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The map label for this gene is exoF [H]

Identifier: 162148273

GI number: 162148273

Start: 2581407

End: 2582009

Strand: Reverse

Name: exoF [H]

Synonym: GDI_2490

Alternate gene names: 162148273

Gene position: 2582009-2581407 (Counterclockwise)

Preceding gene: 162148274

Following gene: 162148272

Centisome position: 65.46

GC content: 63.35

Gene sequence:

>603_bases
ATGCGATACGGGAGCATATCCAGAATGCCGACGACCAGTCTCACCAGCCGTCGTTCCGCCGTGGTGCTTTTCGGCATGGC
AACCGTTCTGAGCGGATGCGCCGCCGGATCGTCCCTCGATCCGGTGGCGGCATACGATCCCAACCAGTATCGCCTGGGGG
TCGATGACCAGATCCGGGTTCTTACCTACGGTCAGGACCAGCTGACGTCCGATTTCCGGGTCGACAGCAACGGCAAGGTC
GCATTCCCGCTGGCCGGCCACCTGCAGGCGGAAGGACTGACCACCTCCGAATTCGCGGCGGAAATTTCCGCCGCGCTGGA
GAAGGCGCGCATGGTGCGGCAGCCGAACGTCACGGTCGAAGTGACGGCCTATCGCCTGGTCTCGATCCTGGGCGAGGTCG
CACGGCCGGGCCAGTATGCGTATCAGCCTTTCATGACGATGCTGACGGCCGTCGCATCGGCCGGCGGATTCACCTATCGC
GCGCTGGAAGACCGGGCCTACGTCGTCCGGCAGGAAGGCGACCATACGGTGGTGGGGCGCCTTAATCCACAGGACTACGT
CAAGCCCGGGGACGTCCTGAAGATTTATGAACGCCACTTCTGA

Upstream 100 bases:

>100_bases
AACTTTTCCAGCCAGAAGACAGTGGGATACAGGACATTTTCCGACCATACCGTCCTGCTCAGCGCGCATCTGGCGCTTTA
GCCCTTGTGATCTCCAGCCC

Downstream 100 bases:

>100_bases
TGGAAGATACGGGAGGTATATATCGTGACCGTCATGCAGCCCGATCCGTCCGTCGCACCGATGCTGAAGGTGGCCGTCGT
TCATGAGTGGCTGGAACATT

Product: exopolysaccharide production protein exoF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MRYGSISRMPTTSLTSRRSAVVLFGMATVLSGCAAGSSLDPVAAYDPNQYRLGVDDQIRVLTYGQDQLTSDFRVDSNGKV
AFPLAGHLQAEGLTTSEFAAEISAALEKARMVRQPNVTVEVTAYRLVSILGEVARPGQYAYQPFMTMLTAVASAGGFTYR
ALEDRAYVVRQEGDHTVVGRLNPQDYVKPGDVLKIYERHF

Sequences:

>Translated_200_residues
MRYGSISRMPTTSLTSRRSAVVLFGMATVLSGCAAGSSLDPVAAYDPNQYRLGVDDQIRVLTYGQDQLTSDFRVDSNGKV
AFPLAGHLQAEGLTTSEFAAEISAALEKARMVRQPNVTVEVTAYRLVSILGEVARPGQYAYQPFMTMLTAVASAGGFTYR
ALEDRAYVVRQEGDHTVVGRLNPQDYVKPGDVLKIYERHF
>Mature_200_residues
MRYGSISRMPTTSLTSRRSAVVLFGMATVLSGCAAGSSLDPVAAYDPNQYRLGVDDQIRVLTYGQDQLTSDFRVDSNGKV
AFPLAGHLQAEGLTTSEFAAEISAALEKARMVRQPNVTVEVTAYRLVSILGEVARPGQYAYQPFMTMLTAVASAGGFTYR
ALEDRAYVVRQEGDHTVVGRLNPQDYVKPGDVLKIYERHF

Specific function: Involved in succinoglycan (EPS I) synthesis. Needed for the addition of the first sugar (galactose) to the isoprenoid carrier [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787218, Length=172, Percent_Identity=30.2325581395349, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 21879; Mature: 21879

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYGSISRMPTTSLTSRRSAVVLFGMATVLSGCAAGSSLDPVAAYDPNQYRLGVDDQIRV
CCCCCCCCCCCCHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEE
LTYGQDQLTSDFRVDSNGKVAFPLAGHLQAEGLTTSEFAAEISAALEKARMVRQPNVTVE
EEECCHHCCCCEEECCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
VTAYRLVSILGEVARPGQYAYQPFMTMLTAVASAGGFTYRALEDRAYVVRQEGDHTVVGR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCEEEEEC
LNPQDYVKPGDVLKIYERHF
CCHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MRYGSISRMPTTSLTSRRSAVVLFGMATVLSGCAAGSSLDPVAAYDPNQYRLGVDDQIRV
CCCCCCCCCCCCHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEE
LTYGQDQLTSDFRVDSNGKVAFPLAGHLQAEGLTTSEFAAEISAALEKARMVRQPNVTVE
EEECCHHCCCCEEECCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
VTAYRLVSILGEVARPGQYAYQPFMTMLTAVASAGGFTYRALEDRAYVVRQEGDHTVVGR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCEEEEEC
LNPQDYVKPGDVLKIYERHF
CCHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8439670; 11481431 [H]