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The map label for this gene is 162148537

Identifier: 162148537

GI number: 162148537

Start: 2852317

End: 2852880

Strand: Reverse

Name: 162148537

Synonym: GDI_2761

Alternate gene names: NA

Gene position: 2852880-2852317 (Counterclockwise)

Preceding gene: 162148538

Following gene: 162148536

Centisome position: 72.33

GC content: 64.72

Gene sequence:

>564_bases
ATGATCGGCAGTGGCTGGCAGATCTATAATGCCTCGCCCATTCTGCCTTTCGAATTCCCGGCCTGGGCCACATTGGGTGG
CTGGCTGGGCGGCGGGATCGCCTGGCATTTCGCGGCGATGTGGGTGCTGATGGCTGCCGGCGTCGTTTACATGGGGTATG
GCGTGCTGTCGGGGCATTTCCGCCGCGATCTGCGGCCCGTCGGCCCACGCGCGGTCCGACGTGATATGGCGCGGGCGCTG
CGCTTCAGGCTGTCCCATGCCGCCGGTCATTACAACGCTGTCCAGCGGCTGCTTTATACCGGCGTGCTGATTGTCGCCCT
GCTGACCGTTGCAAGCGGGCTGTCCATCTGGAAGCCGGTGCAGCTTGGATGGCTGACATGGCTGTTCGGCGGTTACGATG
TCGCCCGCCGCATTCATTTCGCGATGATGACGCTGATCGTCGCCTTTCTCGTCATTCACATCGCGCTCGCCCTGCTCGTG
CCGTCGACCCTGTTCGGCATGGTGTTCGGCCGTCGTCCGAGCGTGGCGCCGGAAGCGAGCGTCCAGGAGGGGGCTGCCCG
ATGA

Upstream 100 bases:

>100_bases
AAGCCCGGACATGTTCTCATCACGCAGCGTGCGGCCGCGTCGCACGCCATCGCCCGTTATTCGAATCACCCACTGGATCG
GCGCATTGTCGATGCTCGTC

Downstream 100 bases:

>100_bases
GTCACAACCGCCTCGATCGCTCGGCGATCGCCCCCGAACTGCGCCGGATCGAGCGCCGTCTGATGCTCAAAGGCGCCCTG
TCGCTCGGTGGACTGTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Thiosulfate Reductase Cytochrome B Subunit; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Transmembrane B-Type Cytochrome Protein; Thiosulfate Reductase Cytochrome Subunit B; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Thiosulfate Reductase Cytochrome Subunit B-Like Protein; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Cytochrome; Conserved Protein; Transmembrane Cytochrome B-Type Protein; Transmembrane Hydrogenase Cytochrome

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MIGSGWQIYNASPILPFEFPAWATLGGWLGGGIAWHFAAMWVLMAAGVVYMGYGVLSGHFRRDLRPVGPRAVRRDMARAL
RFRLSHAAGHYNAVQRLLYTGVLIVALLTVASGLSIWKPVQLGWLTWLFGGYDVARRIHFAMMTLIVAFLVIHIALALLV
PSTLFGMVFGRRPSVAPEASVQEGAAR

Sequences:

>Translated_187_residues
MIGSGWQIYNASPILPFEFPAWATLGGWLGGGIAWHFAAMWVLMAAGVVYMGYGVLSGHFRRDLRPVGPRAVRRDMARAL
RFRLSHAAGHYNAVQRLLYTGVLIVALLTVASGLSIWKPVQLGWLTWLFGGYDVARRIHFAMMTLIVAFLVIHIALALLV
PSTLFGMVFGRRPSVAPEASVQEGAAR
>Mature_187_residues
MIGSGWQIYNASPILPFEFPAWATLGGWLGGGIAWHFAAMWVLMAAGVVYMGYGVLSGHFRRDLRPVGPRAVRRDMARAL
RFRLSHAAGHYNAVQRLLYTGVLIVALLTVASGLSIWKPVQLGWLTWLFGGYDVARRIHFAMMTLIVAFLVIHIALALLV
PSTLFGMVFGRRPSVAPEASVQEGAAR

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20534; Mature: 20534

Theoretical pI: Translated: 11.74; Mature: 11.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGSGWQIYNASPILPFEFPAWATLGGWLGGGIAWHFAAMWVLMAAGVVYMGYGVLSGHF
CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDLRPVGPRAVRRDMARALRFRLSHAAGHYNAVQRLLYTGVLIVALLTVASGLSIWKPV
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QLGWLTWLFGGYDVARRIHFAMMTLIVAFLVIHIALALLVPSTLFGMVFGRRPSVAPEAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
VQEGAAR
HHCCCCC
>Mature Secondary Structure
MIGSGWQIYNASPILPFEFPAWATLGGWLGGGIAWHFAAMWVLMAAGVVYMGYGVLSGHF
CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDLRPVGPRAVRRDMARALRFRLSHAAGHYNAVQRLLYTGVLIVALLTVASGLSIWKPV
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QLGWLTWLFGGYDVARRIHFAMMTLIVAFLVIHIALALLVPSTLFGMVFGRRPSVAPEAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
VQEGAAR
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA