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The map label for this gene is ycbL [C]

Identifier: 162148834

GI number: 162148834

Start: 3158912

End: 3159760

Strand: Direct

Name: ycbL [C]

Synonym: GDI_3063

Alternate gene names: 162148834

Gene position: 3158912-3159760 (Clockwise)

Preceding gene: 162148833

Following gene: 162148835

Centisome position: 80.09

GC content: 71.97

Gene sequence:

>849_bases
GTGCGCGAGGCCGCGCCGCCGGTCGGGCAGCCGCTGGCGGCCGCACCCGGCATCCGGCGGATCGTCGCCCCCAATCCCGG
AGCGATGACCGGGAACGGCACCAATTGCTGGCTGGTCGATCATCCCGGGGGCACCGCGATCATCGATCCCGGATCGGACG
ATCCCGCCCACCTGCACGCCATTCGCGCAGCGGCGGGTCCCGTCACGCATATCCTGCTGACCCATACGCATCGCGATCAT
CTGACGGGCGCGCGCCCCCTGGGGGCCGCGACGGGCGCGCCGGTCTGCGGCTTTCGCCATAGCGCCGTCGCCGATTTCAC
CCCCGATATCGCACTGGATGACGGCTCCGCCATCGCCGGCCTGACGGCCGTGCATACCCCCGGCCACGCCACCGATCATC
TCTGCTTTGTCACGGCGGACGGCATCGTGTTCACCGGGGACCACATCATGGGCTGGTCCACGACGATGGTCCCCCCGGCC
CCGCAGGGTTCGGTCCGCCAGTTCCTCGACGGGCTGGCGCGAATCGATGCGCTGGACGCGCGCCTGCTGCTGCCTGCCCA
TGGGCCCTCGATCACCGCCCCCGCCGCCTGCATCCGGGCCCTGATCGACCATCGCCTGACGCGCGAGGCCACCATCCTGG
CGGCCCTGGATGCCGTCCCGGCCACGCTGGAGGACATGATGCGCCGCGTCTATCGCGCCGTGCCCCCGGCCCTGCATCGC
GCGGCGGAGATGAACCTGCTGGCGCATCTGGAAAAATTGCGGGAGGACGGGCACGCGGTTCACGGGCATGATGGCTGGCG
CGTCGCCCCCGGCCGCCCCGGCCGCGCGGGCAGCCCCCATCCGGCATAA

Upstream 100 bases:

>100_bases
TGTTCAATCTGGTCCGTGAAACCGGCATGGCGATCATGCACCATGTCGGGGCCTTCGGCTGAACGCTTCGCCCGAACGCC
GCACCCGCCGGACCTGGCAG

Downstream 100 bases:

>100_bases
GCCCGGTATTCCCCCCCTCTCCGGCCCCTGCGTGCCGGACGATCCTGTTCGGAGAGAGAGTTGAAGACACGCCTGTCGCT
TTTGCTATCGGCCTCGCTGC

Product: metallo-beta-lactamase superfamily protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Glyoxylase; Beta-Lactamase Family Protein; Beta-Lactamase-Like Protein; Beta-Lactamase; Hydroxyacylglutathione Hydrolase; Metallo-Beta-Lactamase Domain Protein; Hydrolase Protein; Zinc-Dependent Hydrolase; Hydrolase/Glyoxylase; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Family Hydrolase; Nudix Hydrolase; NUDIX HydrolaseBeta-Lactamase-Like; Beta-Lactamase Class B; Beta-Lactamase-Like Hydrolase

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MREAAPPVGQPLAAAPGIRRIVAPNPGAMTGNGTNCWLVDHPGGTAIIDPGSDDPAHLHAIRAAAGPVTHILLTHTHRDH
LTGARPLGAATGAPVCGFRHSAVADFTPDIALDDGSAIAGLTAVHTPGHATDHLCFVTADGIVFTGDHIMGWSTTMVPPA
PQGSVRQFLDGLARIDALDARLLLPAHGPSITAPAACIRALIDHRLTREATILAALDAVPATLEDMMRRVYRAVPPALHR
AAEMNLLAHLEKLREDGHAVHGHDGWRVAPGRPGRAGSPHPA

Sequences:

>Translated_282_residues
MREAAPPVGQPLAAAPGIRRIVAPNPGAMTGNGTNCWLVDHPGGTAIIDPGSDDPAHLHAIRAAAGPVTHILLTHTHRDH
LTGARPLGAATGAPVCGFRHSAVADFTPDIALDDGSAIAGLTAVHTPGHATDHLCFVTADGIVFTGDHIMGWSTTMVPPA
PQGSVRQFLDGLARIDALDARLLLPAHGPSITAPAACIRALIDHRLTREATILAALDAVPATLEDMMRRVYRAVPPALHR
AAEMNLLAHLEKLREDGHAVHGHDGWRVAPGRPGRAGSPHPA
>Mature_282_residues
MREAAPPVGQPLAAAPGIRRIVAPNPGAMTGNGTNCWLVDHPGGTAIIDPGSDDPAHLHAIRAAAGPVTHILLTHTHRDH
LTGARPLGAATGAPVCGFRHSAVADFTPDIALDDGSAIAGLTAVHTPGHATDHLCFVTADGIVFTGDHIMGWSTTMVPPA
PQGSVRQFLDGLARIDALDARLLLPAHGPSITAPAACIRALIDHRLTREATILAALDAVPATLEDMMRRVYRAVPPALHR
AAEMNLLAHLEKLREDGHAVHGHDGWRVAPGRPGRAGSPHPA

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7705793, Length=246, Percent_Identity=27.2357723577236, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17537503, Length=258, Percent_Identity=26.7441860465116, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI193205216, Length=258, Percent_Identity=26.7441860465116, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI20129357, Length=264, Percent_Identity=30.6818181818182, Blast_Score=112, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29364; Mature: 29364

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREAAPPVGQPLAAAPGIRRIVAPNPGAMTGNGTNCWLVDHPGGTAIIDPGSDDPAHLHA
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHH
IRAAAGPVTHILLTHTHRDHLTGARPLGAATGAPVCGFRHSAVADFTPDIALDDGSAIAG
HHHHCCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEECCCCCEEC
LTAVHTPGHATDHLCFVTADGIVFTGDHIMGWSTTMVPPAPQGSVRQFLDGLARIDALDA
EEEECCCCCCCCCEEEEEECCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
RLLLPAHGPSITAPAACIRALIDHRLTREATILAALDAVPATLEDMMRRVYRAVPPALHR
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AAEMNLLAHLEKLREDGHAVHGHDGWRVAPGRPGRAGSPHPA
HHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MREAAPPVGQPLAAAPGIRRIVAPNPGAMTGNGTNCWLVDHPGGTAIIDPGSDDPAHLHA
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHH
IRAAAGPVTHILLTHTHRDHLTGARPLGAATGAPVCGFRHSAVADFTPDIALDDGSAIAG
HHHHCCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEECCCCCEEC
LTAVHTPGHATDHLCFVTADGIVFTGDHIMGWSTTMVPPAPQGSVRQFLDGLARIDALDA
EEEECCCCCCCCCEEEEEECCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
RLLLPAHGPSITAPAACIRALIDHRLTREATILAALDAVPATLEDMMRRVYRAVPPALHR
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AAEMNLLAHLEKLREDGHAVHGHDGWRVAPGRPGRAGSPHPA
HHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA