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The map label for this gene is 162148570

Identifier: 162148570

GI number: 162148570

Start: 2880764

End: 2881345

Strand: Reverse

Name: 162148570

Synonym: GDI_2796

Alternate gene names: NA

Gene position: 2881345-2880764 (Counterclockwise)

Preceding gene: 162148571

Following gene: 162148569

Centisome position: 73.05

GC content: 66.32

Gene sequence:

>582_bases
GTGGGCGCCTCGCTGTCGTTTCATCCCACACCGCGCTGGGTCTGGAACGAGACGGCGAGCGTTCCGGTCGGGCTGTATCG
CATCCAGCCCACAGTCCCGGTGCGCGTCGGCGACATTGTCGCCATCCGCCTGCCAGAGCGCGAAGCGACGCTGCTGGCGT
CACGCGGCTACCTGCCGTTCGGCGTGCCGCTGCTCAAGCCTGTGGCAGCACTGGCGGGGCAGAGTGTCTGTCGCATCGGC
GTCCACGTCACCATCGACGGTAAGGCGGTCGGCGACGCGAAGACCGTCGACCATCGGGGCCGCAAGCTGCCCGTCTGGCA
GGGCTGTCAGCATCTCGGGCTGGGGCAGGTTTTCGTCATGAACGCCGCTGTGCCAACCAGTCTGGATGGGCGGTATTTCG
GTGTCCTGCCGATGGATATCGTCATTGGCCGTGCGGTGCCGGTTCATGTCCGGACTGGTGAAGCCGAGCCACCACCGCCG
CATTTCGCTCCCTTTCCGGAACCGCCCGAGCCGATGCGGGAGCGACCGCTTCTGGCGCCGCCCATGATGCCCATGAAATC
CGGTGAACCACCCATCCAATGA

Upstream 100 bases:

>100_bases
GTCCCTATACGCGTGAACGCCACGAGGCGTGGCTGCGCAGGAGGGTCGCGTCATGACCCGTCGCGCCTGGTTTTTTACCA
CTTATCTCGCCGTGCTCGGT

Downstream 100 bases:

>100_bases
TGGTCGCCAGCCATTGAATTTTCATACACCCGAAAGGACTTCTCTCATGAGCCAGATCGGTTTTTTCACCCGGACGTCGG
ATGGTTTCGCCGGACGGGTG

Product: conjugal transfer protein

Products: NA

Alternate protein names: Conjugal Transfer Protein TraF; TraF Peptidase; Conjugal Transfer TRAF Transmembrane Protein; Type IV Secretory Pathway Protease TraF-Like Protein; Peptidase; Plasmid Transfer Protein TraF; Type IV Secretory Pathway Protease TraF; Conjugative Transfer Signal Peptidase TraF; Peptidase S; Raf Peptidase. Serine Peptidase. Merops Family; Conjugal Transfer Protein Traf; Conjugal Transfer TraF Transmembrane Protein; Plasmid Transfer Protein Traf; Traf Peptidase Serine Peptidase Merops Family; Transmembrane Anchor Conjugal Transfer Protein; RaF Peptidase. Serine Peptidase. MEROPS Family; TraF Peptidase Serine Peptidase MEROPS Family

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MGASLSFHPTPRWVWNETASVPVGLYRIQPTVPVRVGDIVAIRLPEREATLLASRGYLPFGVPLLKPVAALAGQSVCRIG
VHVTIDGKAVGDAKTVDHRGRKLPVWQGCQHLGLGQVFVMNAAVPTSLDGRYFGVLPMDIVIGRAVPVHVRTGEAEPPPP
HFAPFPEPPEPMRERPLLAPPMMPMKSGEPPIQ

Sequences:

>Translated_193_residues
MGASLSFHPTPRWVWNETASVPVGLYRIQPTVPVRVGDIVAIRLPEREATLLASRGYLPFGVPLLKPVAALAGQSVCRIG
VHVTIDGKAVGDAKTVDHRGRKLPVWQGCQHLGLGQVFVMNAAVPTSLDGRYFGVLPMDIVIGRAVPVHVRTGEAEPPPP
HFAPFPEPPEPMRERPLLAPPMMPMKSGEPPIQ
>Mature_192_residues
GASLSFHPTPRWVWNETASVPVGLYRIQPTVPVRVGDIVAIRLPEREATLLASRGYLPFGVPLLKPVAALAGQSVCRIGV
HVTIDGKAVGDAKTVDHRGRKLPVWQGCQHLGLGQVFVMNAAVPTSLDGRYFGVLPMDIVIGRAVPVHVRTGEAEPPPPH
FAPFPEPPEPMRERPLLAPPMMPMKSGEPPIQ

Specific function: Unknown

COG id: COG4959

COG function: function code OU; Type IV secretory pathway, protease TraF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20872; Mature: 20741

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGASLSFHPTPRWVWNETASVPVGLYRIQPTVPVRVGDIVAIRLPEREATLLASRGYLPF
CCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEECCEEEEEECCCCEEEEEECCCCCC
GVPLLKPVAALAGQSVCRIGVHVTIDGKAVGDAKTVDHRGRKLPVWQGCQHLGLGQVFVM
CCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCHHHCCCCEEEEE
NAAVPTSLDGRYFGVLPMDIVIGRAVPVHVRTGEAEPPPPHFAPFPEPPEPMRERPLLAP
ECCCCCCCCCEEEEEECHHHEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCC
PMMPMKSGEPPIQ
CCCCCCCCCCCCC
>Mature Secondary Structure 
GASLSFHPTPRWVWNETASVPVGLYRIQPTVPVRVGDIVAIRLPEREATLLASRGYLPF
CCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEECCEEEEEECCCCEEEEEECCCCCC
GVPLLKPVAALAGQSVCRIGVHVTIDGKAVGDAKTVDHRGRKLPVWQGCQHLGLGQVFVM
CCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCHHHCCCCEEEEE
NAAVPTSLDGRYFGVLPMDIVIGRAVPVHVRTGEAEPPPPHFAPFPEPPEPMRERPLLAP
ECCCCCCCCCEEEEEECHHHEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCC
PMMPMKSGEPPIQ
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA