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The map label for this gene is sdiA [C]

Identifier: 162148611

GI number: 162148611

Start: 2930022

End: 2930741

Strand: Direct

Name: sdiA [C]

Synonym: GDI_2838

Alternate gene names: 162148611

Gene position: 2930022-2930741 (Clockwise)

Preceding gene: 162148610

Following gene: 162148612

Centisome position: 74.29

GC content: 49.72

Gene sequence:

>720_bases
ATGACTAAAACAGTCTCCTTTGATAAGGCGTTTGACTTGATTGAACCCTTACGGCGCTCCACGACCGCATCGGAACTACG
CGCGGCATTTGTCCGTGCGACCAAAAGCATCAGCGATTGTTATATTGCTTCTGGGCGCGTCAAAGGCGGGGCGCCTGTGA
ACGCGGAAACCGCGCTAGTTACGTATCCTGACGCTTGGCTCAAGCACTACCATGAAAGAAAATATCTCGATATTGACCCG
ACTATTGTGAATGCCGGCCGGTCTTACGTCCCCTATAGATGGGAGGCGCTACAGGATATTAGCGTTAAGCAACGGCAGAT
GTTCCTTGACATTGCCGAAACGGGAATCAAGGGCGGCATCACAATGTCATTGCATACCCCCGACAGGGCGGCGTTCGTCA
CAAGCTTTGCATTTACCAAAGCGGTAAGTGAAGATAGGGATCTAGTGGCACTCGGTTTTATAAATAGCCAGTATTATGAA
ACATTGTCGAAGTTAAGCGAGGCAGAATTACCGGGCCCCGTCCCCACATTTTCGCGTCGTGAGAAGGAATGCCTGTTGTG
GGTGTCGCGAGGAAAGACGACTTGGGACATCAGCGTTATACTTGGAATTAGCGAGAACACTATAAACGCGTATCTGAAGA
ATGTCATATTAAAGCTTGGTTGTAGTGGAAGAATCCAAGCGGTACTCCGGGCGATCGACCTCAATTTGATCTCACCGTGA

Upstream 100 bases:

>100_bases
CATGGTCGCCATGCTCATCGATTGCCACCCCACTGACCGGTTCTGGTTATAATGTAACATCATGTAACGAATTAGAAATG
GATATGCTTAGGGTGGACGA

Downstream 100 bases:

>100_bases
GAGGCGCCGCGCATCCTACTATTGACAGTAGGTTATCCATCCGACGGCACTGACGTGCTCCCCGAAAACCCGGCCAATTT
GAGTTGGAATTTTCCACGTA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTKTVSFDKAFDLIEPLRRSTTASELRAAFVRATKSISDCYIASGRVKGGAPVNAETALVTYPDAWLKHYHERKYLDIDP
TIVNAGRSYVPYRWEALQDISVKQRQMFLDIAETGIKGGITMSLHTPDRAAFVTSFAFTKAVSEDRDLVALGFINSQYYE
TLSKLSEAELPGPVPTFSRREKECLLWVSRGKTTWDISVILGISENTINAYLKNVILKLGCSGRIQAVLRAIDLNLISP

Sequences:

>Translated_239_residues
MTKTVSFDKAFDLIEPLRRSTTASELRAAFVRATKSISDCYIASGRVKGGAPVNAETALVTYPDAWLKHYHERKYLDIDP
TIVNAGRSYVPYRWEALQDISVKQRQMFLDIAETGIKGGITMSLHTPDRAAFVTSFAFTKAVSEDRDLVALGFINSQYYE
TLSKLSEAELPGPVPTFSRREKECLLWVSRGKTTWDISVILGISENTINAYLKNVILKLGCSGRIQAVLRAIDLNLISP
>Mature_238_residues
TKTVSFDKAFDLIEPLRRSTTASELRAAFVRATKSISDCYIASGRVKGGAPVNAETALVTYPDAWLKHYHERKYLDIDPT
IVNAGRSYVPYRWEALQDISVKQRQMFLDIAETGIKGGITMSLHTPDRAAFVTSFAFTKAVSEDRDLVALGFINSQYYET
LSKLSEAELPGPVPTFSRREKECLLWVSRGKTTWDISVILGISENTINAYLKNVILKLGCSGRIQAVLRAIDLNLISP

Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=181, Percent_Identity=29.2817679558011, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 26642; Mature: 26511

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTVSFDKAFDLIEPLRRSTTASELRAAFVRATKSISDCYIASGRVKGGAPVNAETALV
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCCCCEEEE
TYPDAWLKHYHERKYLDIDPTIVNAGRSYVPYRWEALQDISVKQRQMFLDIAETGIKGGI
ECCHHHHHHHHCCCEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TMSLHTPDRAAFVTSFAFTKAVSEDRDLVALGFINSQYYETLSKLSEAELPGPVPTFSRR
EEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC
EKECLLWVSRGKTTWDISVILGISENTINAYLKNVILKLGCSGRIQAVLRAIDLNLISP
CCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKTVSFDKAFDLIEPLRRSTTASELRAAFVRATKSISDCYIASGRVKGGAPVNAETALV
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCCCCEEEE
TYPDAWLKHYHERKYLDIDPTIVNAGRSYVPYRWEALQDISVKQRQMFLDIAETGIKGGI
ECCHHHHHHHHCCCEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TMSLHTPDRAAFVTSFAFTKAVSEDRDLVALGFINSQYYETLSKLSEAELPGPVPTFSRR
EEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC
EKECLLWVSRGKTTWDISVILGISENTINAYLKNVILKLGCSGRIQAVLRAIDLNLISP
CCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]