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The map label for this gene is tetR

Identifier: 162148671

GI number: 162148671

Start: 2984252

End: 2984833

Strand: Reverse

Name: tetR

Synonym: GDI_2898

Alternate gene names: NA

Gene position: 2984833-2984252 (Counterclockwise)

Preceding gene: 162148673

Following gene: 162148667

Centisome position: 75.68

GC content: 65.81

Gene sequence:

>582_bases
ATGTCCGAGCTCCGTGACCCCATCCGTTCGGGACCACGCCCCGGTGGGCGTAGTCTGAGGGTGCAGGAAGCCGTGCATGC
GGCAGTGACCGCGCTGATCGAGGAAATCGGCCGCGAAGGACTGACCGTGCCGCAGGTCGCGGCGCGCGCCGGGGTCACGC
CTTCGACGATCTATCGACGCTGGAACGACATGGCGACGCTGATAAGCGACGTGGCGCAACGCAATCTGCGCGTGGACTGC
CCGCTGAAACCGAGTGGTCGCCTGTCGGAGGATCTGCCTGCCTGGGCGGAGATGTATCAGGAGGAAATGGACTCGACGCC
CGGCCGTGCGATGATACGGGACGTTCTGCGCGGCTGGGACGGCACGCAGAAAGCGTGCCCCCTGCTCGACGCGGTGCGGC
CGTCGATCGCGTTGATCTGTGAGGCTTCCGGAGAACCGGTGACTTTCGACGTGGAAGCTGTGATTGATGCCGTGGTGGCG
CCGCTTGTGACACGTATCGTTTTCACGGACGCTCCCTTGCCGGCGGCGCTTGCGCGCGATGCGGCGGTCGCCTTCGTCGC
ACGGCATTCCTCGGGCAAATAG

Upstream 100 bases:

>100_bases
AGGACATCATCACGCGCTCCTGTCTAACGCAAAGAATGTGCGTTAGGGTGATAACGATCTGCACGATCAAAAGCAAATTC
TTTGCGTTAAGGGAGAAAAG

Downstream 100 bases:

>100_bases
CAACGGTCCGTCCACTCGGCGATAAGAAGCGGACAGACTGGTGACGCCCTCAACTGCGACATTCGGCAAAATGAGGCCCA
TGTCCGGCTTGGGCCGTCTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transcriptional Regulator TetR

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSELRDPIRSGPRPGGRSLRVQEAVHAAVTALIEEIGREGLTVPQVAARAGVTPSTIYRRWNDMATLISDVAQRNLRVDC
PLKPSGRLSEDLPAWAEMYQEEMDSTPGRAMIRDVLRGWDGTQKACPLLDAVRPSIALICEASGEPVTFDVEAVIDAVVA
PLVTRIVFTDAPLPAALARDAAVAFVARHSSGK

Sequences:

>Translated_193_residues
MSELRDPIRSGPRPGGRSLRVQEAVHAAVTALIEEIGREGLTVPQVAARAGVTPSTIYRRWNDMATLISDVAQRNLRVDC
PLKPSGRLSEDLPAWAEMYQEEMDSTPGRAMIRDVLRGWDGTQKACPLLDAVRPSIALICEASGEPVTFDVEAVIDAVVA
PLVTRIVFTDAPLPAALARDAAVAFVARHSSGK
>Mature_192_residues
SELRDPIRSGPRPGGRSLRVQEAVHAAVTALIEEIGREGLTVPQVAARAGVTPSTIYRRWNDMATLISDVAQRNLRVDCP
LKPSGRLSEDLPAWAEMYQEEMDSTPGRAMIRDVLRGWDGTQKACPLLDAVRPSIALICEASGEPVTFDVEAVIDAVVAP
LVTRIVFTDAPLPAALARDAAVAFVARHSSGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20793; Mature: 20662

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELRDPIRSGPRPGGRSLRVQEAVHAAVTALIEEIGREGLTVPQVAARAGVTPSTIYRR
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHH
WNDMATLISDVAQRNLRVDCPLKPSGRLSEDLPAWAEMYQEEMDSTPGRAMIRDVLRGWD
HHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC
GTQKACPLLDAVRPSIALICEASGEPVTFDVEAVIDAVVAPLVTRIVFTDAPLPAALARD
CCHHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AAVAFVARHSSGK
HHHHHHHHCCCCC
>Mature Secondary Structure 
SELRDPIRSGPRPGGRSLRVQEAVHAAVTALIEEIGREGLTVPQVAARAGVTPSTIYRR
CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHH
WNDMATLISDVAQRNLRVDCPLKPSGRLSEDLPAWAEMYQEEMDSTPGRAMIRDVLRGWD
HHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC
GTQKACPLLDAVRPSIALICEASGEPVTFDVEAVIDAVVAPLVTRIVFTDAPLPAALARD
CCHHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AAVAFVARHSSGK
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA