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The map label for this gene is merR

Identifier: 162148844

GI number: 162148844

Start: 3171453

End: 3172148

Strand: Reverse

Name: merR

Synonym: GDI_3073

Alternate gene names: NA

Gene position: 3172148-3171453 (Counterclockwise)

Preceding gene: 162148845

Following gene: 162148839

Centisome position: 80.43

GC content: 67.82

Gene sequence:

>696_bases
ATGAGCACCGCCGGCCCAGTCCGGGGATCAGGCCAGGGATATTGGCAGGATGCCGACATGCCCGGCCTGGGCGAGGCAGG
GCCGCAGGCGGCCGAGGACGGCGCGGCTGACGGCATGGCTGACGGGGCGGCCCGCCTGAAGAAGGCGCCGCATGCCTTCC
GCACGATCAGCGAGGTCGCGGACGAACTGCACGTTCCGCAGCATGTGCTGCGTTTCTGGGAAACACGCTTCACCCAGGTG
CGCCCGCTGAAGCGCGGGGGCGGCCGACGCTATTACCGCCCTGACGATATCGAATTGCTGCGCCGGATCGCCGACCTGCT
TTACGTGCAGGGCTACACGATCAAGGGCGTGCAGCGGATGCTGCGCGAGGGCGACACCGGCGTTCCCACCACCCAGGCCG
CGCCCGAATCGGGGGAAGGGGAGGACCTGTTCCTGTCCCCGGACATCTCGGTGGTTCCGGAAGACGAGTCCGGAATGGAC
GAGGCGCGTGGTGGAAGCGAGGCCGTGCGGGGCGAGGAGATCGAGATGACCCTGGTGCATCGGAACGAGGCAGCCCCCCC
TGCGCAGTCGCCTGAAGATGCGGCGGCGGACGCGGCGGAGATCGAGCGAATCCTGAGCGAAAACCAGGTCCTGAAAGAGA
ATCTGCGCGGGATTCTGGTGGAGTTGCGGGCCCTGCGGCGGCTGATTCCAGTCTGA

Upstream 100 bases:

>100_bases
TGCCGATCCTGCCGCGCTCGGTGCTGGTCTTCCGGCCCAGCCAGTTGCTGCGTGCGCGGGTGAATGGCGGCCCGGTCGAC
GGGATCGAGGATGACGGCGA

Downstream 100 bases:

>100_bases
TTCGGATTCGGTGCCGAACACGGGTTGCGGTTCGCGGCGGGCGCTGCTACACGGCGTGTCGTCGCAGACGGACGGGCAGT
AGCGCAGCCTGGTAGCGCAT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSTAGPVRGSGQGYWQDADMPGLGEAGPQAAEDGAADGMADGAARLKKAPHAFRTISEVADELHVPQHVLRFWETRFTQV
RPLKRGGGRRYYRPDDIELLRRIADLLYVQGYTIKGVQRMLREGDTGVPTTQAAPESGEGEDLFLSPDISVVPEDESGMD
EARGGSEAVRGEEIEMTLVHRNEAAPPAQSPEDAAADAAEIERILSENQVLKENLRGILVELRALRRLIPV

Sequences:

>Translated_231_residues
MSTAGPVRGSGQGYWQDADMPGLGEAGPQAAEDGAADGMADGAARLKKAPHAFRTISEVADELHVPQHVLRFWETRFTQV
RPLKRGGGRRYYRPDDIELLRRIADLLYVQGYTIKGVQRMLREGDTGVPTTQAAPESGEGEDLFLSPDISVVPEDESGMD
EARGGSEAVRGEEIEMTLVHRNEAAPPAQSPEDAAADAAEIERILSENQVLKENLRGILVELRALRRLIPV
>Mature_230_residues
STAGPVRGSGQGYWQDADMPGLGEAGPQAAEDGAADGMADGAARLKKAPHAFRTISEVADELHVPQHVLRFWETRFTQVR
PLKRGGGRRYYRPDDIELLRRIADLLYVQGYTIKGVQRMLREGDTGVPTTQAAPESGEGEDLFLSPDISVVPEDESGMDE
ARGGSEAVRGEEIEMTLVHRNEAAPPAQSPEDAAADAAEIERILSENQVLKENLRGILVELRALRRLIPV

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 25179; Mature: 25048

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAGPVRGSGQGYWQDADMPGLGEAGPQAAEDGAADGMADGAARLKKAPHAFRTISEVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
DELHVPQHVLRFWETRFTQVRPLKRGGGRRYYRPDDIELLRRIADLLYVQGYTIKGVQRM
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
LREGDTGVPTTQAAPESGEGEDLFLSPDISVVPEDESGMDEARGGSEAVRGEEIEMTLVH
HHCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCHHHCCCCHHHCCCCEEEEEEE
RNEAAPPAQSPEDAAADAAEIERILSENQVLKENLRGILVELRALRRLIPV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STAGPVRGSGQGYWQDADMPGLGEAGPQAAEDGAADGMADGAARLKKAPHAFRTISEVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
DELHVPQHVLRFWETRFTQVRPLKRGGGRRYYRPDDIELLRRIADLLYVQGYTIKGVQRM
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
LREGDTGVPTTQAAPESGEGEDLFLSPDISVVPEDESGMDEARGGSEAVRGEEIEMTLVH
HHCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCHHHCCCCHHHCCCCEEEEEEE
RNEAAPPAQSPEDAAADAAEIERILSENQVLKENLRGILVELRALRRLIPV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1961742 [H]