The gene/protein map for NC_007796 is currently unavailable.
Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is rbtD [H]

Identifier: 162148423

GI number: 162148423

Start: 2737216

End: 2737944

Strand: Direct

Name: rbtD [H]

Synonym: GDI_2642

Alternate gene names: 162148423

Gene position: 2737216-2737944 (Clockwise)

Preceding gene: 162148422

Following gene: 162148424

Centisome position: 69.4

GC content: 64.33

Gene sequence:

>729_bases
ATGACGAACTCTCTTGAAGGCAAGATCGCGGCTGTGACCGGCGCGGCGTCGGGCATCGGCCTGGAATGCGTCCGTCACAT
GATCGATGCGGGCGCCGAGGTCTATCTGCTGGACCGTGACGCATCCGCGCTGGACAAGGCGGCGGCCGAACTGGGCGGAA
AGGCCCATGCCTGCGTTGTCGACCTGTTTGACTACCCGACGGTAGATGCCGCCGTTTCCCGCATCGTCGGCGAGAAAGGG
CAACTGGACATCTTCCATGCCAACGCGGGCGCCTATGTCGGCGGCAACGTCTGGGACGGAAACCCCGATAGCTGGGACCC
GATGCTGCACCTGAACATCAATGCGGCATTCCGTTCGGTCCGCGCGGCCCTGCCGCAGATGATGAAGCAGGAATCCGGCG
ACATCATCGTGACCAGTTCCATCGCCGGCGTGGTCCCGATCATGGCGGAGCCGATCTACACCGCATCGAAGCACGCCGTA
CAGGCTTTCGTTCATACGGTGCGCCGCCAGGTGGCCCAGTTCGGCATCCGCGTCGGCGCGATCCAGCCCGGCCCCGTCGT
GACCCCCCTGCTGAAGGACTGGGACCCGGCGCGGCTGAAGGCCAATATCGAGGCCGGTGCGATGATGGAAGCCAACGAGG
TCGCCGAAGCCGTGATGTTCATGCTGACCCGCCGCAAGGGGGTCATCGTCCGCGACCTGGTGCTTCTGCCGCATCATTTC
GACGTATGA

Upstream 100 bases:

>100_bases
CATCAGCCGCCGGCGTCGCGCCGGCAAGGCGCGCTGGACGGGTTTGCCGGCATGGCGCGCTGAATGGGGCTCTCTGTGAC
TTCTGACAAGGATAACCACC

Downstream 100 bases:

>100_bases
TCATCAGATGAACCGTACCGGCGGCCCGCGCGCCGGTTGCGCGCGACGCCCCGGGAAAGTCCCGGCCAGGGCACAGTCGC
GCGCCCCTGGGCCGAAGCTT

Product: ribitol 2-dehydrogenase

Products: NA

Alternate protein names: RDH [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTNSLEGKIAAVTGAASGIGLECVRHMIDAGAEVYLLDRDASALDKAAAELGGKAHACVVDLFDYPTVDAAVSRIVGEKG
QLDIFHANAGAYVGGNVWDGNPDSWDPMLHLNINAAFRSVRAALPQMMKQESGDIIVTSSIAGVVPIMAEPIYTASKHAV
QAFVHTVRRQVAQFGIRVGAIQPGPVVTPLLKDWDPARLKANIEAGAMMEANEVAEAVMFMLTRRKGVIVRDLVLLPHHF
DV

Sequences:

>Translated_242_residues
MTNSLEGKIAAVTGAASGIGLECVRHMIDAGAEVYLLDRDASALDKAAAELGGKAHACVVDLFDYPTVDAAVSRIVGEKG
QLDIFHANAGAYVGGNVWDGNPDSWDPMLHLNINAAFRSVRAALPQMMKQESGDIIVTSSIAGVVPIMAEPIYTASKHAV
QAFVHTVRRQVAQFGIRVGAIQPGPVVTPLLKDWDPARLKANIEAGAMMEANEVAEAVMFMLTRRKGVIVRDLVLLPHHF
DV
>Mature_241_residues
TNSLEGKIAAVTGAASGIGLECVRHMIDAGAEVYLLDRDASALDKAAAELGGKAHACVVDLFDYPTVDAAVSRIVGEKGQ
LDIFHANAGAYVGGNVWDGNPDSWDPMLHLNINAAFRSVRAALPQMMKQESGDIIVTSSIAGVVPIMAEPIYTASKHAVQ
AFVHTVRRQVAQFGIRVGAIQPGPVVTPLLKDWDPARLKANIEAGAMMEANEVAEAVMFMLTRRKGVIVRDLVLLPHHFD
V

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=195, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI40254992, Length=215, Percent_Identity=29.3023255813954, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI109715829, Length=244, Percent_Identity=28.2786885245902, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI31542939, Length=198, Percent_Identity=31.8181818181818, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI7706318, Length=193, Percent_Identity=28.4974093264249, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI142976729, Length=235, Percent_Identity=25.9574468085106, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI224922801, Length=170, Percent_Identity=31.7647058823529, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI7657478, Length=188, Percent_Identity=30.3191489361702, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI32483357, Length=241, Percent_Identity=25.7261410788382, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI66933014, Length=195, Percent_Identity=31.2820512820513, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI4758504, Length=203, Percent_Identity=28.0788177339901, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI5031737, Length=192, Percent_Identity=28.125, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=28.125, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI223718074, Length=193, Percent_Identity=29.5336787564767, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI157739938, Length=237, Percent_Identity=24.4725738396624, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=26.5060240963855, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI210032110, Length=234, Percent_Identity=26.0683760683761, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI32455239, Length=172, Percent_Identity=30.8139534883721, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI5031765, Length=172, Percent_Identity=30.8139534883721, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=28.021978021978, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI7705925, Length=230, Percent_Identity=26.9565217391304, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI59889578, Length=208, Percent_Identity=28.3653846153846, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87082100, Length=190, Percent_Identity=36.3157894736842, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787335, Length=221, Percent_Identity=28.9592760180996, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI87082160, Length=193, Percent_Identity=30.0518134715026, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788459, Length=188, Percent_Identity=27.6595744680851, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787820, Length=235, Percent_Identity=26.3829787234043, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI2367365, Length=198, Percent_Identity=32.8282828282828, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789208, Length=188, Percent_Identity=29.7872340425532, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786812, Length=230, Percent_Identity=24.7826086956522, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787905, Length=201, Percent_Identity=31.3432835820896, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787526, Length=210, Percent_Identity=30, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1786701, Length=190, Percent_Identity=26.8421052631579, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1789378, Length=195, Percent_Identity=32.3076923076923, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=241, Percent_Identity=28.6307053941909, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=27.2357723577236, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17555706, Length=228, Percent_Identity=28.0701754385965, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17564282, Length=186, Percent_Identity=26.8817204301075, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17560676, Length=233, Percent_Identity=24.8927038626609, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=249, Percent_Identity=27.3092369477912, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=246, Percent_Identity=25.609756097561, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=241, Percent_Identity=27.3858921161826, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=228, Percent_Identity=28.0701754385965, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=201, Percent_Identity=30.3482587064677, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=192, Percent_Identity=28.125, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=244, Percent_Identity=26.6393442622951, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=193, Percent_Identity=24.8704663212435, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=166, Percent_Identity=27.1084337349398, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562990, Length=241, Percent_Identity=24.0663900414938, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193203117, Length=162, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562906, Length=246, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17568967, Length=192, Percent_Identity=27.0833333333333, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=199, Percent_Identity=26.6331658291457, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17560150, Length=199, Percent_Identity=24.1206030150754, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=251, Percent_Identity=25.0996015936255, Blast_Score=74, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322227, Length=197, Percent_Identity=28.9340101522843, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI23397609, Length=232, Percent_Identity=29.7413793103448, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI116007236, Length=243, Percent_Identity=28.8065843621399, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI21358495, Length=243, Percent_Identity=28.3950617283951, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571387, Length=231, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28571526, Length=194, Percent_Identity=28.3505154639175, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24639444, Length=224, Percent_Identity=29.0178571428571, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21355319, Length=237, Percent_Identity=27.0042194092827, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21357041, Length=193, Percent_Identity=25.9067357512953, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24641232, Length=246, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007234, Length=245, Percent_Identity=28.9795918367347, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24644339, Length=191, Percent_Identity=28.2722513089005, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI116007238, Length=182, Percent_Identity=29.1208791208791, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355631, Length=172, Percent_Identity=26.1627906976744, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24648944, Length=238, Percent_Identity=27.7310924369748, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649181, Length=189, Percent_Identity=25.3968253968254, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281364494, Length=248, Percent_Identity=28.2258064516129, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24663911, Length=246, Percent_Identity=26.8292682926829, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI116007232, Length=184, Percent_Identity=29.3478260869565, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI17737361, Length=199, Percent_Identity=27.6381909547739, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357673, Length=194, Percent_Identity=29.8969072164948, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24640442, Length=195, Percent_Identity=27.1794871794872, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281364892, Length=173, Percent_Identity=26.5895953757225, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24580925, Length=202, Percent_Identity=23.7623762376238, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI18859837, Length=190, Percent_Identity=27.8947368421053, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.56 [H]

Molecular weight: Translated: 25833; Mature: 25702

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTNSLEGKIAAVTGAASGIGLECVRHMIDAGAEVYLLDRDASALDKAAAELGGKAHACVV
CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEE
DLFDYPTVDAAVSRIVGEKGQLDIFHANAGAYVGGNVWDGNPDSWDPMLHLNINAAFRSV
EECCCCCHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEEHHHHHHHH
RAALPQMMKQESGDIIVTSSIAGVVPIMAEPIYTASKHAVQAFVHTVRRQVAQFGIRVGA
HHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEECC
IQPGPVVTPLLKDWDPARLKANIEAGAMMEANEVAEAVMFMLTRRKGVIVRDLVLLPHHF
CCCCCCCCHHHCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHEECCCCC
DV
CC
>Mature Secondary Structure 
TNSLEGKIAAVTGAASGIGLECVRHMIDAGAEVYLLDRDASALDKAAAELGGKAHACVV
CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEE
DLFDYPTVDAAVSRIVGEKGQLDIFHANAGAYVGGNVWDGNPDSWDPMLHLNINAAFRSV
EECCCCCHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEEHHHHHHHH
RAALPQMMKQESGDIIVTSSIAGVVPIMAEPIYTASKHAVQAFVHTVRRQVAQFGIRVGA
HHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEECC
IQPGPVVTPLLKDWDPARLKANIEAGAMMEANEVAEAVMFMLTRRKGVIVRDLVLLPHHF
CCCCCCCCHHHCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHEECCCCC
DV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3904726; 2933028; 3891331 [H]