| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is dht [C]
Identifier: 162148496
GI number: 162148496
Start: 2813653
End: 2815047
Strand: Direct
Name: dht [C]
Synonym: GDI_2717
Alternate gene names: 162148496
Gene position: 2813653-2815047 (Clockwise)
Preceding gene: 162148495
Following gene: 162148500
Centisome position: 71.34
GC content: 62.8
Gene sequence:
>1395_bases ATGACCTTCGACATCGTCATCCGCAACGGCACCATCGTGACCGCCAGCGACGTGTTTACCGCCGATATCGGCATTACCGG CGAAACGATCGACACGATCGGGCACGGTCTGACCGGCCACCATGTCGTGGACGCCACCGGGCTGCTGGTCATGCCGGGCG GCATCGACGGTCATTGCCATATCGAGCAGGAAGAGGCCGACGGCACGGTGCATGAGGACGATTTCGCTTCGGCAAGCGCG TCCGCACTGCTGGGCGGCACGACGACGGTGGTGTGTTTCGCGTCCCATGTGCCCGGACGCAACATCGTCACACAGTTCGA GGATTATCTCCGGCGGGGGCAGAATTCGCGCATCGATTTCGCCGTCCACCAGATCGTCACGCGTACCGACGCGGATACGA TCGAAAAGGGTATTCCCGAAATCGCCCGCCGGGGCGTGGCGGGGCTGAAGGTCTTCATGACCTACGACGATTTCCATCTG ACGGACGGACAGTTCCTACGCGTTCTCGACGCGGCGAAGGCCAGCGGCCTCGTGGTTTCGGTCCATTGCGAAAATTACGA CGCGATCCGCCACATGATCGAAGCCCATCTCGCCGCCGGACGAACCGACGCCCACGCCCACGCCACCTCCCGCCCCCCCT GCCTGGAACGCGAGGCCACCTATCGCGCCATGACCCTGGCCGAACTCGTCGACCACGACATCCAGATCTTCCATGTTTCA TGCCCGGAAGTCGCCGAGGAAATCGCGCGCGCCCGTCACCGCGGCGTCAAGGTCTCCGCGGAAACCTGCCCGCATTATCT TTCCCTCACGGAAGCCGATCTGAAGCGGAACGGATTCGAGGGCGCAAAATATATCTGCAGCCCCCCTCTGCGCACCCAGG CCGACCAGGACGGCATGTGGTCGTATCTGCGCGATGGAGTGATCGGCATCGTATCGTCCGATCATTGCGGCTACAGCTTG GAAGGAACGTCCGGCAAAGCACGCCATGGCCGCGACGCGGATTTTTCACTGATCCCCAACGGGATGCCCGGGCTGGGAAC CAGAATGGCCGTCCTGTTCGATGCCGGTGTAAACAGCCAGAAGATCGGCCTGACGGATTTCGTCCGCCTGACGGCCACCG CACCGGCCCAGCGATATGGCCTTTATCCCCGCAAGGGCACGATCGCCCCGGGCAGCGACGCGGACCTGGTCCTCTGGGAC CGGACACAGCAGGTCAGGATCACCAATGACCTGTTCCAAAGCAGGATCGACTACACACCATTCGAGGGACGCCTCGTCAC CGGTTGGCCCGCCATGGTGCTTGCACGCGGCAGGATAGCCGTCGAGAACGGCCAGGTACTCCGCAAACCCACGATGGGCC GTTTCCTTAAAGCCCGTTCGGGACCGCAGGATTGA
Upstream 100 bases:
>100_bases CCATGCTGACCCACCTGCGCAACGTTGCGACAGACTGCATGGACATCCTTCGCGGCGGCTAGCGCTCTGCCCCGACCTTT CCCACGCCAGGAATCTTCCA
Downstream 100 bases:
>100_bases ACATGCCTGCCGCCCCTGCCCCAATGTGCCCTGGGTTCCGAATTAAGGTTACGGCTTGCTCCCGAAGGTCGAACCGCCGA ATGGTAGAGTTTCCGACCTG
Product: dihydropyrimidinase
Products: 3-ureidopropanoate
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MTFDIVIRNGTIVTASDVFTADIGITGETIDTIGHGLTGHHVVDATGLLVMPGGIDGHCHIEQEEADGTVHEDDFASASA SALLGGTTTVVCFASHVPGRNIVTQFEDYLRRGQNSRIDFAVHQIVTRTDADTIEKGIPEIARRGVAGLKVFMTYDDFHL TDGQFLRVLDAAKASGLVVSVHCENYDAIRHMIEAHLAAGRTDAHAHATSRPPCLEREATYRAMTLAELVDHDIQIFHVS CPEVAEEIARARHRGVKVSAETCPHYLSLTEADLKRNGFEGAKYICSPPLRTQADQDGMWSYLRDGVIGIVSSDHCGYSL EGTSGKARHGRDADFSLIPNGMPGLGTRMAVLFDAGVNSQKIGLTDFVRLTATAPAQRYGLYPRKGTIAPGSDADLVLWD RTQQVRITNDLFQSRIDYTPFEGRLVTGWPAMVLARGRIAVENGQVLRKPTMGRFLKARSGPQD
Sequences:
>Translated_464_residues MTFDIVIRNGTIVTASDVFTADIGITGETIDTIGHGLTGHHVVDATGLLVMPGGIDGHCHIEQEEADGTVHEDDFASASA SALLGGTTTVVCFASHVPGRNIVTQFEDYLRRGQNSRIDFAVHQIVTRTDADTIEKGIPEIARRGVAGLKVFMTYDDFHL TDGQFLRVLDAAKASGLVVSVHCENYDAIRHMIEAHLAAGRTDAHAHATSRPPCLEREATYRAMTLAELVDHDIQIFHVS CPEVAEEIARARHRGVKVSAETCPHYLSLTEADLKRNGFEGAKYICSPPLRTQADQDGMWSYLRDGVIGIVSSDHCGYSL EGTSGKARHGRDADFSLIPNGMPGLGTRMAVLFDAGVNSQKIGLTDFVRLTATAPAQRYGLYPRKGTIAPGSDADLVLWD RTQQVRITNDLFQSRIDYTPFEGRLVTGWPAMVLARGRIAVENGQVLRKPTMGRFLKARSGPQD >Mature_463_residues TFDIVIRNGTIVTASDVFTADIGITGETIDTIGHGLTGHHVVDATGLLVMPGGIDGHCHIEQEEADGTVHEDDFASASAS ALLGGTTTVVCFASHVPGRNIVTQFEDYLRRGQNSRIDFAVHQIVTRTDADTIEKGIPEIARRGVAGLKVFMTYDDFHLT DGQFLRVLDAAKASGLVVSVHCENYDAIRHMIEAHLAAGRTDAHAHATSRPPCLEREATYRAMTLAELVDHDIQIFHVSC PEVAEEIARARHRGVKVSAETCPHYLSLTEADLKRNGFEGAKYICSPPLRTQADQDGMWSYLRDGVIGIVSSDHCGYSLE GTSGKARHGRDADFSLIPNGMPGLGTRMAVLFDAGVNSQKIGLTDFVRLTATAPAQRYGLYPRKGTIAPGSDADLVLWDR TQQVRITNDLFQSRIDYTPFEGRLVTGWPAMVLARGRIAVENGQVLRKPTMGRFLKARSGPQD
Specific function: Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin. Has no activity on dihydropyrimidines [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503051, Length=473, Percent_Identity=33.1923890063425, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI62422571, Length=473, Percent_Identity=33.1923890063425, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI190194363, Length=472, Percent_Identity=31.1440677966102, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI4503377, Length=478, Percent_Identity=33.0543933054393, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI4503375, Length=464, Percent_Identity=32.5431034482759, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI4503379, Length=460, Percent_Identity=31.5217391304348, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI19923821, Length=467, Percent_Identity=32.3340471092077, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI18105007, Length=422, Percent_Identity=27.0142180094787, Blast_Score=108, Evalue=9e-24, Organism=Escherichia coli, GI87082175, Length=465, Percent_Identity=34.4086021505376, Blast_Score=241, Evalue=9e-65, Organism=Escherichia coli, GI1786722, Length=470, Percent_Identity=31.2765957446809, Blast_Score=198, Evalue=7e-52, Organism=Caenorhabditis elegans, GI17539558, Length=464, Percent_Identity=32.3275862068966, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71989490, Length=468, Percent_Identity=30.7692307692308, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI86575075, Length=461, Percent_Identity=27.765726681128, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI193204318, Length=462, Percent_Identity=24.2424242424242, Blast_Score=106, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6322218, Length=476, Percent_Identity=24.7899159663866, Blast_Score=124, Evalue=4e-29, Organism=Drosophila melanogaster, GI221377917, Length=465, Percent_Identity=32.0430107526882, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI17137462, Length=463, Percent_Identity=31.317494600432, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI24642586, Length=426, Percent_Identity=27.6995305164319, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI24644287, Length=298, Percent_Identity=31.2080536912752, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI24644289, Length=234, Percent_Identity=30.7692307692308, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI18859883, Length=256, Percent_Identity=28.515625, Blast_Score=96, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: 3.5.2.2
Molecular weight: Translated: 50491; Mature: 50359
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDIVIRNGTIVTASDVFTADIGITGETIDTIGHGLTGHHVVDATGLLVMPGGIDGHCH CEEEEEEECCEEEEECCEEEEECCCCCCHHHHHCCCCCCCEEEECCCEEEECCCCCCEEE IEQEEADGTVHEDDFASASASALLGGTTTVVCFASHVPGRNIVTQFEDYLRRGQNSRIDF EEHHCCCCCCCCCHHCCCCCHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHH AVHQIVTRTDADTIEKGIPEIARRGVAGLKVFMTYDDFHLTDGQFLRVLDAAKASGLVVS HHHHHHHHCCHHHHHHCCHHHHHCCCCEEEEEEEECCEECCCCHHHHHHHHHCCCCEEEE VHCENYDAIRHMIEAHLAAGRTDAHAHATSRPPCLEREATYRAMTLAELVDHDIQIFHVS EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC CPEVAEEIARARHRGVKVSAETCPHYLSLTEADLKRNGFEGAKYICSPPLRTQADQDGMW CHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHH SYLRDGVIGIVSSDHCGYSLEGTSGKARHGRDADFSLIPNGMPGLGTRMAVLFDAGVNSQ HHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCC KIGLTDFVRLTATAPAQRYGLYPRKGTIAPGSDADLVLWDRTQQVRITNDLFQSRIDYTP CCCHHHHEEEEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEHHHHHHHHCCCCC FEGRLVTGWPAMVLARGRIAVENGQVLRKPTMGRFLKARSGPQD CCCEEEECCHHHHHCCCEEEEECCCEEECCCHHHHHHCCCCCCC >Mature Secondary Structure TFDIVIRNGTIVTASDVFTADIGITGETIDTIGHGLTGHHVVDATGLLVMPGGIDGHCH EEEEEEECCEEEEECCEEEEECCCCCCHHHHHCCCCCCCEEEECCCEEEECCCCCCEEE IEQEEADGTVHEDDFASASASALLGGTTTVVCFASHVPGRNIVTQFEDYLRRGQNSRIDF EEHHCCCCCCCCCHHCCCCCHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHH AVHQIVTRTDADTIEKGIPEIARRGVAGLKVFMTYDDFHLTDGQFLRVLDAAKASGLVVS HHHHHHHHCCHHHHHHCCHHHHHCCCCEEEEEEEECCEECCCCHHHHHHHHHCCCCEEEE VHCENYDAIRHMIEAHLAAGRTDAHAHATSRPPCLEREATYRAMTLAELVDHDIQIFHVS EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC CPEVAEEIARARHRGVKVSAETCPHYLSLTEADLKRNGFEGAKYICSPPLRTQADQDGMW CHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHH SYLRDGVIGIVSSDHCGYSLEGTSGKARHGRDADFSLIPNGMPGLGTRMAVLFDAGVNSQ HHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCC KIGLTDFVRLTATAPAQRYGLYPRKGTIAPGSDADLVLWDRTQQVRITNDLFQSRIDYTP CCCHHHHEEEEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEHHHHHHHHCCCCC FEGRLVTGWPAMVLARGRIAVENGQVLRKPTMGRFLKARSGPQD CCCEEEECCHHHHHCCCEEEEECCCEEECCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5,6-dihydrouracil; H2O
Specific reaction: 5,6-dihydrouracil + H2O = 3-ureidopropanoate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765480 [H]