| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162148464
Identifier: 162148464
GI number: 162148464
Start: 2779107
End: 2779670
Strand: Direct
Name: 162148464
Synonym: GDI_2684
Alternate gene names: NA
Gene position: 2779107-2779670 (Clockwise)
Preceding gene: 162148462
Following gene: 162148465
Centisome position: 70.46
GC content: 59.93
Gene sequence:
>564_bases ATGACCATTGATACGAAGAATGCTTTCCTCTCCGACGTGAAGACCCTGCGCGAACGGGCGCAGAAGTCTCTCGATGACGG AGCCGTAATGCCGTCCTACAAGGGGGACGTAAAGAAGACGATCGAGCTTCTTCAGGCGGTCGTCGCCACCGAACTTGTCT GTGTCCTGCGCTACACCATGCATTCCATTTCGGTCGAGGGCCTGACCAGCGAGAGCGTGGGCCGCGAGTTTGCCGAACAC GCAGCGTCCGAGCGCAAGCACATGCTGGCGGCGGCTCAGCGGATTGACCAGCTTGGCGGGGTCCCGAACTTCAATCCGGA AGGACTGGCCACACGCTCGGCGACGGAATACGGCAACGGTGGGAATCTCGTCGAGATGGTCAAGCAGGACCTGATCGCCG AGCGCGTCGTGATCGAGCATTATCAGGAGCTTATCCGCTATTTCGGCGATGACGATCCGACCACCCGCATCATGCTCGAA GGATTCCTGGCGGACGAGGAAGACCATGCCACCGACCTCCACGACCTGCTGGTGGCCCATGAAGGTGTTCCGTTCCTCTC CTGA
Upstream 100 bases:
>100_bases CAATAATAAGAATTTGCCAATAAACGCCCATCCAGGTTGCATGCAACCTTTCGCCATCACGACGTTACGAATTCATGTCT CAGACGAAGGGAACCCGGCC
Downstream 100 bases:
>100_bases CCGGCCCTGATCGGTTTCATCCTCCGGGCCTCAGACTCGGTGCTGGCCGACGATCTTCGACTTCAGGGTGTCTTCGATCA GTCGGGCTACCGTGGCGTCG
Product: ferritin-like domain
Products: NA
Alternate protein names: Ferritin Dps Family Protein; Ferritin And Dps; Ferritin-Like Domain Subfamily; Rubrerythrin Family Protein; RubrerythrinFerritin And Dps
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTIDTKNAFLSDVKTLRERAQKSLDDGAVMPSYKGDVKKTIELLQAVVATELVCVLRYTMHSISVEGLTSESVGREFAEH AASERKHMLAAAQRIDQLGGVPNFNPEGLATRSATEYGNGGNLVEMVKQDLIAERVVIEHYQELIRYFGDDDPTTRIMLE GFLADEEDHATDLHDLLVAHEGVPFLS
Sequences:
>Translated_187_residues MTIDTKNAFLSDVKTLRERAQKSLDDGAVMPSYKGDVKKTIELLQAVVATELVCVLRYTMHSISVEGLTSESVGREFAEH AASERKHMLAAAQRIDQLGGVPNFNPEGLATRSATEYGNGGNLVEMVKQDLIAERVVIEHYQELIRYFGDDDPTTRIMLE GFLADEEDHATDLHDLLVAHEGVPFLS >Mature_186_residues TIDTKNAFLSDVKTLRERAQKSLDDGAVMPSYKGDVKKTIELLQAVVATELVCVLRYTMHSISVEGLTSESVGREFAEHA ASERKHMLAAAQRIDQLGGVPNFNPEGLATRSATEYGNGGNLVEMVKQDLIAERVVIEHYQELIRYFGDDDPTTRIMLEG FLADEEDHATDLHDLLVAHEGVPFLS
Specific function: Unknown
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20704; Mature: 20572
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDTKNAFLSDVKTLRERAQKSLDDGAVMPSYKGDVKKTIELLQAVVATELVCVLRYTM CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HSISVEGLTSESVGREFAEHAASERKHMLAAAQRIDQLGGVPNFNPEGLATRSATEYGNG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCC GNLVEMVKQDLIAERVVIEHYQELIRYFGDDDPTTRIMLEGFLADEEDHATDLHDLLVAH CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH EGVPFLS CCCCCCC >Mature Secondary Structure TIDTKNAFLSDVKTLRERAQKSLDDGAVMPSYKGDVKKTIELLQAVVATELVCVLRYTM CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HSISVEGLTSESVGREFAEHAASERKHMLAAAQRIDQLGGVPNFNPEGLATRSATEYGNG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCC GNLVEMVKQDLIAERVVIEHYQELIRYFGDDDPTTRIMLEGFLADEEDHATDLHDLLVAH CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH EGVPFLS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA