| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162148556
Identifier: 162148556
GI number: 162148556
Start: 2864549
End: 2865745
Strand: Reverse
Name: 162148556
Synonym: GDI_2780
Alternate gene names: NA
Gene position: 2865745-2864549 (Counterclockwise)
Preceding gene: 162148559
Following gene: 162148555
Centisome position: 72.66
GC content: 64.08
Gene sequence:
>1197_bases ATGACCGACGAGAAGATGGCGCTGCTGGAGCTTGTGGAGCAAGCGTCGGATGGCGATTTTGTTCGTGAGATGCTGGCGTT CGCTGCCGATCGGATGATGGAGATGGAGGTTGAGGCCCGGACCGGTGCGCCGCTTGGCGCGCGTTCGGCCTCCCGCTCGA CCCAACGCAACGGCTACCGCGCTCGGAACTGGGACACCCGGGCGGGCACGGTGGAGCTTGCGATCCCGAAGCTACGCAAG GGCAGCTATTTCCCGACCTTCCTGGAGCCGCGGAAAACGGCGGAAAAGGCACTGCTGGCGGTCATCCAGGAAGCCTACGT CCAGGGTATTTCCACGCGATCGGTCGATGATCTCGTCCGCGCGATGGGCGCCGGGGGCATCTCCAAAAGCCAGGTCAGTC GTCTGGTGGGCGAGATCGACGAACGGGTCAACAGCTTCCTGTCTCGGCCGATCGAGGGCGAATGGCCGTATCTCTGGATC GACGCCACCTATCTGAAACTGCGCCAGGGTGGCCGGATTGTCTCGATTGCCGTGATAATCGCCGTGGGCGTAAATACGGA CGGCCGTCGTGAGGTGCTCGGCGTGGCGACGGGACCGTCCGAAGCGGAAGCGTTCTGGACGGATTTCCTGCGCTCCCTGG CCGATCGCGGCCTGCGCGGCGTGAAGTTGGTGGTGGCCGACGCGCATGCCGGACTGCGGGCCGCGGCCGGTCGCGTGTTC AATGCGACCCTGCAACGCTGCCGGGTGCACTGGCTGCGCAATGCGCTCGCCCATGCCCATGCGAAGCAGCGTCCTGCCAT CTCGGCCCTGTTGCGCACGATCTTCACGCAGGAAACCGCCGAGGATGCGTCACGCCAATGGCGGCACGTCACCGACAAGC TGCGCGAAGGCTTTCCGAAGCTGGCCGAATTCATGAAGCGGACGGAAGTGGACGTGCTTGCCTACATGGGCTTTCCTCGG GAGCATTGGACGCAAATCTCGTCGACGAACCCGATCGAGCGGGTGAACAGGGAGATCAAGCGTCGCTGCGACGTCATCGG CATTTTCCCCAACGATGCCGCCATTATCCGCCTCGTCGGCGCGCTGATGCTCGAACAGAACGACGAGTGGGCGGTCTGCC GACGTTACATGACGCTGGAAGGACTGGCCGCCATCAGCCATAATCCCACAATCAGCCTGCCCGCCGTGGCCGCCTGA
Upstream 100 bases:
>100_bases GTGTCCCGAGGTGTGGTGTAGGAGCGAGTCTGGCTGCTGAGGCGGCCATCGCCGGTCTTTGATAGGGTTCGGGTGCGAAC TGAACCTGAAGGACCTGACG
Downstream 100 bases:
>100_bases TAACCTCGAACCCTTCGAGGAACGGTGCTCCTACACCACACCTCGGGACACAGCCCCACGCTGCTGTCCGTTCAAGATGC CCGATTTCAAGTTGCGCCAT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTDEKMALLELVEQASDGDFVREMLAFAADRMMEMEVEARTGAPLGARSASRSTQRNGYRARNWDTRAGTVELAIPKLRK GSYFPTFLEPRKTAEKALLAVIQEAYVQGISTRSVDDLVRAMGAGGISKSQVSRLVGEIDERVNSFLSRPIEGEWPYLWI DATYLKLRQGGRIVSIAVIIAVGVNTDGRREVLGVATGPSEAEAFWTDFLRSLADRGLRGVKLVVADAHAGLRAAAGRVF NATLQRCRVHWLRNALAHAHAKQRPAISALLRTIFTQETAEDASRQWRHVTDKLREGFPKLAEFMKRTEVDVLAYMGFPR EHWTQISSTNPIERVNREIKRRCDVIGIFPNDAAIIRLVGALMLEQNDEWAVCRRYMTLEGLAAISHNPTISLPAVAA
Sequences:
>Translated_398_residues MTDEKMALLELVEQASDGDFVREMLAFAADRMMEMEVEARTGAPLGARSASRSTQRNGYRARNWDTRAGTVELAIPKLRK GSYFPTFLEPRKTAEKALLAVIQEAYVQGISTRSVDDLVRAMGAGGISKSQVSRLVGEIDERVNSFLSRPIEGEWPYLWI DATYLKLRQGGRIVSIAVIIAVGVNTDGRREVLGVATGPSEAEAFWTDFLRSLADRGLRGVKLVVADAHAGLRAAAGRVF NATLQRCRVHWLRNALAHAHAKQRPAISALLRTIFTQETAEDASRQWRHVTDKLREGFPKLAEFMKRTEVDVLAYMGFPR EHWTQISSTNPIERVNREIKRRCDVIGIFPNDAAIIRLVGALMLEQNDEWAVCRRYMTLEGLAAISHNPTISLPAVAA >Mature_397_residues TDEKMALLELVEQASDGDFVREMLAFAADRMMEMEVEARTGAPLGARSASRSTQRNGYRARNWDTRAGTVELAIPKLRKG SYFPTFLEPRKTAEKALLAVIQEAYVQGISTRSVDDLVRAMGAGGISKSQVSRLVGEIDERVNSFLSRPIEGEWPYLWID ATYLKLRQGGRIVSIAVIIAVGVNTDGRREVLGVATGPSEAEAFWTDFLRSLADRGLRGVKLVVADAHAGLRAAAGRVFN ATLQRCRVHWLRNALAHAHAKQRPAISALLRTIFTQETAEDASRQWRHVTDKLREGFPKLAEFMKRTEVDVLAYMGFPRE HWTQISSTNPIERVNREIKRRCDVIGIFPNDAAIIRLVGALMLEQNDEWAVCRRYMTLEGLAAISHNPTISLPAVAA
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 44341; Mature: 44210
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEKMALLELVEQASDGDFVREMLAFAADRMMEMEVEARTGAPLGARSASRSTQRNGYR CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC ARNWDTRAGTVELAIPKLRKGSYFPTFLEPRKTAEKALLAVIQEAYVQGISTRSVDDLVR CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AMGAGGISKSQVSRLVGEIDERVNSFLSRPIEGEWPYLWIDATYLKLRQGGRIVSIAVII HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEEEE AVGVNTDGRREVLGVATGPSEAEAFWTDFLRSLADRGLRGVKLVVADAHAGLRAAAGRVF EECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH NATLQRCRVHWLRNALAHAHAKQRPAISALLRTIFTQETAEDASRQWRHVTDKLREGFPK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LAEFMKRTEVDVLAYMGFPREHWTQISSTNPIERVNREIKRRCDVIGIFPNDAAIIRLVG HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHH ALMLEQNDEWAVCRRYMTLEGLAAISHNPTISLPAVAA HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TDEKMALLELVEQASDGDFVREMLAFAADRMMEMEVEARTGAPLGARSASRSTQRNGYR CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC ARNWDTRAGTVELAIPKLRKGSYFPTFLEPRKTAEKALLAVIQEAYVQGISTRSVDDLVR CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AMGAGGISKSQVSRLVGEIDERVNSFLSRPIEGEWPYLWIDATYLKLRQGGRIVSIAVII HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEEEE AVGVNTDGRREVLGVATGPSEAEAFWTDFLRSLADRGLRGVKLVVADAHAGLRAAAGRVF EECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH NATLQRCRVHWLRNALAHAHAKQRPAISALLRTIFTQETAEDASRQWRHVTDKLREGFPK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LAEFMKRTEVDVLAYMGFPREHWTQISSTNPIERVNREIKRRCDVIGIFPNDAAIIRLVG HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHH ALMLEQNDEWAVCRRYMTLEGLAAISHNPTISLPAVAA HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1663885; 12788972 [H]