| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is pucG [H]
Identifier: 162148481
GI number: 162148481
Start: 2796704
End: 2797939
Strand: Reverse
Name: pucG [H]
Synonym: GDI_2701
Alternate gene names: 162148481
Gene position: 2797939-2796704 (Counterclockwise)
Preceding gene: 162148482
Following gene: 162148480
Centisome position: 70.94
GC content: 70.15
Gene sequence:
>1236_bases ATGTTCGGGCAGATCGATCCGCCGCAGCGGCTGCTGATGGGGCCGGGGCCGGTGAATGTGCATCCGCGCGTGCTGCGCGC GATGACGGCGGACATGCTGGGCCAGTTCGACCCGGAGATGACGGGGTACATGAACCAGACGATGGCGCTGTACCGCCAGG TGTTCATGACCGAAAACCGCTGGACCTTCCTGGTCGACGGCACGGCGCGGGCGGGGATCGAGGCCGCCCTGGTCTCGCTG GTCGAGCCGGGGGCGCGGCTGCTGATCCTGCGGGCGGGCCGGTTCGGGCTGCTGCTGTCGGAAATCGCGCAGCGCATCGG CGCCGAGATCCGCACCATCGACATCCCGTGGGGCGAGGTCGCGCCCCCGGAGCAGATCGAGGCCGCGATCATCGAACACC GGCCGCAGGTCTTCGCCACCATCCACGGCGATACCTCGACCACCATGGCCCAGCCGCTGGACGGCGTGGGGGCGATCTGC CGGCGGCACGGCGTGCTGTCCTATGTCGATGCCACGGCGACGCTGGGCGGCATGGCGGTGGCGACCGACGCCTGGGGCGT GGATGTGGTGACGGGCGGATTGCAGAAATGCATGGGCGGTCCGCCGGGCTCGGCCCCCATCACGATTTCGGACCGGGCGG CGGCGCATATCATGGCCCGCCGGCATGTCGAGGCCGGGATCAGGGGCGCCGATGCCCAGGATGGCAGCCGGACGCGGATC GGATCGAACTATTTCGACCTGGCCATGATCATGGAATACTGGTCCGAGAAGCGGCTGAACCACCACACCGAAGCGACCTC CATGCTCTATGCGGCGCGCGAGGCGGCGCGGATCATGGTGGAAGAGGGGCTGGAGGCGCGCTTCGCCCGGCATCGCGCCG CGAGTGAGGCCATGGCCGCCGGATTGCGGGCGATGGGCCTGACGCTGTACGGCCAGGATGCGTACCGCATGGCCAACGTC ACCGGCGTGTTCATCCCCGACGGCGTGGATGGTGAGCGCGCCCGCACCCGCATGCGCGAGGAGTTTGAGATCGAGATCGG CACCGCCTTCGGCCCGCTGGCGGGCCGGATCTGGCGCATCGGCGCCATGGGCTACAACGCCATGAAGCACAAGGTGCTGA TCACGCTGGGCGCGCTGGAAGCCGTGCTGGCCGCCGAAGGCCACGCCCTGCCGCGCGGGGCCGGCGTGGATGCCGCCCGC GCGTCCTACGAGGCCATGCCCGGGGCCGCGTCATGA
Upstream 100 bases:
>100_bases ATACGTTCTCGTCGCAGGTTCCGATGACGGGCGGATATTATTATGGGCGGGTCAATTTCACGCTCTGAGAAATTTTCTGA CATATATTGGGAATAACAAT
Downstream 100 bases:
>100_bases CGGGCTCCTATCCCGCGTCTTCCTGATCAACCATTTGATAAAAGATGGAAAATCCACCCAATCGGGTGGATTTTTTATTG CCGCGAAACGCGGCACGGGA
Product: serine-pyruvate aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MFGQIDPPQRLLMGPGPVNVHPRVLRAMTADMLGQFDPEMTGYMNQTMALYRQVFMTENRWTFLVDGTARAGIEAALVSL VEPGARLLILRAGRFGLLLSEIAQRIGAEIRTIDIPWGEVAPPEQIEAAIIEHRPQVFATIHGDTSTTMAQPLDGVGAIC RRHGVLSYVDATATLGGMAVATDAWGVDVVTGGLQKCMGGPPGSAPITISDRAAAHIMARRHVEAGIRGADAQDGSRTRI GSNYFDLAMIMEYWSEKRLNHHTEATSMLYAAREAARIMVEEGLEARFARHRAASEAMAAGLRAMGLTLYGQDAYRMANV TGVFIPDGVDGERARTRMREEFEIEIGTAFGPLAGRIWRIGAMGYNAMKHKVLITLGALEAVLAAEGHALPRGAGVDAAR ASYEAMPGAAS
Sequences:
>Translated_411_residues MFGQIDPPQRLLMGPGPVNVHPRVLRAMTADMLGQFDPEMTGYMNQTMALYRQVFMTENRWTFLVDGTARAGIEAALVSL VEPGARLLILRAGRFGLLLSEIAQRIGAEIRTIDIPWGEVAPPEQIEAAIIEHRPQVFATIHGDTSTTMAQPLDGVGAIC RRHGVLSYVDATATLGGMAVATDAWGVDVVTGGLQKCMGGPPGSAPITISDRAAAHIMARRHVEAGIRGADAQDGSRTRI GSNYFDLAMIMEYWSEKRLNHHTEATSMLYAAREAARIMVEEGLEARFARHRAASEAMAAGLRAMGLTLYGQDAYRMANV TGVFIPDGVDGERARTRMREEFEIEIGTAFGPLAGRIWRIGAMGYNAMKHKVLITLGALEAVLAAEGHALPRGAGVDAAR ASYEAMPGAAS >Mature_411_residues MFGQIDPPQRLLMGPGPVNVHPRVLRAMTADMLGQFDPEMTGYMNQTMALYRQVFMTENRWTFLVDGTARAGIEAALVSL VEPGARLLILRAGRFGLLLSEIAQRIGAEIRTIDIPWGEVAPPEQIEAAIIEHRPQVFATIHGDTSTTMAQPLDGVGAIC RRHGVLSYVDATATLGGMAVATDAWGVDVVTGGLQKCMGGPPGSAPITISDRAAAHIMARRHVEAGIRGADAQDGSRTRI GSNYFDLAMIMEYWSEKRLNHHTEATSMLYAAREAARIMVEEGLEARFARHRAASEAMAAGLRAMGLTLYGQDAYRMANV TGVFIPDGVDGERARTRMREEFEIEIGTAFGPLAGRIWRIGAMGYNAMKHKVLITLGALEAVLAAEGHALPRGAGVDAAR ASYEAMPGAAS
Specific function: Could encode ureidoglycolase or L-alanine:glyoxylate aminotransferase, or perhaps both activities [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=380, Percent_Identity=33.1578947368421, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17536281, Length=369, Percent_Identity=35.230352303523, Blast_Score=238, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6321079, Length=333, Percent_Identity=22.5225225225225, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI17530823, Length=385, Percent_Identity=33.2467532467532, Blast_Score=218, Evalue=5e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.-
Molecular weight: Translated: 44241; Mature: 44241
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGQIDPPQRLLMGPGPVNVHPRVLRAMTADMLGQFDPEMTGYMNQTMALYRQVFMTENR CCCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC WTFLVDGTARAGIEAALVSLVEPGARLLILRAGRFGLLLSEIAQRIGAEIRTIDIPWGEV EEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCC APPEQIEAAIIEHRPQVFATIHGDTSTTMAQPLDGVGAICRRHGVLSYVDATATLGGMAV CCHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCEEE ATDAWGVDVVTGGLQKCMGGPPGSAPITISDRAAAHIMARRHVEAGIRGADAQDGSRTRI EECCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GSNYFDLAMIMEYWSEKRLNHHTEATSMLYAAREAARIMVEEGLEARFARHRAASEAMAA CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRAMGLTLYGQDAYRMANVTGVFIPDGVDGERARTRMREEFEIEIGTAFGPLAGRIWRI HHHHHCEEEECCCHHEEECEEEEEECCCCCCHHHHHHHHHHEEEEECCCCCHHHHHHEEE GAMGYNAMKHKVLITLGALEAVLAAEGHALPRGAGVDAARASYEAMPGAAS ECCCCHHHHHEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MFGQIDPPQRLLMGPGPVNVHPRVLRAMTADMLGQFDPEMTGYMNQTMALYRQVFMTENR CCCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC WTFLVDGTARAGIEAALVSLVEPGARLLILRAGRFGLLLSEIAQRIGAEIRTIDIPWGEV EEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCC APPEQIEAAIIEHRPQVFATIHGDTSTTMAQPLDGVGAICRRHGVLSYVDATATLGGMAV CCHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCEEE ATDAWGVDVVTGGLQKCMGGPPGSAPITISDRAAAHIMARRHVEAGIRGADAQDGSRTRI EECCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GSNYFDLAMIMEYWSEKRLNHHTEATSMLYAAREAARIMVEEGLEARFARHRAASEAMAA CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRAMGLTLYGQDAYRMANVTGVFIPDGVDGERARTRMREEFEIEIGTAFGPLAGRIWRI HHHHHCEEEECCCHHEEECEEEEEECCCCCCHHHHHHHHHHEEEEECCCCCHHHHHHEEE GAMGYNAMKHKVLITLGALEAVLAAEGHALPRGAGVDAARASYEAMPGAAS ECCCCHHHHHEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]