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The map label for this gene is rfbE [H]

Identifier: 162148282

GI number: 162148282

Start: 2592506

End: 2594035

Strand: Direct

Name: rfbE [H]

Synonym: GDI_2499

Alternate gene names: 162148282

Gene position: 2592506-2594035 (Clockwise)

Preceding gene: 162148281

Following gene: 162148283

Centisome position: 65.73

GC content: 62.35

Gene sequence:

>1530_bases
ATGACGTCCTCAGCCCCGCTTGCGCCTCCGCAACCCCGGCATATCCTGTCCAATACGGGTTGGAACATCTTTGGCCGGAT
TCTGCCGATTTTCGTGGCGATCCTGGTGACGCCGAAGCTCATTCACCTGCTGGGCCTGTCACGCTGGGGCGTGTTCACCA
TCGCCCTGACCCTGATCGGCACGTTCGGTATCTTCGATTTCGGCCTGGGCCGGGCATTGACTCGTGCCATCGCCGACCGG
GCGACCGACAGCCCCCGGCAGGACACCGCCGACCTGGTCCTGACCGGAATTCTCGCCCTTGGCGGCATCGGGCTTGTCGC
CGGGTTCGTCGCGGCGGCATCGGCCGGTCTGTGGGTCACGCACGGCCTGAAGATTCCGCACGAACTGGAACAGGAAGTGA
AGCTGTCGTTCTGGGTCTTCTGCGCTACGGCGCCGTTTGTGATGGTCAACGCCGCGATGTGGGGCGTCGTGACGGCGTAT
CAGGATTTCAAATCCATCAACCTGATCAACATGCCGTTTTCGATCATGTATTATGTCGGTCCGCTGCTGATCCTGCTGGT
CTGGAACAATCTGATCGGCGTCATGCTGGTGCTGGCCGTATGCCGGCTATGGATGACCGTCAGCTATGGGCGGCTTTGCT
ATCGGCTGATCCCCCAGTTGCGCAGGGCACGGGCCCGTCCGCGCCTGCTTCTGCCGCTGTTTCGCATCGGCGGGTGGATG
ACCGTGTCCAACGTGGCCTATCCGATCCTGTCCTATATGGACCGGTTCATGATCGCCAGCGTGATTTCGGCGGCCGCGAC
CAGCTTCTACACCACGCCGGCGGATGTCGTGGGGCGCTTCGGCCTGCTGACCAATGCCGTCACGGGTTCGGCCTACCCTG
CCTTTGCGGCGTCATGGCGCAAGGACGTGGCATTGACCGTCAAGCTCTACCAGACGAGCGTGCTGACGGTGGTGGCGCTG
CTCTTCCCGGTCTGCCTGTGCGGCGCGCTGTTCAGCCACGACATCCTGTCGATCTGGATCGACGCCGATTTCGCCGCGCA
CAGCAGCATGATCATGAAGCTGCTCTGCCTCGGCGTCTTTATTTCCGGCATCGATTCCGTGTCCGCCGGCTTCCTGGACG
GTATCGGGCGACCGGACGCCAGTGCCAAACTGTCCATCGGCGAACTGCTGATCTATACGCCCATCCTGCTCCTGTTCCTG
ACGTCCTTCGGCGTGGTCGGGGCGGCCTTCGCGTGGGCGTTGCGCACCACGATCGATTTCATCATCCGGACGGCGATGAG
CATCTACCTCTACAGACCCCTGTCAGGCGCGATCGGCCGCATCCTGCCGGCCGCTCTGTGCGGTTCCGCATCGCTTTGCA
TCGCACTTTTCGACATGCCCCGTCCGGTTGCCATCATGGTCGCCGCGCTGCTCCTGGGGGCGTTTTATGGAATCCTGTGG
TTCGCCTGCCTCGACATTTCCGAGCGAAAGGCTTTCCTTCGCTTTTCGGACATCATCGCGGTCAGGCTTGTGAAGTCGCG
GGCCGTGTAG

Upstream 100 bases:

>100_bases
CGCACGGGATCATCGGCATGGACCATCGGCGTCGCCAGCCCCGCGGGGAATAGCGAACTGCCCCCGCCAGACACGGCTGG
TATCGACACGAGGTGTATTC

Downstream 100 bases:

>100_bases
ACAACATGCGCGCGGAATGGTCCGGCCCTGTTTTCCCGACCGCGTCGGTCTTTTTTTTGACACACTTCAAAACCGGTTAT
CCGGGCGAGCGTTGATACGT

Product: O-antigen transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MTSSAPLAPPQPRHILSNTGWNIFGRILPIFVAILVTPKLIHLLGLSRWGVFTIALTLIGTFGIFDFGLGRALTRAIADR
ATDSPRQDTADLVLTGILALGGIGLVAGFVAAASAGLWVTHGLKIPHELEQEVKLSFWVFCATAPFVMVNAAMWGVVTAY
QDFKSINLINMPFSIMYYVGPLLILLVWNNLIGVMLVLAVCRLWMTVSYGRLCYRLIPQLRRARARPRLLLPLFRIGGWM
TVSNVAYPILSYMDRFMIASVISAAATSFYTTPADVVGRFGLLTNAVTGSAYPAFAASWRKDVALTVKLYQTSVLTVVAL
LFPVCLCGALFSHDILSIWIDADFAAHSSMIMKLLCLGVFISGIDSVSAGFLDGIGRPDASAKLSIGELLIYTPILLLFL
TSFGVVGAAFAWALRTTIDFIIRTAMSIYLYRPLSGAIGRILPAALCGSASLCIALFDMPRPVAIMVAALLLGAFYGILW
FACLDISERKAFLRFSDIIAVRLVKSRAV

Sequences:

>Translated_509_residues
MTSSAPLAPPQPRHILSNTGWNIFGRILPIFVAILVTPKLIHLLGLSRWGVFTIALTLIGTFGIFDFGLGRALTRAIADR
ATDSPRQDTADLVLTGILALGGIGLVAGFVAAASAGLWVTHGLKIPHELEQEVKLSFWVFCATAPFVMVNAAMWGVVTAY
QDFKSINLINMPFSIMYYVGPLLILLVWNNLIGVMLVLAVCRLWMTVSYGRLCYRLIPQLRRARARPRLLLPLFRIGGWM
TVSNVAYPILSYMDRFMIASVISAAATSFYTTPADVVGRFGLLTNAVTGSAYPAFAASWRKDVALTVKLYQTSVLTVVAL
LFPVCLCGALFSHDILSIWIDADFAAHSSMIMKLLCLGVFISGIDSVSAGFLDGIGRPDASAKLSIGELLIYTPILLLFL
TSFGVVGAAFAWALRTTIDFIIRTAMSIYLYRPLSGAIGRILPAALCGSASLCIALFDMPRPVAIMVAALLLGAFYGILW
FACLDISERKAFLRFSDIIAVRLVKSRAV
>Mature_508_residues
TSSAPLAPPQPRHILSNTGWNIFGRILPIFVAILVTPKLIHLLGLSRWGVFTIALTLIGTFGIFDFGLGRALTRAIADRA
TDSPRQDTADLVLTGILALGGIGLVAGFVAAASAGLWVTHGLKIPHELEQEVKLSFWVFCATAPFVMVNAAMWGVVTAYQ
DFKSINLINMPFSIMYYVGPLLILLVWNNLIGVMLVLAVCRLWMTVSYGRLCYRLIPQLRRARARPRLLLPLFRIGGWMT
VSNVAYPILSYMDRFMIASVISAAATSFYTTPADVVGRFGLLTNAVTGSAYPAFAASWRKDVALTVKLYQTSVLTVVALL
FPVCLCGALFSHDILSIWIDADFAAHSSMIMKLLCLGVFISGIDSVSAGFLDGIGRPDASAKLSIGELLIYTPILLLFLT
SFGVVGAAFAWALRTTIDFIIRTAMSIYLYRPLSGAIGRILPAALCGSASLCIALFDMPRPVAIMVAALLLGAFYGILWF
ACLDISERKAFLRFSDIIAVRLVKSRAV

Specific function: Could be an O-antigen transporter [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 55290; Mature: 55159

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSAPLAPPQPRHILSNTGWNIFGRILPIFVAILVTPKLIHLLGLSRWGVFTIALTLIG
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TFGIFDFGLGRALTRAIADRATDSPRQDTADLVLTGILALGGIGLVAGFVAAASAGLWVT
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEE
HGLKIPHELEQEVKLSFWVFCATAPFVMVNAAMWGVVTAYQDFKSINLINMPFSIMYYVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHH
PLLILLVWNNLIGVMLVLAVCRLWMTVSYGRLCYRLIPQLRRARARPRLLLPLFRIGGWM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCH
TVSNVAYPILSYMDRFMIASVISAAATSFYTTPADVVGRFGLLTNAVTGSAYPAFAASWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
KDVALTVKLYQTSVLTVVALLFPVCLCGALFSHDILSIWIDADFAAHSSMIMKLLCLGVF
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH
ISGIDSVSAGFLDGIGRPDASAKLSIGELLIYTPILLLFLTSFGVVGAAFAWALRTTIDF
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIRTAMSIYLYRPLSGAIGRILPAALCGSASLCIALFDMPRPVAIMVAALLLGAFYGILW
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FACLDISERKAFLRFSDIIAVRLVKSRAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSSAPLAPPQPRHILSNTGWNIFGRILPIFVAILVTPKLIHLLGLSRWGVFTIALTLIG
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]