BacMap

Definition	Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession	NC_010125
Length	3,944,163

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The map label for this gene is fabG [H]

Identifier: 162148459

GI number: 162148459

Start: 2774728

End: 2775510

Strand: Reverse

Name: fabG [H]

Synonym: GDI_2679

Alternate gene names: 162148459

Gene position: 2775510-2774728 (Counterclockwise)

Preceding gene: 162148463

Following gene: 162148458

Centisome position: 70.37

GC content: 65.26

Gene sequence:

>783_bases
ATGCCCGTACAGGGAGCACGCCCGGACAATTCGCCATCTGGGCGCATCCAGGACAAGGTTGCCGTGATCACCGGTGCAGC
CAACGGCATGGGCCGCGCGACGGCGGAACGTTTCGCGGCCGAGGGCGCGAAACTGGTCCTGGCCGACCTCGACAGGGAAA
AGCTGGAAGCCCTGGTGGCCGAGATCGCGGGGCGCGGTATTCAGGTGACAGGCGTGCCCGGCGACGTCAGCCGCGAGGCC
GACATGCAGGCTCTGATGGATGAAGCCGTCGCGCATTTCGGCCGGATCGATATCCTGATCGCCAATGCCGGTATCATCCC
GGAGGCCGACCTCGCGTCCGCCACCGTCGATCTGTGGGACCACACGATGGCTGTCGACGGACGCGGCATGTTCCTCAGCT
GCAAATATGCCGCGGCCGAAATGGTAAAGGCGGGAAAGGGGGCCATCGTCTGCCTGTCGTCGATTTCCGCCTTTGCGGGA
CAGAAAGGCCAGGCTGTGTACGGCCCGGCGAAATTCGTGGCGTCCGGGTTGACCAAGCACCTCGCCATCGACCTTGCCGA
CAAGGGCGTGCGCGTCAACGCCGTGGCCCCGGGTACGATCGACACGCCCGCCGTGGCCAAGCTGGGCAAGGAGGGCATCG
CGAAAGTGGTCGCCATGCACCCGCTGGGCCGCATGGGAAAGCCAGAAGAAGTCGCCAGCGCGATCCTGTTCCTGGCATCG
GACGAGGCATCCTTCATCACGGGTGCCGTCCTGCCGGTGGATGGTGGATATCTCGCCCAGTAA

Upstream 100 bases:

>100_bases
GACGCATACGCCCGCCCGCCGGGGAGCGACCTGAAAAAGAAGGTCAACCTGACCGGCCTTCGCCCGTTGGGTGGTATCCA
CCCCATCGCAGGAGACGAAA

Downstream 100 bases:

>100_bases
TCGTGCGGTAACCGTTCCGCATCAGCGGCGGGCAGGCTGAGGCCGTGCATGCGACTGCCGCCCGTGGGGAGCCGAAGGAT
AGCGACCTGATCGGCGTGAT

Product: short-chain dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MPVQGARPDNSPSGRIQDKVAVITGAANGMGRATAERFAAEGAKLVLADLDREKLEALVAEIAGRGIQVTGVPGDVSREA
DMQALMDEAVAHFGRIDILIANAGIIPEADLASATVDLWDHTMAVDGRGMFLSCKYAAAEMVKAGKGAIVCLSSISAFAG
QKGQAVYGPAKFVASGLTKHLAIDLADKGVRVNAVAPGTIDTPAVAKLGKEGIAKVVAMHPLGRMGKPEEVASAILFLAS
DEASFITGAVLPVDGGYLAQ

Sequences:

>Translated_260_residues
MPVQGARPDNSPSGRIQDKVAVITGAANGMGRATAERFAAEGAKLVLADLDREKLEALVAEIAGRGIQVTGVPGDVSREA
DMQALMDEAVAHFGRIDILIANAGIIPEADLASATVDLWDHTMAVDGRGMFLSCKYAAAEMVKAGKGAIVCLSSISAFAG
QKGQAVYGPAKFVASGLTKHLAIDLADKGVRVNAVAPGTIDTPAVAKLGKEGIAKVVAMHPLGRMGKPEEVASAILFLAS
DEASFITGAVLPVDGGYLAQ
>Mature_259_residues
PVQGARPDNSPSGRIQDKVAVITGAANGMGRATAERFAAEGAKLVLADLDREKLEALVAEIAGRGIQVTGVPGDVSREAD
MQALMDEAVAHFGRIDILIANAGIIPEADLASATVDLWDHTMAVDGRGMFLSCKYAAAEMVKAGKGAIVCLSSISAFAGQ
KGQAVYGPAKFVASGLTKHLAIDLADKGVRVNAVAPGTIDTPAVAKLGKEGIAKVVAMHPLGRMGKPEEVASAILFLASD
EASFITGAVLPVDGGYLAQ

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=36.0655737704918, Blast_Score=145, Evalue=3e-35,
Organism=Homo sapiens, GI15277342, Length=254, Percent_Identity=35.4330708661417, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=34.7280334728033, Blast_Score=128, Evalue=4e-30,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=32.2448979591837, Blast_Score=123, Evalue=1e-28,
Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=32.6612903225806, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI66933014, Length=253, Percent_Identity=31.6205533596838, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=33.8645418326693, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI4758504, Length=262, Percent_Identity=33.969465648855, Blast_Score=111, Evalue=6e-25,
Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=30.9803921568627, Blast_Score=107, Evalue=9e-24,
Organism=Homo sapiens, GI59889578, Length=226, Percent_Identity=33.6283185840708, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI126723191, Length=201, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI33667109, Length=204, Percent_Identity=31.8627450980392, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=31.5352697095436, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI83715985, Length=262, Percent_Identity=32.824427480916, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI31542939, Length=208, Percent_Identity=32.2115384615385, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI4504505, Length=255, Percent_Identity=30.1960784313725, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI142976729, Length=237, Percent_Identity=27.8481012658228, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI4503301, Length=256, Percent_Identity=30.859375, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI40807363, Length=196, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI109715829, Length=244, Percent_Identity=26.2295081967213, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI210032110, Length=187, Percent_Identity=26.7379679144385, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=30.0518134715026, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI310128830, Length=198, Percent_Identity=28.7878787878788, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI310115468, Length=198, Percent_Identity=28.7878787878788, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI209862901, Length=205, Percent_Identity=29.2682926829268, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI19923983, Length=205, Percent_Identity=29.2682926829268, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI302344755, Length=108, Percent_Identity=37.962962962963, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI224922801, Length=174, Percent_Identity=31.0344827586207, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4503817, Length=220, Percent_Identity=24.0909090909091, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI225579078, Length=202, Percent_Identity=28.2178217821782, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=35.2697095435685, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=34.5238095238095, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1787905, Length=255, Percent_Identity=34.1176470588235, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=31.0483870967742, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=31.404958677686, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1790717, Length=242, Percent_Identity=28.5123966942149, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=33.201581027668, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=31.9838056680162, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=27.1255060728745, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=31.4516129032258, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=29.5275590551181, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI2367365, Length=250, Percent_Identity=30.4, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1787526, Length=245, Percent_Identity=23.265306122449, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787820, Length=244, Percent_Identity=25, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788891, Length=264, Percent_Identity=27.6515151515151, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=37.3983739837398, Blast_Score=140, Evalue=6e-34,
Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=33.0739299610895, Blast_Score=138, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=31.496062992126, Blast_Score=135, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=35.4961832061069, Blast_Score=129, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=35.9183673469388, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=35.7429718875502, Blast_Score=128, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=34.6153846153846, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=36.1216730038023, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17531453, Length=263, Percent_Identity=34.9809885931559, Blast_Score=123, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=34.6774193548387, Blast_Score=121, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=35.2490421455939, Blast_Score=120, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=34.0823970037453, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17562908, Length=260, Percent_Identity=35, Blast_Score=118, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=32.4427480916031, Blast_Score=118, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=32.2097378277154, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=32.9501915708812, Blast_Score=111, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17560220, Length=266, Percent_Identity=32.7067669172932, Blast_Score=110, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=32.7935222672065, Blast_Score=110, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=32.3076923076923, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17563726, Length=262, Percent_Identity=33.587786259542, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17551412, Length=262, Percent_Identity=32.4427480916031, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=32.7067669172932, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=31.4606741573034, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=33.2075471698113, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17538182, Length=249, Percent_Identity=29.718875502008, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=30.188679245283, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17536025, Length=268, Percent_Identity=32.089552238806, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI193203117, Length=190, Percent_Identity=28.4210526315789, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17536651, Length=259, Percent_Identity=29.3436293436293, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193203115, Length=242, Percent_Identity=28.099173553719, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=30.9278350515464, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17508895, Length=194, Percent_Identity=26.2886597938144, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17567345, Length=208, Percent_Identity=26.4423076923077, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17568967, Length=192, Percent_Identity=32.8125, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=248, Percent_Identity=28.6290322580645, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17561272, Length=260, Percent_Identity=30.3846153846154, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=214, Percent_Identity=30.3738317757009, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=31.25, Blast_Score=101, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6322861, Length=254, Percent_Identity=27.9527559055118, Blast_Score=88, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24644339, Length=245, Percent_Identity=40, Blast_Score=154, Evalue=4e-38,
Organism=Drosophila melanogaster, GI23397609, Length=247, Percent_Identity=36.8421052631579, Blast_Score=145, Evalue=3e-35,
Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=36.6935483870968, Blast_Score=144, Evalue=8e-35,
Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=38.3064516129032, Blast_Score=143, Evalue=1e-34,
Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=32.5301204819277, Blast_Score=130, Evalue=9e-31,
Organism=Drosophila melanogaster, GI24644337, Length=246, Percent_Identity=36.9918699186992, Blast_Score=127, Evalue=9e-30,
Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=35.3658536585366, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI17737361, Length=253, Percent_Identity=32.4110671936759, Blast_Score=117, Evalue=7e-27,
Organism=Drosophila melanogaster, GI18859837, Length=248, Percent_Identity=30.6451612903226, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI21358495, Length=188, Percent_Identity=29.7872340425532, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24640492, Length=195, Percent_Identity=26.1538461538462, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI116007236, Length=241, Percent_Identity=26.5560165975104, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281364892, Length=191, Percent_Identity=26.1780104712042, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24584748, Length=186, Percent_Identity=28.494623655914, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161076933, Length=186, Percent_Identity=28.494623655914, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357673, Length=206, Percent_Identity=29.126213592233, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574402, Length=187, Percent_Identity=27.807486631016, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24584744, Length=187, Percent_Identity=27.807486631016, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581726, Length=194, Percent_Identity=26.2886597938144, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI28571387, Length=236, Percent_Identity=25.4237288135593, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24641232, Length=237, Percent_Identity=26.1603375527426, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26632; Mature: 26501

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVQGARPDNSPSGRIQDKVAVITGAANGMGRATAERFAAEGAKLVLADLDREKLEALVA
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHH
EIAGRGIQVTGVPGDVSREADMQALMDEAVAHFGRIDILIANAGIIPEADLASATVDLWD
HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHC
HTMAVDGRGMFLSCKYAAAEMVKAGKGAIVCLSSISAFAGQKGQAVYGPAKFVASGLTKH
CEEEECCCCEEEEEHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCEEECHHHHHHHHHHHH
LAIDLADKGVRVNAVAPGTIDTPAVAKLGKEGIAKVVAMHPLGRMGKPEEVASAILFLAS
EEEEECCCCEEEEEECCCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEC
DEASFITGAVLPVDGGYLAQ
CCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure 
PVQGARPDNSPSGRIQDKVAVITGAANGMGRATAERFAAEGAKLVLADLDREKLEALVA
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHH
EIAGRGIQVTGVPGDVSREADMQALMDEAVAHFGRIDILIANAGIIPEADLASATVDLWD
HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHC
HTMAVDGRGMFLSCKYAAAEMVKAGKGAIVCLSSISAFAGQKGQAVYGPAKFVASGLTKH
CEEEECCCCEEEEEHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCEEECHHHHHHHHHHHH
LAIDLADKGVRVNAVAPGTIDTPAVAKLGKEGIAKVVAMHPLGRMGKPEEVASAILFLAS
EEEEECCCCEEEEEECCCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEC
DEASFITGAVLPVDGGYLAQ
CCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]