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The map label for this gene is gatC

Identifier: 162148751

GI number: 162148751

Start: 3068785

End: 3069072

Strand: Reverse

Name: gatC

Synonym: GDI_2979

Alternate gene names: 162148751

Gene position: 3069072-3068785 (Counterclockwise)

Preceding gene: 162148753

Following gene: 162148750

Centisome position: 77.81

GC content: 65.28

Gene sequence:

>288_bases
ATGTCGCTTGATCCCGCGACCGTCCGACGTATCGCCAGGCTGGCGCGGATAGGTATCGACGAATCCGACCTGCACGCCCT
CCAGGGGGAGTTGAACGGCATTCTCGGCTGGATCGAGCAATTGAACGAGGTGGATATCGACGGCGTCGAACCGATGGTCG
GCACCGGACATGCCGCCCTGCGCATGCGCGAGGACGTGGTGACCGACGGGGCCGCGCGCGATGCCGTCCTGTCGAACGCG
CCCGACGCGGCGGGGCCGTTCTATACCGTGCCGAAGGTGGTTGAATAA

Upstream 100 bases:

>100_bases
TCTGGTGCATGTTGAACAGGGGCATGGTCTGGGTCTATGGTCCGCGCGGTGTCCTGCCGGCAGGATATTCCCCTCAGATC
ATGATGGAAAGTTATGCTTC

Downstream 100 bases:

>100_bases
TGCTGACCGAACTGACGATCGCCGCGGCCCGGGACGGGCTGGGGCGCCGGGAATTTTCCGCCGTCGAACTGGTCGGCGCC
CACGTGGCGGCCATCGAGAA

Product: glutamyl-tRNA(Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSLDPATVRRIARLARIGIDESDLHALQGELNGILGWIEQLNEVDIDGVEPMVGTGHAALRMREDVVTDGAARDAVLSNA
PDAAGPFYTVPKVVE

Sequences:

>Translated_95_residues
MSLDPATVRRIARLARIGIDESDLHALQGELNGILGWIEQLNEVDIDGVEPMVGTGHAALRMREDVVTDGAARDAVLSNA
PDAAGPFYTVPKVVE
>Mature_94_residues
SLDPATVRRIARLARIGIDESDLHALQGELNGILGWIEQLNEVDIDGVEPMVGTGHAALRMREDVVTDGAARDAVLSNAP
DAAGPFYTVPKVVE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_GLUDA (A9HRJ1)

Other databases:

- EMBL:   AM889285
- EMBL:   CP001189
- RefSeq:   YP_001603212.1
- RefSeq:   YP_002277712.1
- ProteinModelPortal:   A9HRJ1
- SMR:   A9HRJ1
- GeneID:   5791802
- GeneID:   6976816
- GenomeReviews:   AM889285_GR
- GenomeReviews:   CP001189_GR
- KEGG:   gdj:Gdia_3371
- HOGENOM:   HBG586403
- OMA:   VTAVEPM
- ProtClustDB:   CLSK936698
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10149; Mature: 10017

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDPATVRRIARLARIGIDESDLHALQGELNGILGWIEQLNEVDIDGVEPMVGTGHAAL
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
RMREDVVTDGAARDAVLSNAPDAAGPFYTVPKVVE
HHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLDPATVRRIARLARIGIDESDLHALQGELNGILGWIEQLNEVDIDGVEPMVGTGHAAL
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
RMREDVVTDGAARDAVLSNAPDAAGPFYTVPKVVE
HHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA