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The map label for this gene is arnC [H]

Identifier: 162148923

GI number: 162148923

Start: 3243211

End: 3244344

Strand: Reverse

Name: arnC [H]

Synonym: GDI_3153

Alternate gene names: 162148923

Gene position: 3244344-3243211 (Counterclockwise)

Preceding gene: 162148924

Following gene: 162148922

Centisome position: 82.26

GC content: 69.58

Gene sequence:

>1134_bases
GTGAGCATCGTCCTGCCCCCCGTCGATGCACCGCCGGCCACCAAGGCGCGGCCCGACACGGTCCGGCTGGCGGCCGATAT
CAGCATCGTGGTCCCCTGCTACAACGAGCGCGCGAACGTGCGCCCCATGGTCGCCGCCCTGTCCGCCGCCCTGGCGGGGC
GGGAGTGGGAGGTCATCTTCGTCGATGACAACTCGCCCGACGGCACGATCGACGAGGTCCGGTCGCTTGCGGAATGCGAT
GGCCGGGTGCGGGGCATCCTGCGCGTGGGTCGCCGTGGCCTGTCCTCGGCGGTGATCGAGGGCGTCCTGTCGTCCTCGGC
GCGCGTGGTCGCCGTCATGGACGGCGACATGCAGCATGATGAGAGCTGCCTGGGCCGGCTGATCGACGCGGTGGTGCGCG
ACGGCTACGACATCGCCGTCGGCAGCCGCCATGTCGAAGGCGGCGACAATGCCGGCCTGGCCAATGGCTGGCGGAAATTC
CTGTCGGATTCCGGCATCCGCATGGTGCAGATGATCCTGCCGGTGCGGCTGGGGGACCCGATGAGCGGGTTTTTCGCCAT
GCGGCGCGACCTGTTCGAACGCGCGGTGCCGCATCTGTCGGGGACGGGGTTCAAGATCCTGCTGGACGTGTTCCTGTCCG
CCCCCCAGCGCCCGCGGGTGCTGGAGGTCCCGTTCGTCTTCCGCCCCCGCGCGGCGGGCGAGAGCAAGCTGGACGTCCTG
GTCCTGATCCAGTTCCTGGCGATGCTGGGCGACAAGGTATGCCGCGGGTTCCTGCCGACCCGCTTCATCGCGTTTGCCCT
GGTCGGCCTGGTGGGCATCCTGGTCAACCTGGTGGTGCTGGACGTTGCCCGCCGGTGCGGCGCCGATTTCGCGTCCGGGC
AGGGGATCGGGACCGTGGCCGCCATGGTGGCCAATTTCTGGATGAACAATTCCCTGACCTACCGCGACTGCCGCCTGCGC
GGCGGCCGGATGTGGCTGGGGCTGCTGCTGTTCCTGGCGATCTGCTCGGTGGGCGCACTCGCCGATATCGGCATCGCGCG
CGCGGTCTTCAGCGAGGACGGCAAATGGAACCAGGCGGGGGCCGCGGGGGCCGCGATCGCCGTGGTGTGGAATACGCCGT
GTCGTCGACGCTGA

Upstream 100 bases:

>100_bases
GGGTCCAGACATTGCAGACCATCCGCACGGCGCTGAGCCGCGCCGGCGTGCCCGTGCAGCCCCCCGGCGCCGGCGGCATG
GGCGTGGCAGGGACGGACAT

Downstream 100 bases:

>100_bases
TCTGGCGGGTGCGTTGACCGGCAGGGCCGGGTACGCCGATCGCAGTCTGCTGGTATGGGGCGGCGTTGCGCTGGGCCTGC
TGACGGTGCTGCGCGGTATC

Product: dolichol-phosphate mannosyltransferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSIVLPPVDAPPATKARPDTVRLAADISIVVPCYNERANVRPMVAALSAALAGREWEVIFVDDNSPDGTIDEVRSLAECD
GRVRGILRVGRRGLSSAVIEGVLSSSARVVAVMDGDMQHDESCLGRLIDAVVRDGYDIAVGSRHVEGGDNAGLANGWRKF
LSDSGIRMVQMILPVRLGDPMSGFFAMRRDLFERAVPHLSGTGFKILLDVFLSAPQRPRVLEVPFVFRPRAAGESKLDVL
VLIQFLAMLGDKVCRGFLPTRFIAFALVGLVGILVNLVVLDVARRCGADFASGQGIGTVAAMVANFWMNNSLTYRDCRLR
GGRMWLGLLLFLAICSVGALADIGIARAVFSEDGKWNQAGAAGAAIAVVWNTPCRRR

Sequences:

>Translated_377_residues
MSIVLPPVDAPPATKARPDTVRLAADISIVVPCYNERANVRPMVAALSAALAGREWEVIFVDDNSPDGTIDEVRSLAECD
GRVRGILRVGRRGLSSAVIEGVLSSSARVVAVMDGDMQHDESCLGRLIDAVVRDGYDIAVGSRHVEGGDNAGLANGWRKF
LSDSGIRMVQMILPVRLGDPMSGFFAMRRDLFERAVPHLSGTGFKILLDVFLSAPQRPRVLEVPFVFRPRAAGESKLDVL
VLIQFLAMLGDKVCRGFLPTRFIAFALVGLVGILVNLVVLDVARRCGADFASGQGIGTVAAMVANFWMNNSLTYRDCRLR
GGRMWLGLLLFLAICSVGALADIGIARAVFSEDGKWNQAGAAGAAIAVVWNTPCRRR
>Mature_376_residues
SIVLPPVDAPPATKARPDTVRLAADISIVVPCYNERANVRPMVAALSAALAGREWEVIFVDDNSPDGTIDEVRSLAECDG
RVRGILRVGRRGLSSAVIEGVLSSSARVVAVMDGDMQHDESCLGRLIDAVVRDGYDIAVGSRHVEGGDNAGLANGWRKFL
SDSGIRMVQMILPVRLGDPMSGFFAMRRDLFERAVPHLSGTGFKILLDVFLSAPQRPRVLEVPFVFRPRAAGESKLDVLV
LIQFLAMLGDKVCRGFLPTRFIAFALVGLVGILVNLVVLDVARRCGADFASGQGIGTVAAMVANFWMNNSLTYRDCRLRG
GRMWLGLLLFLAICSVGALADIGIARAVFSEDGKWNQAGAAGAAIAVVWNTPCRRR

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=231, Percent_Identity=29.8701298701299, Blast_Score=97, Evalue=3e-20,
Organism=Escherichia coli, GI1788588, Length=263, Percent_Identity=25.0950570342205, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71999402, Length=216, Percent_Identity=29.1666666666667, Blast_Score=90, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6325441, Length=254, Percent_Identity=35.0393700787402, Blast_Score=145, Evalue=9e-36,
Organism=Drosophila melanogaster, GI24585265, Length=227, Percent_Identity=29.9559471365639, Blast_Score=101, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 40605; Mature: 40474

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVLPPVDAPPATKARPDTVRLAADISIVVPCYNERANVRPMVAALSAALAGREWEVIF
CCEEECCCCCCCCCCCCCCEEEEEECEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEE
VDDNSPDGTIDEVRSLAECDGRVRGILRVGRRGLSSAVIEGVLSSSARVVAVMDGDMQHD
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
ESCLGRLIDAVVRDGYDIAVGSRHVEGGDNAGLANGWRKFLSDSGIRMVQMILPVRLGDP
HHHHHHHHHHHHHCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC
MSGFFAMRRDLFERAVPHLSGTGFKILLDVFLSAPQRPRVLEVPFVFRPRAAGESKLDVL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEECCCEECCCCCCCCHHHHH
VLIQFLAMLGDKVCRGFLPTRFIAFALVGLVGILVNLVVLDVARRCGADFASGQGIGTVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
AMVANFWMNNSLTYRDCRLRGGRMWLGLLLFLAICSVGALADIGIARAVFSEDGKWNQAG
HHHHHHHHCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AAGAAIAVVWNTPCRRR
CCCEEEEEEECCCCCCC
>Mature Secondary Structure 
SIVLPPVDAPPATKARPDTVRLAADISIVVPCYNERANVRPMVAALSAALAGREWEVIF
CEEECCCCCCCCCCCCCCEEEEEECEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEE
VDDNSPDGTIDEVRSLAECDGRVRGILRVGRRGLSSAVIEGVLSSSARVVAVMDGDMQHD
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
ESCLGRLIDAVVRDGYDIAVGSRHVEGGDNAGLANGWRKFLSDSGIRMVQMILPVRLGDP
HHHHHHHHHHHHHCCCEEEECCEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC
MSGFFAMRRDLFERAVPHLSGTGFKILLDVFLSAPQRPRVLEVPFVFRPRAAGESKLDVL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEECCCEECCCCCCCCHHHHH
VLIQFLAMLGDKVCRGFLPTRFIAFALVGLVGILVNLVVLDVARRCGADFASGQGIGTVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
AMVANFWMNNSLTYRDCRLRGGRMWLGLLLFLAICSVGALADIGIARAVFSEDGKWNQAG
HHHHHHHHCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AAGAAIAVVWNTPCRRR
CCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA