Click here to switch to the map view.

The map label for this gene is dapA [H]

Identifier: 162148494

GI number: 162148494

Start: 2812021

End: 2812968

Strand: Direct

Name: dapA [H]

Synonym: GDI_2715

Alternate gene names: 162148494

Gene position: 2812021-2812968 (Clockwise)

Preceding gene: 162148493

Following gene: 162148495

Centisome position: 71.3

GC content: 65.93

Gene sequence:

>948_bases
ATGATCCCTGCTTCCGCCACCCCCTTCCGGGGCGTCTATGCCGCGACGCTGCTTCCCCTGCACGAAGACGGGATGATCGA
CGCACCCGGCCTGGCCCGCCACATGAAGGACTGTACGTCCTCCCCGGACATCGTGGGTATCCTCTGCAATGGCCATGCCG
GCGAGAACCACCTGCTGAACCGCGAGGAGAAACGGCTGGTCGTCGAAACCGCCCGGCACGCGATCGGCATGGAGAAGATC
ATCGTCTCGGGCGTGCTGTCGGAAGACATCCAGGACGCCTGCCTGCAGGCCCGCGACGCGGTCGATGCCGGGGCGGATGC
CCTTCTGGTCTTTCCCCCCTTCTCCTGGGCAGTATCGCAGGATGCCGAGGCCATCGTCGCCCATCACCGTGCCATCTGCG
AGGCAGTGGATGCGCCGGTCATGCTATACCAGTCGTCGATCGGCACCGGCGGCATGGCCTATTCCCTTCCGATCCTGGAA
CGGCTGCTGCAGCTTCCCCGAATCGTGGCGATCAAGGAGGGAAGCTGGGAGACCAACGCCTATGACCGTCATCGTCGGCT
GGCGGCGCGCGTCGCCCCCCACGTCGAGGTCATGGCCTCGGGCGACGAGCATCTGCTGCCCTGCTTCGCGATTGGAACCA
CCGGCAGCCTCGTCAGCCTCGCGGCCATCCTGCCCCGCAGCATCGGCCGGCTGTGGAACGCCGTCCAGGCCCAGGACCTG
GACACCGCCCGCCGGGTCCATGCCGCCATCCAGCCCCTGGCGAACCTGATCTACGGCCGCGCCCCGTCCGGCCGCGCCAC
GCTGCGCCTGAAAGCCTGCCTGGTCATGCAGAAGACATGGTCGTCCTGCCGGACCAGGAAGGCATCCGAAGTTCTTTCAC
CGGAGGAATGGCGGGAATTGTCACAGGCTCTAGAATACGCGCTGGTAATGGAACAGGAACGTGACTGA

Upstream 100 bases:

>100_bases
TGGGCCGCCTGCTGGCGGAACGCATCCTGGGCGGCACACCGGACCTGAGCGCATTCGACCCTCACCGCTTTTCCCCGTCC
AGCATTCCGGAATCCTCGTC

Downstream 100 bases:

>100_bases
CACCATGACGGCCGAACGTGAACTCAATCTTGCCGAACACGCCTACGGGCAGATTCGGCGCATGATCCTGGAACGGGAAC
TGCCCGGGGGCATGTCGGTC

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MIPASATPFRGVYAATLLPLHEDGMIDAPGLARHMKDCTSSPDIVGILCNGHAGENHLLNREEKRLVVETARHAIGMEKI
IVSGVLSEDIQDACLQARDAVDAGADALLVFPPFSWAVSQDAEAIVAHHRAICEAVDAPVMLYQSSIGTGGMAYSLPILE
RLLQLPRIVAIKEGSWETNAYDRHRRLAARVAPHVEVMASGDEHLLPCFAIGTTGSLVSLAAILPRSIGRLWNAVQAQDL
DTARRVHAAIQPLANLIYGRAPSGRATLRLKACLVMQKTWSSCRTRKASEVLSPEEWRELSQALEYALVMEQERD

Sequences:

>Translated_315_residues
MIPASATPFRGVYAATLLPLHEDGMIDAPGLARHMKDCTSSPDIVGILCNGHAGENHLLNREEKRLVVETARHAIGMEKI
IVSGVLSEDIQDACLQARDAVDAGADALLVFPPFSWAVSQDAEAIVAHHRAICEAVDAPVMLYQSSIGTGGMAYSLPILE
RLLQLPRIVAIKEGSWETNAYDRHRRLAARVAPHVEVMASGDEHLLPCFAIGTTGSLVSLAAILPRSIGRLWNAVQAQDL
DTARRVHAAIQPLANLIYGRAPSGRATLRLKACLVMQKTWSSCRTRKASEVLSPEEWRELSQALEYALVMEQERD
>Mature_315_residues
MIPASATPFRGVYAATLLPLHEDGMIDAPGLARHMKDCTSSPDIVGILCNGHAGENHLLNREEKRLVVETARHAIGMEKI
IVSGVLSEDIQDACLQARDAVDAGADALLVFPPFSWAVSQDAEAIVAHHRAICEAVDAPVMLYQSSIGTGGMAYSLPILE
RLLQLPRIVAIKEGSWETNAYDRHRRLAARVAPHVEVMASGDEHLLPCFAIGTTGSLVSLAAILPRSIGRLWNAVQAQDL
DTARRVHAAIQPLANLIYGRAPSGRATLRLKACLVMQKTWSSCRTRKASEVLSPEEWRELSQALEYALVMEQERD

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=253, Percent_Identity=24.901185770751, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082415, Length=242, Percent_Identity=23.5537190082645, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 34320; Mature: 34320

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPASATPFRGVYAATLLPLHEDGMIDAPGLARHMKDCTSSPDIVGILCNGHAGENHLLN
CCCCCCCCCCHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
REEKRLVVETARHAIGMEKIIVSGVLSEDIQDACLQARDAVDAGADALLVFPPFSWAVSQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCC
DAEAIVAHHRAICEAVDAPVMLYQSSIGTGGMAYSLPILERLLQLPRIVAIKEGSWETNA
CHHHHHHHHHHHHHHHCCCCEEHECCCCCCCCEEHHHHHHHHHHCCCEEEEECCCCCCCH
YDRHRRLAARVAPHVEVMASGDEHLLPCFAIGTTGSLVSLAAILPRSIGRLWNAVQAQDL
HHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DTARRVHAAIQPLANLIYGRAPSGRATLRLKACLVMQKTWSSCRTRKASEVLSPEEWREL
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SQALEYALVMEQERD
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MIPASATPFRGVYAATLLPLHEDGMIDAPGLARHMKDCTSSPDIVGILCNGHAGENHLLN
CCCCCCCCCCHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
REEKRLVVETARHAIGMEKIIVSGVLSEDIQDACLQARDAVDAGADALLVFPPFSWAVSQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCC
DAEAIVAHHRAICEAVDAPVMLYQSSIGTGGMAYSLPILERLLQLPRIVAIKEGSWETNA
CHHHHHHHHHHHHHHHCCCCEEHECCCCCCCCEEHHHHHHHHHHCCCEEEEECCCCCCCH
YDRHRRLAARVAPHVEVMASGDEHLLPCFAIGTTGSLVSLAAILPRSIGRLWNAVQAQDL
HHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DTARRVHAAIQPLANLIYGRAPSGRATLRLKACLVMQKTWSSCRTRKASEVLSPEEWREL
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SQALEYALVMEQERD
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA