Click here to switch to the map view.

The map label for this gene is 162148840

Identifier: 162148840

GI number: 162148840

Start: 3166531

End: 3167499

Strand: Direct

Name: 162148840

Synonym: GDI_3069

Alternate gene names: NA

Gene position: 3166531-3167499 (Clockwise)

Preceding gene: 162148835

Following gene: 162148841

Centisome position: 80.28

GC content: 69.87

Gene sequence:

>969_bases
TTGATTTGCAAACAGCGTGCCACACGACGGGGGCCGGAAAGCGGCATTGTCACGATCGGACCCGCCCGGTATGGCAGGCA
CACGCATCAGGAGCAGACCGGCATGACATCGGACGCCGCTTCCTTTTTCCGGCACCTTGAATCCTGCAACACGGCCCGCC
TGCCCGGGGACCGCACGCCCTTCCGGTTCGGCAGCCAGAAGGCGGACGAGGCACCCTCCGGCTGGATTGCCCCCGCCCTG
GTTCCGGAACTGGAGCGGCTCGGCCTGCCCCGGCGCGCGGGCGCGCTGGTGCTGGACGACCCGGCCCGGCTGGAATCGCT
GGGCGAGGACCTGGCGGCGTCCGGCCTCTACCGCTCGCATCACGAACTGTTCGATGTCGCGCCCACGGCCGACGGGCCGG
CGATCGCACGGATCGACCGGGGGGCGCTGCCGCTGTTCGGGCTGATCGCGCATGGCGTGCACATGAACGGGCTGGTCCGG
CGCGCGGACGGGCTGCATCTGTGGACGGGGCGCCGTGCGATGGACAAGCGCCTGGACCCGGGCAAGCTGGACCATCTGGT
CGCCGGCGGCATTCCGGCCGGCCACACCCCGGAACAGGCGCTGCACAAGGAAGCGGCGGAAGAAGCCAGCATTCCCCCTG
ACCTGATCGCCCGGGCCGTGCCCACGGCGCGCATCCGCTACGCCATGGAACGGCCCGAGGGCCTGCGCCGCGACGTGCTG
CATTGCTACGACCTGGACCTGCCGCCCGACTTCACGCCCGCTCCCGCGGACGGCGAGGTCGAATTCTTCACGCTGATCCC
CCTGCGCGAGGCATACCGGATCGTGCGGGACAGCGACGAGTTCAAGTTCAACGTCAACCTGGTCCTGATCGACCTGTTCC
TGCGCCACGGCATGATCGACCCGGATAGTGTGGAGGGACGCCGGCTGCGCGCGGGGCTGGACGGACGCGACACTCCGGCC
TTCGCATGA

Upstream 100 bases:

>100_bases
AGGGCAGCAGCGCGCGCAGGGTCTCGCGCACCGGGCGTTCCGGCGCGCGCCCGGTATGGGATGGGGGCGGTGTCATGCCA
CTGGATGTGGCATGCGCGCG

Downstream 100 bases:

>100_bases
GGGCGATACCGATCCTTGGCCTGCTGGTCCTCGCCACGCTGGCAGGCTGCGCGCCCGCGTCCCGGGACGAGGCCCTGTGC
GCCCGTTTCGGCGCGCATCG

Product: nucleoside diphosphate

Products: AMP; thiamine diphosphate

Alternate protein names: Thiamin Pyrophosphokinase; NUDIX Domain-Containing Protein; Nucleoside Diphosphate; Thiamine Pyrophosphokinase; Nucleoside Diphosphate Hydrolase Protein; NTP Pyrophosphohydrolase; MutT/Nudix Family Protein; NUDIX Domain Family Protein; Nudix Family Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; NUDIX Domain-Containing; Hydrolase NUDIX Family

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MICKQRATRRGPESGIVTIGPARYGRHTHQEQTGMTSDAASFFRHLESCNTARLPGDRTPFRFGSQKADEAPSGWIAPAL
VPELERLGLPRRAGALVLDDPARLESLGEDLAASGLYRSHHELFDVAPTADGPAIARIDRGALPLFGLIAHGVHMNGLVR
RADGLHLWTGRRAMDKRLDPGKLDHLVAGGIPAGHTPEQALHKEAAEEASIPPDLIARAVPTARIRYAMERPEGLRRDVL
HCYDLDLPPDFTPAPADGEVEFFTLIPLREAYRIVRDSDEFKFNVNLVLIDLFLRHGMIDPDSVEGRRLRAGLDGRDTPA
FA

Sequences:

>Translated_322_residues
MICKQRATRRGPESGIVTIGPARYGRHTHQEQTGMTSDAASFFRHLESCNTARLPGDRTPFRFGSQKADEAPSGWIAPAL
VPELERLGLPRRAGALVLDDPARLESLGEDLAASGLYRSHHELFDVAPTADGPAIARIDRGALPLFGLIAHGVHMNGLVR
RADGLHLWTGRRAMDKRLDPGKLDHLVAGGIPAGHTPEQALHKEAAEEASIPPDLIARAVPTARIRYAMERPEGLRRDVL
HCYDLDLPPDFTPAPADGEVEFFTLIPLREAYRIVRDSDEFKFNVNLVLIDLFLRHGMIDPDSVEGRRLRAGLDGRDTPA
FA
>Mature_322_residues
MICKQRATRRGPESGIVTIGPARYGRHTHQEQTGMTSDAASFFRHLESCNTARLPGDRTPFRFGSQKADEAPSGWIAPAL
VPELERLGLPRRAGALVLDDPARLESLGEDLAASGLYRSHHELFDVAPTADGPAIARIDRGALPLFGLIAHGVHMNGLVR
RADGLHLWTGRRAMDKRLDPGKLDHLVAGGIPAGHTPEQALHKEAAEEASIPPDLIARAVPTARIRYAMERPEGLRRDVL
HCYDLDLPPDFTPAPADGEVEFFTLIPLREAYRIVRDSDEFKFNVNLVLIDLFLRHGMIDPDSVEGRRLRAGLDGRDTPA
FA

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322602, Length=221, Percent_Identity=28.5067873303167, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.6.2

Molecular weight: Translated: 35407; Mature: 35407

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICKQRATRRGPESGIVTIGPARYGRHTHQEQTGMTSDAASFFRHLESCNTARLPGDRTP
CCCCHHHHCCCCCCCEEEECCHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC
FRFGSQKADEAPSGWIAPALVPELERLGLPRRAGALVLDDPARLESLGEDLAASGLYRSH
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
HELFDVAPTADGPAIARIDRGALPLFGLIAHGVHMNGLVRRADGLHLWTGRRAMDKRLDP
HHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCHHHHHHHHHCCCCEEECCCHHHHHCCCC
GKLDHLVAGGIPAGHTPEQALHKEAAEEASIPPDLIARAVPTARIRYAMERPEGLRRDVL
CHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHH
HCYDLDLPPDFTPAPADGEVEFFTLIPLREAYRIVRDSDEFKFNVNLVLIDLFLRHGMID
HHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCC
PDSVEGRRLRAGLDGRDTPAFA
CCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MICKQRATRRGPESGIVTIGPARYGRHTHQEQTGMTSDAASFFRHLESCNTARLPGDRTP
CCCCHHHHCCCCCCCEEEECCHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC
FRFGSQKADEAPSGWIAPALVPELERLGLPRRAGALVLDDPARLESLGEDLAASGLYRSH
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
HELFDVAPTADGPAIARIDRGALPLFGLIAHGVHMNGLVRRADGLHLWTGRRAMDKRLDP
HHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCHHHHHHHHHCCCCEEECCCHHHHHCCCC
GKLDHLVAGGIPAGHTPEQALHKEAAEEASIPPDLIARAVPTARIRYAMERPEGLRRDVL
CHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHH
HCYDLDLPPDFTPAPADGEVEFFTLIPLREAYRIVRDSDEFKFNVNLVLIDLFLRHGMID
HHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCC
PDSVEGRRLRAGLDGRDTPAFA
CCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; thiamine

Specific reaction: ATP + thiamine = AMP + thiamine diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA