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The map label for this gene is tetR [C]

Identifier: 162148690

GI number: 162148690

Start: 3003488

End: 3004108

Strand: Reverse

Name: tetR [C]

Synonym: GDI_2918

Alternate gene names: 162148690

Gene position: 3004108-3003488 (Counterclockwise)

Preceding gene: 162148691

Following gene: 162148689

Centisome position: 76.17

GC content: 60.87

Gene sequence:

>621_bases
GTGGCGCAGACAAAAATCAAGAAAAGGGGCGGGCGCCCCAACAATCGGGCGCACCTTCTCTCAGTTGCCAATACACTGTT
TATGAAATCCGGCTTTCGCGACGTCAGTGTCGATAGGATCAGCGAAGCCGCCAGCGTGACCAAACAGACGTTATACTACC
ATTTCGCCAATAAAGAGCAGCTGGTTGTCGAGGTCTTGGAAGAGCGTATAGACGACATCGAAGCCTCCCTGGCCGCAGCG
ATCAACGCGCATACCGCGCCGCGCGACCGCCTCAAGGCGATCTTCGACTGGCATACGGCCTGGTTCAACCAGCCGGATTT
CACGGGCTGTATGTTCTCGCGCGCCGCCTCCGAATACAAAGGCGAGCAGCGCGACATCGCCGAACTGGTCGAGTTACAGA
AACTCGAACTGAGACGCGCGATCCGCGCGCTGGTCGAAGCCTGCGGTGTGCCCCCGGCTCGCACGGACACCATCGCGCGG
TCGTTCCTCTGCCTTCTGGACGGCGCCGTAATCTCGGCCCAGATCCTGGGCGAACGGGACGCCGCTGACAACGTATGGCT
CACCGCCGAGACGATTCTTGCCGTCGAGGCCGGTCGCCCAATGGATCCAGCCGCTCCCTGA

Upstream 100 bases:

>100_bases
CATCCTCCGTTAGAACTGGCTCGCGAGCTAGACGCGACGGTCAGGGCGCGATACCCGGTTCGGGCGCCCGCGCCGCGCGT
GCGATAACGAGGTTGAGGAC

Downstream 100 bases:

>100_bases
TCCCGATCTACCGCCGGGTGCAGACGCCCGGATCGCCAGCCCGTTTTGCGCGTTTTCGCCTATACCATTTTGTGTGCGCC
GCTCTACGCCCGCGCCGACA

Product: transcription regulator tetR

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Tetr Family; Regulatory Protein Tetr; Transcription Regulator Protein; Transcription Regulator TetR; TetR-Family Protein Transcriptional Regulator; TetR/AcrR-Family Trancriptional Regulatory Protein

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MAQTKIKKRGGRPNNRAHLLSVANTLFMKSGFRDVSVDRISEAASVTKQTLYYHFANKEQLVVEVLEERIDDIEASLAAA
INAHTAPRDRLKAIFDWHTAWFNQPDFTGCMFSRAASEYKGEQRDIAELVELQKLELRRAIRALVEACGVPPARTDTIAR
SFLCLLDGAVISAQILGERDAADNVWLTAETILAVEAGRPMDPAAP

Sequences:

>Translated_206_residues
MAQTKIKKRGGRPNNRAHLLSVANTLFMKSGFRDVSVDRISEAASVTKQTLYYHFANKEQLVVEVLEERIDDIEASLAAA
INAHTAPRDRLKAIFDWHTAWFNQPDFTGCMFSRAASEYKGEQRDIAELVELQKLELRRAIRALVEACGVPPARTDTIAR
SFLCLLDGAVISAQILGERDAADNVWLTAETILAVEAGRPMDPAAP
>Mature_205_residues
AQTKIKKRGGRPNNRAHLLSVANTLFMKSGFRDVSVDRISEAASVTKQTLYYHFANKEQLVVEVLEERIDDIEASLAAAI
NAHTAPRDRLKAIFDWHTAWFNQPDFTGCMFSRAASEYKGEQRDIAELVELQKLELRRAIRALVEACGVPPARTDTIARS
FLCLLDGAVISAQILGERDAADNVWLTAETILAVEAGRPMDPAAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22837; Mature: 22706

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTKIKKRGGRPNNRAHLLSVANTLFMKSGFRDVSVDRISEAASVTKQTLYYHFANKEQ
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
LVVEVLEERIDDIEASLAAAINAHTAPRDRLKAIFDWHTAWFNQPDFTGCMFSRAASEYK
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GEQRDIAELVELQKLELRRAIRALVEACGVPPARTDTIARSFLCLLDGAVISAQILGERD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
AADNVWLTAETILAVEAGRPMDPAAP
CCCCEEEEHHHHEEEECCCCCCCCCC
>Mature Secondary Structure 
AQTKIKKRGGRPNNRAHLLSVANTLFMKSGFRDVSVDRISEAASVTKQTLYYHFANKEQ
CCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
LVVEVLEERIDDIEASLAAAINAHTAPRDRLKAIFDWHTAWFNQPDFTGCMFSRAASEYK
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GEQRDIAELVELQKLELRRAIRALVEACGVPPARTDTIARSFLCLLDGAVISAQILGERD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
AADNVWLTAETILAVEAGRPMDPAAP
CCCCEEEEHHHHEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA