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The map label for this gene is ompR [H]

Identifier: 162148851

GI number: 162148851

Start: 3177867

End: 3178655

Strand: Reverse

Name: ompR [H]

Synonym: GDI_3080

Alternate gene names: 162148851

Gene position: 3178655-3177867 (Counterclockwise)

Preceding gene: 162148852

Following gene: 162148850

Centisome position: 80.59

GC content: 71.61

Gene sequence:

>789_bases
ATGCTGCGACCGAGCGTACACGCCGAGGCAGGACATGAGCCGGGACAGGATGTGATGGGTACGGACGGACGGGACAACGC
GGTGCGGGACGGGTCGATCGCCGGGGCGCATATTCTGGTGGTGGATGACGATCCGCGCCTGCGCCGCCTGCTGCAACGCT
ACCTGACCGAGCAGGGGTTTCGCATCAGCGCCGCCGCGTCGGCGGCCGAGGCCCGGCAGGTGCTGGGCTTCATGCAGCCC
GACGCGATGGTGCTGGACGTGACCATGCCCGGCGAGAACGGACTGCTGCTGACCCGCGCCCTGCGGCAGGAGGGGCAGGA
CCTGCCGATCCTGCTGCTGACCGCGCGCGGCGAGCCCGAGGACCGCATTACCGGGCTGGAGGCCGGGGCCGACGATTACC
TGGGCAAGCCCTTCGAGCCGCGCGAACTGCTGCTGCGGCTGAAGGCGCATCTGCGGCGGTTCGCGCCGCCGCCGCCGTCG
GACAATCTGCGCGTGGTCCGGCTGGGCGGGCTGGAATTCGACCCGGCACGGGGCCTGCTGTCGGGTCCCGAGGGCAGCGT
CCACCTGACGGGGGGCGAGATCGCGCTGCTGACCGTGCTGGCGCGCCGCCCCAACGAGACCCTGTCGCGCGACGAGATCG
CCCGGGTGCTGGACATGGAGGAAATCGGCGAGCGCGCGGTGGACGTGCAGGTGACGCGCCTGCGCCGCCGGATCGAGCCC
GACCCGCGTGAACCCCGATTCCTCCAGACCGTGCGCGGCAAGGGCTATGTGCTGAAGCCCGGGCTGTGA

Upstream 100 bases:

>100_bases
GGCGTCTACCGCGATGCGGGGGCGGCGGCGATCGAGGGGTTTCGCCGCGTCATGCAGGGCCTTATGGACGACAGGACGCG
CCGCGTGCTGGACAGCGTCA

Downstream 100 bases:

>100_bases
CGGCCGGCGGCGCCAACGGCGGCGTGGGGAGGGACAAGCCATCCTCGCCCATGGCGTGGCTGCGCCGCCGGATGGACCGG
CCGGTGCGCCGGGTCCTGCC

Product: transcriptional regulatory protein ompR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MLRPSVHAEAGHEPGQDVMGTDGRDNAVRDGSIAGAHILVVDDDPRLRRLLQRYLTEQGFRISAAASAAEARQVLGFMQP
DAMVLDVTMPGENGLLLTRALRQEGQDLPILLLTARGEPEDRITGLEAGADDYLGKPFEPRELLLRLKAHLRRFAPPPPS
DNLRVVRLGGLEFDPARGLLSGPEGSVHLTGGEIALLTVLARRPNETLSRDEIARVLDMEEIGERAVDVQVTRLRRRIEP
DPREPRFLQTVRGKGYVLKPGL

Sequences:

>Translated_262_residues
MLRPSVHAEAGHEPGQDVMGTDGRDNAVRDGSIAGAHILVVDDDPRLRRLLQRYLTEQGFRISAAASAAEARQVLGFMQP
DAMVLDVTMPGENGLLLTRALRQEGQDLPILLLTARGEPEDRITGLEAGADDYLGKPFEPRELLLRLKAHLRRFAPPPPS
DNLRVVRLGGLEFDPARGLLSGPEGSVHLTGGEIALLTVLARRPNETLSRDEIARVLDMEEIGERAVDVQVTRLRRRIEP
DPREPRFLQTVRGKGYVLKPGL
>Mature_262_residues
MLRPSVHAEAGHEPGQDVMGTDGRDNAVRDGSIAGAHILVVDDDPRLRRLLQRYLTEQGFRISAAASAAEARQVLGFMQP
DAMVLDVTMPGENGLLLTRALRQEGQDLPILLLTARGEPEDRITGLEAGADDYLGKPFEPRELLLRLKAHLRRFAPPPPS
DNLRVVRLGGLEFDPARGLLSGPEGSVHLTGGEIALLTVLARRPNETLSRDEIARVLDMEEIGERAVDVQVTRLRRRIEP
DPREPRFLQTVRGKGYVLKPGL

Specific function: Necessary for photosynthetic and respiratory growth. Probable promoter-specific protein mediating the interaction between DNA and RNA polymerase [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=46.9298245614035, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=38.2608695652174, Blast_Score=140, Evalue=6e-35,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=36.322869955157, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=33.920704845815, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=37.9464285714286, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=35.2678571428571, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=37.0689655172414, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=34.2222222222222, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=34.5291479820628, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1790860, Length=230, Percent_Identity=33.9130434782609, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=33.920704845815, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87082012, Length=226, Percent_Identity=32.3008849557522, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=28.3261802575107, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=31.8385650224215, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790299, Length=105, Percent_Identity=34.2857142857143, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=34.2592592592593, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI145693157, Length=113, Percent_Identity=38.9380530973451, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787487, Length=107, Percent_Identity=33.6448598130841, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1788713, Length=117, Percent_Identity=35.8974358974359, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788521, Length=211, Percent_Identity=31.2796208530806, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28855; Mature: 28855

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPSVHAEAGHEPGQDVMGTDGRDNAVRDGSIAGAHILVVDDDPRLRRLLQRYLTEQGF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC
RISAAASAAEARQVLGFMQPDAMVLDVTMPGENGLLLTRALRQEGQDLPILLLTARGEPE
EEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEHHHHHCCCCCCEEEEEECCCCH
DRITGLEAGADDYLGKPFEPRELLLRLKAHLRRFAPPPPSDNLRVVRLGGLEFDPARGLL
HHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCCC
SGPEGSVHLTGGEIALLTVLARRPNETLSRDEIARVLDMEEIGERAVDVQVTRLRRRIEP
CCCCCCEEECCCCEEEHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
DPREPRFLQTVRGKGYVLKPGL
CCCCCHHHHHHCCCCEEECCCC
>Mature Secondary Structure
MLRPSVHAEAGHEPGQDVMGTDGRDNAVRDGSIAGAHILVVDDDPRLRRLLQRYLTEQGF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC
RISAAASAAEARQVLGFMQPDAMVLDVTMPGENGLLLTRALRQEGQDLPILLLTARGEPE
EEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEHHHHHCCCCCCEEEEEECCCCH
DRITGLEAGADDYLGKPFEPRELLLRLKAHLRRFAPPPPSDNLRVVRLGGLEFDPARGLL
HHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCCC
SGPEGSVHLTGGEIALLTVLARRPNETLSRDEIARVLDMEEIGERAVDVQVTRLRRRIEP
CCCCCCEEECCCCEEEHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
DPREPRFLQTVRGKGYVLKPGL
CCCCCHHHHHHCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]