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The map label for this gene is xylB [H]

Identifier: 162148420

GI number: 162148420

Start: 2733238

End: 2734716

Strand: Direct

Name: xylB [H]

Synonym: GDI_2639

Alternate gene names: 162148420

Gene position: 2733238-2734716 (Clockwise)

Preceding gene: 162148419

Following gene: 162148422

Centisome position: 69.3

GC content: 70.99

Gene sequence:

>1479_bases
ATGACCTATCTGGGACTGGATATCGGAACCACCGCGACCAAGGCGATCCTGGTCGATGACCGCCAATCGGTCCTGGCCGC
CGCCACCGTCGCGTCGCGGATCGATCAGCCTGCCCCGGGCCTGAGCGAGCAGGACCCCGATACATGGATCGCCGGCGTGC
GCCTGGCGCTGGCCCGGCTGCGCGACGAGGCGGGGCCGGCCTATGGCGCCGTCCGCGCGATCGGCCTGTCGGGTCACATG
CATTCGGTCGCCCTGCTGGATGACGGGCTGCACCCCGTCCGCCCCGCCCTGCTGTGGAACGACACGCGGGGCCAGGCGCA
GGCGCAACGCCTGCTTCAGGACGTGCCGGACATCAGCCGGGCCACGGGCGTGCGTCCTATGGCCAGCTTCAGCGCGGCGA
AGCTGCTGTGGATCAGGGAGAACGATCCGGCGGCGTTCGCGGCGACGCGGCACGTGCTGTGGGCCAAGGATTATGTCCGC
CTGTGGCTGACCGGCGCGCTGGCCACGGATATGTCGGACGCCGCCGGGTCGCAATTGTTCGACCAGCAAAACCGCACCTG
GTTCGCCCCGGTCCGCGACTATCTGGGGCTCGGCCCCGCTATCCTGCCCGAACTGCGGGACGGCACCGACTGCGCCGGAC
GCCTGCGCACGGCGACGGCCCGGGATCTGGGCCTGCCCCCCGGCATAGCCGTCGCCACGGGCGGCGGCGACACGCCGGTC
GGGGCGGTCGGGCTGGGCCGGGTCGATGCGGGGCAGTCCTATATCTCGCTGGGGACGGGCGCGGTCTACGTCACCGTTCA
GGACACGTACGCCCCGGACGAGGCGGTGGGCCTGCACACGTTCGCCCATTGCGTTCCCCGCCGCTGGTACCAGATGGCCG
CGATGTTGAACGGCGCGAGCTGCCTGGCCTGGGTGGCGGCCCTGTGCCGCGAGAGCGATCTCCCCGCCCTGCTTCGGCGG
GTGGAGGCGCGTGGACCCGGCCCCAGCCGCATCCTGTTCCAGCCCTATCTTCGCGGGGAACGCACGCCCCACGACGATGC
CCTGGCCCGGGGCGCCTTCATCGGCCTCGACGCATCGTGCGATGTGGTGGACCTGGCCCGGGCGGTGCTGGAAGGGGTGG
CGTTCTCGCTGCGCCAGGGCCAGGACCTTCTGGCGTGCCAGCAGGCGATTTCCGGCCCTGTCCCACTGATCGGCGGCGGT
GCCCGCAGTCCGGAATGGGCCCGCATCATGGCGACGGTCCTGGGCCGCGACCTGGTCATTCCGCGCAATGCCGAACATGC
CTGCGCCCTGGGCGCGGCCCGGCTGGGCATGGTGGCGGATGGATGGACGATGGCGGACGCCATGCCGGCTTTCGAGATCG
CGCAGGCGATTGCGCCCGACCACGAAGCGATCCCGCTCTATGACGCGCAATATGCGCAATTCGAACGGCTGTATCCGGCC
ATTCGATCCATCGGCCAGGGCACGGCCGCCGGCCTGTAA

Upstream 100 bases:

>100_bases
GGCGTCGGTCGTCCAGTTCCTGGCGTCCGACGCCGCCAGCCTGATGACCGGGGCGATCATCAATGTCGATGCCGGGTTCA
CGGTATGGTAATGCGGCCCC

Downstream 100 bases:

>100_bases
CGCAGGGGCGGTCCGGCCCCGTCACGACGAAGGCCGGAGCCGTTCCCGTCCCGCATGCGGGAAGGACGGCTCCGGCCCCG
GCCTGGTGTTCAGAACAGTT

Product: xylulose kinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MTYLGLDIGTTATKAILVDDRQSVLAAATVASRIDQPAPGLSEQDPDTWIAGVRLALARLRDEAGPAYGAVRAIGLSGHM
HSVALLDDGLHPVRPALLWNDTRGQAQAQRLLQDVPDISRATGVRPMASFSAAKLLWIRENDPAAFAATRHVLWAKDYVR
LWLTGALATDMSDAAGSQLFDQQNRTWFAPVRDYLGLGPAILPELRDGTDCAGRLRTATARDLGLPPGIAVATGGGDTPV
GAVGLGRVDAGQSYISLGTGAVYVTVQDTYAPDEAVGLHTFAHCVPRRWYQMAAMLNGASCLAWVAALCRESDLPALLRR
VEARGPGPSRILFQPYLRGERTPHDDALARGAFIGLDASCDVVDLARAVLEGVAFSLRQGQDLLACQQAISGPVPLIGGG
ARSPEWARIMATVLGRDLVIPRNAEHACALGAARLGMVADGWTMADAMPAFEIAQAIAPDHEAIPLYDAQYAQFERLYPA
IRSIGQGTAAGL

Sequences:

>Translated_492_residues
MTYLGLDIGTTATKAILVDDRQSVLAAATVASRIDQPAPGLSEQDPDTWIAGVRLALARLRDEAGPAYGAVRAIGLSGHM
HSVALLDDGLHPVRPALLWNDTRGQAQAQRLLQDVPDISRATGVRPMASFSAAKLLWIRENDPAAFAATRHVLWAKDYVR
LWLTGALATDMSDAAGSQLFDQQNRTWFAPVRDYLGLGPAILPELRDGTDCAGRLRTATARDLGLPPGIAVATGGGDTPV
GAVGLGRVDAGQSYISLGTGAVYVTVQDTYAPDEAVGLHTFAHCVPRRWYQMAAMLNGASCLAWVAALCRESDLPALLRR
VEARGPGPSRILFQPYLRGERTPHDDALARGAFIGLDASCDVVDLARAVLEGVAFSLRQGQDLLACQQAISGPVPLIGGG
ARSPEWARIMATVLGRDLVIPRNAEHACALGAARLGMVADGWTMADAMPAFEIAQAIAPDHEAIPLYDAQYAQFERLYPA
IRSIGQGTAAGL
>Mature_491_residues
TYLGLDIGTTATKAILVDDRQSVLAAATVASRIDQPAPGLSEQDPDTWIAGVRLALARLRDEAGPAYGAVRAIGLSGHMH
SVALLDDGLHPVRPALLWNDTRGQAQAQRLLQDVPDISRATGVRPMASFSAAKLLWIRENDPAAFAATRHVLWAKDYVRL
WLTGALATDMSDAAGSQLFDQQNRTWFAPVRDYLGLGPAILPELRDGTDCAGRLRTATARDLGLPPGIAVATGGGDTPVG
AVGLGRVDAGQSYISLGTGAVYVTVQDTYAPDEAVGLHTFAHCVPRRWYQMAAMLNGASCLAWVAALCRESDLPALLRRV
EARGPGPSRILFQPYLRGERTPHDDALARGAFIGLDASCDVVDLARAVLEGVAFSLRQGQDLLACQQAISGPVPLIGGGA
RSPEWARIMATVLGRDLVIPRNAEHACALGAARLGMVADGWTMADAMPAFEIAQAIAPDHEAIPLYDAQYAQFERLYPAI
RSIGQGTAAGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI42794763, Length=402, Percent_Identity=24.1293532338308, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI4504007, Length=402, Percent_Identity=24.1293532338308, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI189409120, Length=402, Percent_Identity=24.1293532338308, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI1789987, Length=478, Percent_Identity=37.6569037656904, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI1790005, Length=494, Percent_Identity=23.4817813765182, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1790361, Length=463, Percent_Identity=23.5421166306695, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789168, Length=449, Percent_Identity=24.2761692650334, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1787789, Length=517, Percent_Identity=25.3384912959381, Blast_Score=82, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17535599, Length=449, Percent_Identity=24.7216035634744, Blast_Score=104, Evalue=9e-23,
Organism=Drosophila melanogaster, GI17864214, Length=458, Percent_Identity=23.1441048034935, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24654573, Length=387, Percent_Identity=23.5142118863049, Blast_Score=86, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 52202; Mature: 52071

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYLGLDIGTTATKAILVDDRQSVLAAATVASRIDQPAPGLSEQDPDTWIAGVRLALARL
CEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
RDEAGPAYGAVRAIGLSGHMHSVALLDDGLHPVRPALLWNDTRGQAQAQRLLQDVPDISR
HHHCCCCHHHHEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHCCCHHH
ATGVRPMASFSAAKLLWIRENDPAAFAATRHVLWAKDYVRLWLTGALATDMSDAAGSQLF
HCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DQQNRTWFAPVRDYLGLGPAILPELRDGTDCAGRLRTATARDLGLPPGIAVATGGGDTPV
HHCCCEEEHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
GAVGLGRVDAGQSYISLGTGAVYVTVQDTYAPDEAVGLHTFAHCVPRRWYQMAAMLNGAS
CEEECCCCCCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
CLAWVAALCRESDLPALLRRVEARGPGPSRILFQPYLRGERTPHDDALARGAFIGLDASC
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECHHHCCCCCCCHHHHHCCEEEECCCCC
DVVDLARAVLEGVAFSLRQGQDLLACQQAISGPVPLIGGGARSPEWARIMATVLGRDLVI
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCCEEC
PRNAEHACALGAARLGMVADGWTMADAMPAFEIAQAIAPDHEAIPLYDAQYAQFERLYPA
CCCCCHHHHHHHHHHCEEECCCHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
IRSIGQGTAAGL
HHHHCCCCCCCC
>Mature Secondary Structure 
TYLGLDIGTTATKAILVDDRQSVLAAATVASRIDQPAPGLSEQDPDTWIAGVRLALARL
EEEEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
RDEAGPAYGAVRAIGLSGHMHSVALLDDGLHPVRPALLWNDTRGQAQAQRLLQDVPDISR
HHHCCCCHHHHEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHCCCHHH
ATGVRPMASFSAAKLLWIRENDPAAFAATRHVLWAKDYVRLWLTGALATDMSDAAGSQLF
HCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DQQNRTWFAPVRDYLGLGPAILPELRDGTDCAGRLRTATARDLGLPPGIAVATGGGDTPV
HHCCCEEEHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
GAVGLGRVDAGQSYISLGTGAVYVTVQDTYAPDEAVGLHTFAHCVPRRWYQMAAMLNGAS
CEEECCCCCCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
CLAWVAALCRESDLPALLRRVEARGPGPSRILFQPYLRGERTPHDDALARGAFIGLDASC
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECHHHCCCCCCCHHHHHCCEEEECCCCC
DVVDLARAVLEGVAFSLRQGQDLLACQQAISGPVPLIGGGARSPEWARIMATVLGRDLVI
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCCEEC
PRNAEHACALGAARLGMVADGWTMADAMPAFEIAQAIAPDHEAIPLYDAQYAQFERLYPA
CCCCCHHHHHHHHHHCEEECCCHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
IRSIGQGTAAGL
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]