCGATCACACTGTTCCTGTCCGCCCGGCGGCGGCTGATCATGCGGGG
CGGGCGGCGGCAGGGCGCGCGGGTGGCCCATCTGGGCGCGCTGCTGGGCCTGTCGCCGCCGCCCCTGCCGGTGGTGTGGA
CCGCGCCGGCGGACCGCGAGCGGGCGCGGGCGATCCTGCCCGACGGCACGCGCTGGCTGGCCCTGGCGCCGACCGCCAAC
TGGGTGGGGAAGATCTGGCCGGCGGACCGCTTCGTCGCGCTGGCCCAGGCCTTGCAGGCCCATGCGGTGCAGGCCGGGCA
TGGCCCGCTGCGCCCGGTCGTCCTGTACGGCCCCGGCGAGGCCGAGCGCCGGATGGCGGCCCCGGTGCTGGCCGCCCTGC
CGGATGCCGTCGATGCCGGGGGGGATCATGCGCTGCCCCAGGTGGCGGCGCTGCTGGCGCGCTGCCAGGGGTTCGTCGGC
AACGATTCGGGCCTGATGCATCTGTCGGCGGCGGCCGGCACGCCGACGCTGGGGCTGTTCGGGCCCAGCCGGATGACCGA
ATACGGGCCCGCCGGCCGCTGTGCCCGGGGCGTCGCGGCGCCGGGGCCGGAGGGCCACGCGCCCATCGCGGGGCTGGAGG
TCGCAACGGTGCTGCGGGCCGCGATCGACCTGCTGGACGCGGCTGGGCCAGCGGCGGGCGATATCCCGGGCGACGCCCCG
GGCGACGCAATGTCCGTGGTCGCGTGA

Upstream 100 bases:

>100_bases
CGGCGACAAGGGGAAAGCCACGGGAGAATCCCTCCGGGGACCATATATCGGGCATGCGCCGGCCCCATGGACCGATTTCA
CCCGCCCGGGCAATGGGCTA

Downstream 100 bases:

>100_bases
AGACCGTCCTCGTCTATCGCGATCGGCTGCTGCCGCCCTCGGAACAGGCCTTCATGCGGCGGCAATATATGGGGTTTCGC
ACTCTCCGGCCCTGCTGGGT

Product: glycosyl transferase

Products: NA

Alternate protein names: ADP-Heptose-LPS Heptosyltransferase; Lipopolysaccharide Heptosyltransferase; ADP-Heptose-LPS-Heptosyl Transferase II; ADP-Heptose-LPS Heptosyltransferase II; Heptosyltransferase Superfamily; Family 9 Glycosyl Transferase; Glycosyl Transferase

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSRGMRILFITSTRLGDAVLSTGLLDVLLARHPGARVTIACGPVAASLFDAMPGRERTIVVTKRRHDLHWLSLWRDCVGT
RWDLCVDLRGSAITLFLSARRRLIMRGGRRQGARVAHLGALLGLSPPPLPVVWTAPADRERARAILPDGTRWLALAPTAN
WVGKIWPADRFVALAQALQAHAVQAGHGPLRPVVLYGPGEAERRMAAPVLAALPDAVDAGGDHALPQVAALLARCQGFVG
NDSGLMHLSAAAGTPTLGLFGPSRMTEYGPAGRCARGVAAPGPEGHAPIAGLEVATVLRAAIDLLDAAGPAAGDIPGDAP
GDAMSVVA

Sequences:

>Translated_328_residues
MSRGMRILFITSTRLGDAVLSTGLLDVLLARHPGARVTIACGPVAASLFDAMPGRERTIVVTKRRHDLHWLSLWRDCVGT
RWDLCVDLRGSAITLFLSARRRLIMRGGRRQGARVAHLGALLGLSPPPLPVVWTAPADRERARAILPDGTRWLALAPTAN
WVGKIWPADRFVALAQALQAHAVQAGHGPLRPVVLYGPGEAERRMAAPVLAALPDAVDAGGDHALPQVAALLARCQGFVG
NDSGLMHLSAAAGTPTLGLFGPSRMTEYGPAGRCARGVAAPGPEGHAPIAGLEVATVLRAAIDLLDAAGPAAGDIPGDAP
GDAMSVVA
>Mature_327_residues
SRGMRILFITSTRLGDAVLSTGLLDVLLARHPGARVTIACGPVAASLFDAMPGRERTIVVTKRRHDLHWLSLWRDCVGTR
WDLCVDLRGSAITLFLSARRRLIMRGGRRQGARVAHLGALLGLSPPPLPVVWTAPADRERARAILPDGTRWLALAPTANW
VGKIWPADRFVALAQALQAHAVQAGHGPLRPVVLYGPGEAERRMAAPVLAALPDAVDAGGDHALPQVAALLARCQGFVGN
DSGLMHLSAAAGTPTLGLFGPSRMTEYGPAGRCARGVAAPGPEGHAPIAGLEVATVLRAAIDLLDAAGPAAGDIPGDAPG
DAMSVVA

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34213; Mature: 34082

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRGMRILFITSTRLGDAVLSTGLLDVLLARHPGARVTIACGPVAASLFDAMPGRERTIV
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCCEEEE
VTKRRHDLHWLSLWRDCVGTRWDLCVDLRGSAITLFLSARRRLIMRGGRRQGARVAHLGA
EECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHH
LLGLSPPPLPVVWTAPADRERARAILPDGTRWLALAPTANWVGKIWPADRFVALAQALQA
HHCCCCCCCCEEECCCCCHHHCCEECCCCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHH
HAVQAGHGPLRPVVLYGPGEAERRMAAPVLAALPDAVDAGGDHALPQVAALLARCQGFVG
HHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCC
NDSGLMHLSAAAGTPTLGLFGPSRMTEYGPAGRCARGVAAPGPEGHAPIAGLEVATVLRA
CCCCEEEEEECCCCCEEECCCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHH
AIDLLDAAGPAAGDIPGDAPGDAMSVVA
HHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRGMRILFITSTRLGDAVLSTGLLDVLLARHPGARVTIACGPVAASLFDAMPGRERTIV
CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCCEEEE
VTKRRHDLHWLSLWRDCVGTRWDLCVDLRGSAITLFLSARRRLIMRGGRRQGARVAHLGA
EECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHH
LLGLSPPPLPVVWTAPADRERARAILPDGTRWLALAPTANWVGKIWPADRFVALAQALQA
HHCCCCCCCCEEECCCCCHHHCCEECCCCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHH
HAVQAGHGPLRPVVLYGPGEAERRMAAPVLAALPDAVDAGGDHALPQVAALLARCQGFVG
HHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCC
NDSGLMHLSAAAGTPTLGLFGPSRMTEYGPAGRCARGVAAPGPEGHAPIAGLEVATVLRA
CCCCEEEEEECCCCCEEECCCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHH
AIDLLDAAGPAAGDIPGDAPGDAMSVVA
HHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA