| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is ykvO [H]
Identifier: 162148563
GI number: 162148563
Start: 2873531
End: 2874265
Strand: Reverse
Name: ykvO [H]
Synonym: GDI_2787
Alternate gene names: 162148563
Gene position: 2874265-2873531 (Counterclockwise)
Preceding gene: 162148568
Following gene: 162148562
Centisome position: 72.87
GC content: 60.95
Gene sequence:
>735_bases ATGGGAAAGCTTGAGGGCAAGGTTGCCGTCATCACAGGTGGATCGAGCGGCATGGCGCTGGCGAGCGCCCGGCGGTTCGT TGAAGAAGGCGCCTATGTGTTCATCACCGGACGACGACAGGAGACGCTGGACGAGGCCGTCAAGCTAATTGGCCGGAACG TGACCGGCGTACGCGGTGACGCGGCCAACCTCGACGACCTCGACCGTCTGTTCGATACGGTCAAGCGGGAAAAGGGCAGG ATCGACGTCCTGTATGCGAGCGCGGGCACCGGCGAAGCGGCCCTACTGGGCGAGATTACCGAGCAGCATTTCGATGCGAC CTTCAATCTAAATGCACGCGGTACGCTGTTCACGGTCCAGAAGGCGTTACCGCTGTTCAACGATGGCGGGTCGATCTTCA TGACCGGATCGGTTGCCTCGATCAAAGGTTTTCCCGGTTACAGCGTGTACGCGGCGAGCAAGGCGACGCTGCATGCCTTC GCACGTGGGTGGCTCAACGAACTGAAGGACCGGAACATCCGGGTGAACGTGCTGCACCCGGGGCCGATCGCCACACCGAT GCAGGACCAGGTTCTCACCGCGGAAGCAAAGCAGATGTTCGAATCCCTGATCCCGCGGGGAACGATGGGTCGTCCCGAGG AAATCGCGGCAGCCGCGCTGTTTCTTGCTTCAGACGATTCCAGTTTCGTGAACGGAATGGAACTCTGTGTCGACGGCGGC TTCTCGGCCATCTGA
Upstream 100 bases:
>100_bases GTGCGCACTTTCGCACTCAACGCCTGCCCTCGGCCGGCCCATGTTGAGACCATCGGGAACCTCCCCGAACGATCAAAGAT GAAGTCTGAAGGGAAAAATC
Downstream 100 bases:
>100_bases ACCCACTATCGGAGGACGGGACGCGTTCGTTGCTGAACATTTCCCGCTCTCTGCGATATCGCCGTGAATAAAGATTGGAA ACACGCCAATGAGCTACGCA
Product: dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MGKLEGKVAVITGGSSGMALASARRFVEEGAYVFITGRRQETLDEAVKLIGRNVTGVRGDAANLDDLDRLFDTVKREKGR IDVLYASAGTGEAALLGEITEQHFDATFNLNARGTLFTVQKALPLFNDGGSIFMTGSVASIKGFPGYSVYAASKATLHAF ARGWLNELKDRNIRVNVLHPGPIATPMQDQVLTAEAKQMFESLIPRGTMGRPEEIAAAALFLASDDSSFVNGMELCVDGG FSAI
Sequences:
>Translated_244_residues MGKLEGKVAVITGGSSGMALASARRFVEEGAYVFITGRRQETLDEAVKLIGRNVTGVRGDAANLDDLDRLFDTVKREKGR IDVLYASAGTGEAALLGEITEQHFDATFNLNARGTLFTVQKALPLFNDGGSIFMTGSVASIKGFPGYSVYAASKATLHAF ARGWLNELKDRNIRVNVLHPGPIATPMQDQVLTAEAKQMFESLIPRGTMGRPEEIAAAALFLASDDSSFVNGMELCVDGG FSAI >Mature_243_residues GKLEGKVAVITGGSSGMALASARRFVEEGAYVFITGRRQETLDEAVKLIGRNVTGVRGDAANLDDLDRLFDTVKREKGRI DVLYASAGTGEAALLGEITEQHFDATFNLNARGTLFTVQKALPLFNDGGSIFMTGSVASIKGFPGYSVYAASKATLHAFA RGWLNELKDRNIRVNVLHPGPIATPMQDQVLTAEAKQMFESLIPRGTMGRPEEIAAAALFLASDDSSFVNGMELCVDGGF SAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=32.6530612244898, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=31.0483870967742, Blast_Score=116, Evalue=1e-26, Organism=Homo sapiens, GI40254992, Length=240, Percent_Identity=30.4166666666667, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=30.4878048780488, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=30.8, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=31.8681318681319, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=30.4347826086957, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=31.413612565445, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=26.3779527559055, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=28.6290322580645, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=30.4878048780488, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI59889578, Length=224, Percent_Identity=30.3571428571429, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI4758504, Length=251, Percent_Identity=27.8884462151394, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=34.7826086956522, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=29.2682926829268, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=33.739837398374, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=29.3650793650794, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1787335, Length=242, Percent_Identity=29.7520661157025, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=30, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=29.7959183673469, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1787905, Length=243, Percent_Identity=30.8641975308642, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=27.1255060728745, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=29.7959183673469, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786701, Length=219, Percent_Identity=30.5936073059361, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=27.7551020408163, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787820, Length=179, Percent_Identity=27.3743016759777, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787545, Length=259, Percent_Identity=23.1660231660232, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787526, Length=240, Percent_Identity=26.25, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=33.201581027668, Blast_Score=126, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17559104, Length=270, Percent_Identity=33.7037037037037, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=33.5849056603774, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=32.0754716981132, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=28.6852589641434, Blast_Score=103, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=30.5019305019305, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=31.0204081632653, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=30.9917355371901, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=33.457249070632, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=33.4586466165414, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17538480, Length=266, Percent_Identity=32.7067669172932, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI115534694, Length=244, Percent_Identity=32.3770491803279, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=31.0606060606061, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=32.319391634981, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17563726, Length=272, Percent_Identity=30.8823529411765, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=31.0861423220974, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=29.4339622641509, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI72000259, Length=264, Percent_Identity=31.0606060606061, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=30.188679245283, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=31.5589353612167, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=30.6513409961686, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=28.968253968254, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=28.9473684210526, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=27.2727272727273, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=28.7449392712551, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=26.4591439688716, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17538182, Length=252, Percent_Identity=26.984126984127, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17561272, Length=255, Percent_Identity=27.843137254902, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322067, Length=188, Percent_Identity=28.1914893617021, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323882, Length=194, Percent_Identity=28.3505154639175, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=28.2258064516129, Blast_Score=72, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6322227, Length=231, Percent_Identity=25.974025974026, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=31.4741035856574, Blast_Score=124, Evalue=5e-29, Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=34.5381526104418, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=33.4645669291339, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=31.496062992126, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=30.4166666666667, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI23397609, Length=247, Percent_Identity=32.7935222672065, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=31.1740890688259, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24644337, Length=245, Percent_Identity=32.6530612244898, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI17737361, Length=253, Percent_Identity=27.6679841897233, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI281364494, Length=204, Percent_Identity=27.9411764705882, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24580925, Length=206, Percent_Identity=27.1844660194175, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI21356301, Length=193, Percent_Identity=27.4611398963731, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26053; Mature: 25922
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLEGKVAVITGGSSGMALASARRFVEEGAYVFITGRRQETLDEAVKLIGRNVTGVRGD CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCC AANLDDLDRLFDTVKREKGRIDVLYASAGTGEAALLGEITEQHFDATFNLNARGTLFTVQ CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCEEEEEE KALPLFNDGGSIFMTGSVASIKGFPGYSVYAASKATLHAFARGWLNELKDRNIRVNVLHP CCCCEECCCCCEEEECCEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECC GPIATPMQDQVLTAEAKQMFESLIPRGTMGRPEEIAAAALFLASDDSSFVNGMELCVDGG CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCHHHHHHHHEECCC FSAI CCCC >Mature Secondary Structure GKLEGKVAVITGGSSGMALASARRFVEEGAYVFITGRRQETLDEAVKLIGRNVTGVRGD CCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCC AANLDDLDRLFDTVKREKGRIDVLYASAGTGEAALLGEITEQHFDATFNLNARGTLFTVQ CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCEEEEEE KALPLFNDGGSIFMTGSVASIKGFPGYSVYAASKATLHAFARGWLNELKDRNIRVNVLHP CCCCEECCCCCEEEECCEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECC GPIATPMQDQVLTAEAKQMFESLIPRGTMGRPEEIAAAALFLASDDSSFVNGMELCVDGG CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCHHHHHHHHEECCC FSAI CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]