| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is yceG [H]
Identifier: 162148712
GI number: 162148712
Start: 3028666
End: 3029685
Strand: Reverse
Name: yceG [H]
Synonym: GDI_2940
Alternate gene names: 162148712
Gene position: 3029685-3028666 (Counterclockwise)
Preceding gene: 162148713
Following gene: 162148702
Centisome position: 76.81
GC content: 69.8
Gene sequence:
>1020_bases ATGTTCAAGCGCCTCATTATAACCGGCCTGCTGCTGCTGGCCCTCCTGTGTATGGGGGCGGGCGGCGTCGCGGGCTGGGC ATGGTGGCTGTATGGCGCGCAGGGTCCGGCCACGCAGGCCCGTGCGGTGGTCGTGCCCCGGGGCGGCCTGGGCAGCACCG TCGCCACCTTGCAGCATGCGCGGGTGATCCGGGACGGACGCCTGGCCGCACTGGTCTTTCGCGTGGCAGTGCATCTGACG CGGCGTGACGGCGTCCTGCATGCGGCGGAACTGGAATTCCCGGCCTATGGCTCGATTCGTGACGCGCTGTTCGTGCTGCG CCACGCCCGGCCTGTGCTGCATCCCATAACGGTGCCCGAGGGCCTGTCGGTCATCCAGGTCATCGACCTCGTCGATCGCG CACCGGTGCTGTCCGGCCCCATGCCGTCGCTGGCCGAGGGCGATGTCCTGCCGCAGACCTATGATTATGAATGGGGCACG TCCCGCGCCGCGTTGCTGGCACGGATGCGGGGCGCGATGGACACGACCCTGGATGCGGTCTGGCGCGATCGCACGCCGGT GCCCGAAATACCCGACCGGCGCACCCTGCTGATCCTGGCATCGATGGTCGAGCGCGAAACGGCGATTCCCGCCGAGCGCA AGCAGGTGGCGCGCGTCTTCATCAACCGGCTGCGTCTCGGCATGCGCCTGCAATCCGACCCGACGGTGGTCTATGGCATC AATCACGGGGCAGGGCCGCTAGGCCACGCGCTGACCCGCGCCGAACTGGCGGCGCCCAGCGCCTACAATACCTATACCCT GCCGGGCCTGCCCGTCGGCCCGATCTGTTCGCCGGGCCGCGCCGCGCTGGACGCGGTGGCGCACCCGGCGGACGGCGACG CCCTGTATTTCGTCGCCGACGGCACGGGCGGCCACGTCTTCGCCGGTAGCCTGGCCGATCATAACCGCAATGTCGGTGCC TATCGGGCGCGTAAGGAACCGCAGGGGGCCCTTACGGGGGCGACAGGGGCTGGGCGTTGA
Upstream 100 bases:
>100_bases GATATCGCCCTGTCGAACAGCTTCGGCTTCGGGGGCACCAACGCCAGCGTCATCCTGCGCGGCGTCTGACCGGCCGCGCC ATCGGCCGCCGACAGGCAGG
Downstream 100 bases:
>100_bases TGGGGCCGGATGACGGCGCGGGGGTGACCTGCGCCGGTTCACCGCCCGCCGGCGAATAGGCCCCCGGCGGGCCCGCCGGG GGCGGCATCGCGGGTGCGGG
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MFKRLIITGLLLLALLCMGAGGVAGWAWWLYGAQGPATQARAVVVPRGGLGSTVATLQHARVIRDGRLAALVFRVAVHLT RRDGVLHAAELEFPAYGSIRDALFVLRHARPVLHPITVPEGLSVIQVIDLVDRAPVLSGPMPSLAEGDVLPQTYDYEWGT SRAALLARMRGAMDTTLDAVWRDRTPVPEIPDRRTLLILASMVERETAIPAERKQVARVFINRLRLGMRLQSDPTVVYGI NHGAGPLGHALTRAELAAPSAYNTYTLPGLPVGPICSPGRAALDAVAHPADGDALYFVADGTGGHVFAGSLADHNRNVGA YRARKEPQGALTGATGAGR
Sequences:
>Translated_339_residues MFKRLIITGLLLLALLCMGAGGVAGWAWWLYGAQGPATQARAVVVPRGGLGSTVATLQHARVIRDGRLAALVFRVAVHLT RRDGVLHAAELEFPAYGSIRDALFVLRHARPVLHPITVPEGLSVIQVIDLVDRAPVLSGPMPSLAEGDVLPQTYDYEWGT SRAALLARMRGAMDTTLDAVWRDRTPVPEIPDRRTLLILASMVERETAIPAERKQVARVFINRLRLGMRLQSDPTVVYGI NHGAGPLGHALTRAELAAPSAYNTYTLPGLPVGPICSPGRAALDAVAHPADGDALYFVADGTGGHVFAGSLADHNRNVGA YRARKEPQGALTGATGAGR >Mature_339_residues MFKRLIITGLLLLALLCMGAGGVAGWAWWLYGAQGPATQARAVVVPRGGLGSTVATLQHARVIRDGRLAALVFRVAVHLT RRDGVLHAAELEFPAYGSIRDALFVLRHARPVLHPITVPEGLSVIQVIDLVDRAPVLSGPMPSLAEGDVLPQTYDYEWGT SRAALLARMRGAMDTTLDAVWRDRTPVPEIPDRRTLLILASMVERETAIPAERKQVARVFINRLRLGMRLQSDPTVVYGI NHGAGPLGHALTRAELAAPSAYNTYTLPGLPVGPICSPGRAALDAVAHPADGDALYFVADGTGGHVFAGSLADHNRNVGA YRARKEPQGALTGATGAGR
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=277, Percent_Identity=36.101083032491, Blast_Score=176, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36134; Mature: 36134
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRLIITGLLLLALLCMGAGGVAGWAWWLYGAQGPATQARAVVVPRGGLGSTVATLQHA CHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCCCCCCCEEEEEECCCCCHHHHHHHHH RVIRDGRLAALVFRVAVHLTRRDGVLHAAELEFPAYGSIRDALFVLRHARPVLHPITVPE HHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHCCCCCCCC GLSVIQVIDLVDRAPVLSGPMPSLAEGDVLPQTYDYEWGTSRAALLARMRGAMDTTLDAV CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WRDRTPVPEIPDRRTLLILASMVERETAIPAERKQVARVFINRLRLGMRLQSDPTVVYGI HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEECCCCCEEEEC NHGAGPLGHALTRAELAAPSAYNTYTLPGLPVGPICSPGRAALDAVAHPADGDALYFVAD CCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEE GTGGHVFAGSLADHNRNVGAYRARKEPQGALTGATGAGR CCCCEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure MFKRLIITGLLLLALLCMGAGGVAGWAWWLYGAQGPATQARAVVVPRGGLGSTVATLQHA CHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCCCCCCCEEEEEECCCCCHHHHHHHHH RVIRDGRLAALVFRVAVHLTRRDGVLHAAELEFPAYGSIRDALFVLRHARPVLHPITVPE HHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHCCCCCCCC GLSVIQVIDLVDRAPVLSGPMPSLAEGDVLPQTYDYEWGTSRAALLARMRGAMDTTLDAV CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WRDRTPVPEIPDRRTLLILASMVERETAIPAERKQVARVFINRLRLGMRLQSDPTVVYGI HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEECCCCCEEEEC NHGAGPLGHALTRAELAAPSAYNTYTLPGLPVGPICSPGRAALDAVAHPADGDALYFVAD CCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEE GTGGHVFAGSLADHNRNVGAYRARKEPQGALTGATGAGR CCCCEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]