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The map label for this gene is trbI [H]

Identifier: 162148678

GI number: 162148678

Start: 2990338

End: 2991474

Strand: Reverse

Name: trbI [H]

Synonym: GDI_2906

Alternate gene names: 162148678

Gene position: 2991474-2990338 (Counterclockwise)

Preceding gene: 162148679

Following gene: 162148677

Centisome position: 75.85

GC content: 66.4

Gene sequence:

>1137_bases
GTGCCTGACCTGCGTCTGAGGGCCGAACGGCCGCGCGTGGTGCGCCTGTCGCGGACCGTGATCTGGTCGCTCGGCGGGGT
CGGCGTCGTCGCCGTGGCGTTCGCTCTCGGCTATGCGCTGGAAGCCAGCCATCGACCGCCGTCGGCGCCCGCCGGCCCGG
AGAATGCGTCGCCGCCCTCGGCGGCGGGGCTGGACGCCCTGCCGAAAGATTATGCCGGCGTGCCGAAACTGGGACCGGCA
TTGCCCGGCGATCTCGGGCGACCAATCCTGCATGCGCAGGAGCAGGGGAAGTCGGTCCCCACCAGTGCGATCGGCAACGA
GGACGCGCGCCGGGCGCAGCAGGAGATCGACGCGGCCATCGGCAGCAAGCTCTTCGCCGGGATCGAGACCCGTGACCAGC
ATGAGGCTCAGGCGATGCCGGCAATGGCCTCGGGATCAGCCGATCCCAATCGAGACCGTGCCGATACCCGAGCGCAGGCC
GGAAACCGTGCCTTCCTGGCAGGCCAGCCCGATCGCCAGACCGTCAGTCCCGACCGGATCATGCCGGTGGCGTCCCCCTA
TGTGCTTCAGGCCGGGACGGTGATCGCCGGCGCGCTGAACACCAAGATCAGTTCCGACCTCCCGGGGCAGGTCGTCGGCC
ATGTAACCCAGAACGTGTATGACAGCCCGACCGGACGCATCCTGCTGGTTCCCCAGGGCAGCACCCTGTTCGGCGCCTAT
AACAGCGGCATTTCGTTCGGGCAGCAGCGCACGCAGATCATCTGGACCCGGCTGATCTTCCCGAACGGGGAGAGCCTGGT
GCTGGAGAAGCTGCCGGGTGCGGACGCCATCGGTCAGTCGGGTCTGTCGGACGAGGTGAACAACCATTGGGGCCAACTCT
TCAAGGCCGCCCTGGTGACCACCCTGCTCAGCGTTGGGTCGGAGGCGGGGACCAGCCAGAGCGAGAACAATCTCGCCCAG
GCGATCCGAAGTGGAGCCAGCAACGGATTTTCCATGGTCGGCAACCGGCTCGTGGATCGCTCGCTCGATATCCAGCCAAC
ATTGACCGATCGGCCGGGGCTGCCGTTCACGCTGGTCCTGTCGAGGGACTTAGTCCTTAAGCCCTATGTGAAACAAGGAG
ATAACCAGCATGGATAA

Upstream 100 bases:

>100_bases
GAAAGACGCACCGGAGCGGCCGGACGGACATCATTCGTCCGGCGAGCGAAATGCGCCTGGCGGCGCATCGTCAGCGTCTC
CGTCTCCGTCTCCGGCATCC

Downstream 100 bases:

>100_bases
GCTTCGGATCACCGCAATTCCCGACAGTCGCCCGGTGCGCATGACGGTGGCGTTTCCAGCCGAGATTCACCGCGACCTGC
TCCTCTATGCTCGCTTCCTG

Product: conjugal transfer protein trbI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MPDLRLRAERPRVVRLSRTVIWSLGGVGVVAVAFALGYALEASHRPPSAPAGPENASPPSAAGLDALPKDYAGVPKLGPA
LPGDLGRPILHAQEQGKSVPTSAIGNEDARRAQQEIDAAIGSKLFAGIETRDQHEAQAMPAMASGSADPNRDRADTRAQA
GNRAFLAGQPDRQTVSPDRIMPVASPYVLQAGTVIAGALNTKISSDLPGQVVGHVTQNVYDSPTGRILLVPQGSTLFGAY
NSGISFGQQRTQIIWTRLIFPNGESLVLEKLPGADAIGQSGLSDEVNNHWGQLFKAALVTTLLSVGSEAGTSQSENNLAQ
AIRSGASNGFSMVGNRLVDRSLDIQPTLTDRPGLPFTLVLSRDLVLKPYVKQGDNQHG

Sequences:

>Translated_378_residues
MPDLRLRAERPRVVRLSRTVIWSLGGVGVVAVAFALGYALEASHRPPSAPAGPENASPPSAAGLDALPKDYAGVPKLGPA
LPGDLGRPILHAQEQGKSVPTSAIGNEDARRAQQEIDAAIGSKLFAGIETRDQHEAQAMPAMASGSADPNRDRADTRAQA
GNRAFLAGQPDRQTVSPDRIMPVASPYVLQAGTVIAGALNTKISSDLPGQVVGHVTQNVYDSPTGRILLVPQGSTLFGAY
NSGISFGQQRTQIIWTRLIFPNGESLVLEKLPGADAIGQSGLSDEVNNHWGQLFKAALVTTLLSVGSEAGTSQSENNLAQ
AIRSGASNGFSMVGNRLVDRSLDIQPTLTDRPGLPFTLVLSRDLVLKPYVKQGDNQHG
>Mature_377_residues
PDLRLRAERPRVVRLSRTVIWSLGGVGVVAVAFALGYALEASHRPPSAPAGPENASPPSAAGLDALPKDYAGVPKLGPAL
PGDLGRPILHAQEQGKSVPTSAIGNEDARRAQQEIDAAIGSKLFAGIETRDQHEAQAMPAMASGSADPNRDRADTRAQAG
NRAFLAGQPDRQTVSPDRIMPVASPYVLQAGTVIAGALNTKISSDLPGQVVGHVTQNVYDSPTGRILLVPQGSTLFGAYN
SGISFGQQRTQIIWTRLIFPNGESLVLEKLPGADAIGQSGLSDEVNNHWGQLFKAALVTTLLSVGSEAGTSQSENNLAQA
IRSGASNGFSMVGNRLVDRSLDIQPTLTDRPGLPFTLVLSRDLVLKPYVKQGDNQHG

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 39760; Mature: 39629

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDLRLRAERPRVVRLSRTVIWSLGGVGVVAVAFALGYALEASHRPPSAPAGPENASPPS
CCCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AAGLDALPKDYAGVPKLGPALPGDLGRPILHAQEQGKSVPTSAIGNEDARRAQQEIDAAI
CCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHH
GSKLFAGIETRDQHEAQAMPAMASGSADPNRDRADTRAQAGNRAFLAGQPDRQTVSPDRI
HHHHHHCCCCCCHHHHHHCCHHHCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCC
MPVASPYVLQAGTVIAGALNTKISSDLPGQVVGHVTQNVYDSPTGRILLVPQGSTLFGAY
CCCCCCHHEECCCEEEHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEH
NSGISFGQQRTQIIWTRLIFPNGESLVLEKLPGADAIGQSGLSDEVNNHWGQLFKAALVT
HCCCHHCHHHHHEEEEEEECCCCCEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHH
TLLSVGSEAGTSQSENNLAQAIRSGASNGFSMVGNRLVDRSLDIQPTLTDRPGLPFTLVL
HHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
SRDLVLKPYVKQGDNQHG
CCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
PDLRLRAERPRVVRLSRTVIWSLGGVGVVAVAFALGYALEASHRPPSAPAGPENASPPS
CCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AAGLDALPKDYAGVPKLGPALPGDLGRPILHAQEQGKSVPTSAIGNEDARRAQQEIDAAI
CCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHH
GSKLFAGIETRDQHEAQAMPAMASGSADPNRDRADTRAQAGNRAFLAGQPDRQTVSPDRI
HHHHHHCCCCCCHHHHHHCCHHHCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCC
MPVASPYVLQAGTVIAGALNTKISSDLPGQVVGHVTQNVYDSPTGRILLVPQGSTLFGAY
CCCCCCHHEECCCEEEHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEH
NSGISFGQQRTQIIWTRLIFPNGESLVLEKLPGADAIGQSGLSDEVNNHWGQLFKAALVT
HCCCHHCHHHHHEEEEEEECCCCCEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHH
TLLSVGSEAGTSQSENNLAQAIRSGASNGFSMVGNRLVDRSLDIQPTLTDRPGLPFTLVL
HHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
SRDLVLKPYVKQGDNQHG
CCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]