| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is plcN [H]
Identifier: 162148260
GI number: 162148260
Start: 2569290
End: 2571776
Strand: Reverse
Name: plcN [H]
Synonym: GDI_2477
Alternate gene names: 162148260
Gene position: 2571776-2569290 (Counterclockwise)
Preceding gene: 162148262
Following gene: 162148256
Centisome position: 65.2
GC content: 63.93
Gene sequence:
>2487_bases ATGGCCACACGCAGAGATTTCCTGAAATACGCCCTTCTGTCCGGAGCGGCGGGTGGCGCGTCGTTGCTGTCTGATCCCAT CCGCCGTGCTTTCGCCATTGCACCGAATCCGGGCTCGACCTGGCAGGACGCCGAGCATGTCGTGATCCTGATGCAGGAAA ACCGCTCGTTCGACCACGTCTTCGGCACGCTGCAGGGTGTGCGCGGCTTCAACGACCCGCGTGCGATGCGCCTGGCCAAC GGCAATCCGGTCTTTGCGCAGACCGGCAAGGCGGGGGAGACGTATCTGCCCTGGCGGCTGAACATCCGCGATACGCGCGT GACCTGGATGGGCTCGATCCCCCATTCCCGCGACAGCCAGGTCGATGCCTGGAATGGCGGCGGTCATGACGGATGGATTG ATGCCAAGAAGTCGCATCACAAGGGCTATGATCGCTATCCGCTGACAATGGGCCACTACACGCGCGAGGACCTGCCTTTT TACTACGCGCTGGCCGACGCCTTTACCGTCTGCGACCAGAATTACTGCGGCGCGATGACCAGTACCACGCCCAATCGGCT GCTGTTCATGACCGGAACCGTGCGCGACCGGCAGGATACGTCGTCGAACGTGTATATGCGCAATGGCGAGATCCTGGAGG GCGGCATGACGTGGGCCACCTTTCCGGAACGACTGGAACAGGCCGGAATTTCGTGGAAATACTACCAGAACGAACTGACG CAGACCGGCGGCATGAGCGAGCCGGAACGGGCGTGGCTGGGGAATTTCGGCACGAACGTTCTGGAATGCTTCGATCAGTA TTGCGTTTCGGCCAATCCCGGTTTCGCCGACTGGCTCGAGGCGCGCATCGCCGACTGCCAGGGCCATATCGACCGGCTCA ACAGCCGGGAAATGCTCATTTCCGAAGCGCATGAGGAGCAGTTGGCCGAGGCGCGGATGCTGCTCGATGTCCTGACGCGC CGTCGCGGCCTGGCCGACCAGACGATGGACAGGCTGACACCGCAGGAACGTACGTTGTTCGAGAAGGCGTTCGTCATCAA CAGCGGTGATCCGAATTATCGCAAGCTGGACCGTCTGGCCTTCCATGACGGAGAAAAGACCACTCACATGGATGCGCCGA AGGGCGACCTCCTGCATCAGTTCCGCCAGGATGTGAAAGCGGGCAGCCTGCCTGTCGTATCGTGGCTGTCGGCACCGGGG CATTTTTCCGACCATCCGACCTCGCCGTGGTACGGCGCGTGGTACGTGTCGGAAGTCATGGATATCCTGACCGAAAATCC CGATATCTGGAAAAAGACCATTTTCATCATCACCTATGATGAAAATGACGGTTATTTCGACCATTGCTGTTCCTACGCGG CCCCGGACCCCACGCGCCCGGACACCGGTCGTTCTTCCGCCGGCATCGGACCGGACGGGCTGGAATACACCACCGCGAAG GATGAAACGGACCGAGGCGTGCCCGAACGCCTGGCCCGCAGCGGCCCGATCGGGCTGGGCTTCCGTGTGCCGATGATCGT GGCCTCGCCCTGGAGCCGGGGCGGTTGGGTCAATTCCCAACTGTTCGAACACACCTCGACGTTGCGCTTTCTGGAAGCCT TCATCCAGGGCAAGTTCGGCAGGACGGTCACCGAGACCAATATCTCGCCCTGGCGCCGCGCCATCAGCGGCGACCTGACC TCCTGCTTCCGGCCCTATGACGGTACGGTGCCGACCCTGCCTTTCCTGGACCGCGACGCCCATCTGCATATGATAGAGGA CGCGCGTGACCGGCCGATGCCGGGCGGCTTTCGCGCGCTGGATGATGCGGAGATAGCCGCCCTGCGCGCCGACCCCGCCA CCTTGCGGCGGGTGATCCGGCAGGAGCCCGGCACGCGTCCGGCCTGCGCTCTGCCCTACGAGCCCTATTGCGACGGCGGC ATGTCGAAGGATGGCAGGCTGGTCAGCCTGCGTATGCGCGCCGGTACGACGCTGCATGGCGCACGGTCGGCCGGGCTGCC GTTCAATGTCTATCGTCATGCCGCCGCACCCGATGGCGGCATGCAGGCAGGGACCTACGCCGTCGCGGCCGGGGATACGC TGAGCACGGCATTCGGCGGTTCGGCATTTCTCGACGGGCTCTACGACGTGTCGGTCCATGCGCCGAACGGCTTTTATCGT CGGTACAGGGGGCGGCGGGACGGCGTGCCGTTATGGGCGGAATGCCTCTATCTGCACGGCAAGGATGCGGATCTGCTGGT GCGCGTCACCAATCACGGGACGAAGGCAATCGACATAACCTGTACCCTGGCCGCGCACGGCACGGCGCGGACGCTGCATG TGCCGCCGGGACGGAGCGTCGAGGCGCCGTTCGCCCTGCGTCAGGACGCGATGTGGTACGACGTCACCCTGACCAGCCCA ACCGAGGGCGATCTGCTGTATCAGTTCGCGGGCCGGGTCGAAACCGGGAACCCGGGGCGGACCGATCCGGCCATGGGCGC GGCGTAG
Upstream 100 bases:
>100_bases ATTGTCATAAGGGAAACCGGGAGGTCTGTCGTATAGGCACTGACCTATACGACACTCATCTTATATGCCCCTCATCCGGC GGGTCTTGCGCGAGTAGACA
Downstream 100 bases:
>100_bases GGGACCATCTCCCCGCGCGTCAGCGGGCGGGGCGATCGGTCAGCATGTCCAGGAAGGCGACGATGTCCCGCCGCTCGTCC GGGGTCAGGGGCGGCGCGTC
Product: non-hemolytic phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 828; Mature: 827
Protein sequence:
>828_residues MATRRDFLKYALLSGAAGGASLLSDPIRRAFAIAPNPGSTWQDAEHVVILMQENRSFDHVFGTLQGVRGFNDPRAMRLAN GNPVFAQTGKAGETYLPWRLNIRDTRVTWMGSIPHSRDSQVDAWNGGGHDGWIDAKKSHHKGYDRYPLTMGHYTREDLPF YYALADAFTVCDQNYCGAMTSTTPNRLLFMTGTVRDRQDTSSNVYMRNGEILEGGMTWATFPERLEQAGISWKYYQNELT QTGGMSEPERAWLGNFGTNVLECFDQYCVSANPGFADWLEARIADCQGHIDRLNSREMLISEAHEEQLAEARMLLDVLTR RRGLADQTMDRLTPQERTLFEKAFVINSGDPNYRKLDRLAFHDGEKTTHMDAPKGDLLHQFRQDVKAGSLPVVSWLSAPG HFSDHPTSPWYGAWYVSEVMDILTENPDIWKKTIFIITYDENDGYFDHCCSYAAPDPTRPDTGRSSAGIGPDGLEYTTAK DETDRGVPERLARSGPIGLGFRVPMIVASPWSRGGWVNSQLFEHTSTLRFLEAFIQGKFGRTVTETNISPWRRAISGDLT SCFRPYDGTVPTLPFLDRDAHLHMIEDARDRPMPGGFRALDDAEIAALRADPATLRRVIRQEPGTRPACALPYEPYCDGG MSKDGRLVSLRMRAGTTLHGARSAGLPFNVYRHAAAPDGGMQAGTYAVAAGDTLSTAFGGSAFLDGLYDVSVHAPNGFYR RYRGRRDGVPLWAECLYLHGKDADLLVRVTNHGTKAIDITCTLAAHGTARTLHVPPGRSVEAPFALRQDAMWYDVTLTSP TEGDLLYQFAGRVETGNPGRTDPAMGAA
Sequences:
>Translated_828_residues MATRRDFLKYALLSGAAGGASLLSDPIRRAFAIAPNPGSTWQDAEHVVILMQENRSFDHVFGTLQGVRGFNDPRAMRLAN GNPVFAQTGKAGETYLPWRLNIRDTRVTWMGSIPHSRDSQVDAWNGGGHDGWIDAKKSHHKGYDRYPLTMGHYTREDLPF YYALADAFTVCDQNYCGAMTSTTPNRLLFMTGTVRDRQDTSSNVYMRNGEILEGGMTWATFPERLEQAGISWKYYQNELT QTGGMSEPERAWLGNFGTNVLECFDQYCVSANPGFADWLEARIADCQGHIDRLNSREMLISEAHEEQLAEARMLLDVLTR RRGLADQTMDRLTPQERTLFEKAFVINSGDPNYRKLDRLAFHDGEKTTHMDAPKGDLLHQFRQDVKAGSLPVVSWLSAPG HFSDHPTSPWYGAWYVSEVMDILTENPDIWKKTIFIITYDENDGYFDHCCSYAAPDPTRPDTGRSSAGIGPDGLEYTTAK DETDRGVPERLARSGPIGLGFRVPMIVASPWSRGGWVNSQLFEHTSTLRFLEAFIQGKFGRTVTETNISPWRRAISGDLT SCFRPYDGTVPTLPFLDRDAHLHMIEDARDRPMPGGFRALDDAEIAALRADPATLRRVIRQEPGTRPACALPYEPYCDGG MSKDGRLVSLRMRAGTTLHGARSAGLPFNVYRHAAAPDGGMQAGTYAVAAGDTLSTAFGGSAFLDGLYDVSVHAPNGFYR RYRGRRDGVPLWAECLYLHGKDADLLVRVTNHGTKAIDITCTLAAHGTARTLHVPPGRSVEAPFALRQDAMWYDVTLTSP TEGDLLYQFAGRVETGNPGRTDPAMGAA >Mature_827_residues ATRRDFLKYALLSGAAGGASLLSDPIRRAFAIAPNPGSTWQDAEHVVILMQENRSFDHVFGTLQGVRGFNDPRAMRLANG NPVFAQTGKAGETYLPWRLNIRDTRVTWMGSIPHSRDSQVDAWNGGGHDGWIDAKKSHHKGYDRYPLTMGHYTREDLPFY YALADAFTVCDQNYCGAMTSTTPNRLLFMTGTVRDRQDTSSNVYMRNGEILEGGMTWATFPERLEQAGISWKYYQNELTQ TGGMSEPERAWLGNFGTNVLECFDQYCVSANPGFADWLEARIADCQGHIDRLNSREMLISEAHEEQLAEARMLLDVLTRR RGLADQTMDRLTPQERTLFEKAFVINSGDPNYRKLDRLAFHDGEKTTHMDAPKGDLLHQFRQDVKAGSLPVVSWLSAPGH FSDHPTSPWYGAWYVSEVMDILTENPDIWKKTIFIITYDENDGYFDHCCSYAAPDPTRPDTGRSSAGIGPDGLEYTTAKD ETDRGVPERLARSGPIGLGFRVPMIVASPWSRGGWVNSQLFEHTSTLRFLEAFIQGKFGRTVTETNISPWRRAISGDLTS CFRPYDGTVPTLPFLDRDAHLHMIEDARDRPMPGGFRALDDAEIAALRADPATLRRVIRQEPGTRPACALPYEPYCDGGM SKDGRLVSLRMRAGTTLHGARSAGLPFNVYRHAAAPDGGMQAGTYAVAAGDTLSTAFGGSAFLDGLYDVSVHAPNGFYRR YRGRRDGVPLWAECLYLHGKDADLLVRVTNHGTKAIDITCTLAAHGTARTLHVPPGRSVEAPFALRQDAMWYDVTLTSPT EGDLLYQFAGRVETGNPGRTDPAMGAA
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 91914; Mature: 91783
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRRDFLKYALLSGAAGGASLLSDPIRRAFAIAPNPGSTWQDAEHVVILMQENRSFDHV CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCCHHHH FGTLQGVRGFNDPRAMRLANGNPVFAQTGKAGETYLPWRLNIRDTRVTWMGSIPHSRDSQ HHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCEECCEEEEEEEEEEEEEECCCCCCCCC VDAWNGGGHDGWIDAKKSHHKGYDRYPLTMGHYTREDLPFYYALADAFTVCDQNYCGAMT CCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCCCCCCCEEEHHHHHHHHHCCCCCCCCC STTPNRLLFMTGTVRDRQDTSSNVYMRNGEILEGGMTWATFPERLEQAGISWKYYQNELT CCCCCEEEEEECCCCCCCCCCCCEEEECCEEEECCCCHHHHHHHHHHCCCCEEEHHHHHH QTGGMSEPERAWLGNFGTNVLECFDQYCVSANPGFADWLEARIADCQGHIDRLNSREMLI HCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH SEAHEEQLAEARMLLDVLTRRRGLADQTMDRLTPQERTLFEKAFVINSGDPNYRKLDRLA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHEEEEECCCCCHHHHHHHH FHDGEKTTHMDAPKGDLLHQFRQDVKAGSLPVVSWLSAPGHFSDHPTSPWYGAWYVSEVM HCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHH DILTENPDIWKKTIFIITYDENDGYFDHCCSYAAPDPTRPDTGRSSAGIGPDGLEYTTAK HHHHCCCCCEEEEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCC DETDRGVPERLARSGPIGLGFRVPMIVASPWSRGGWVNSQLFEHTSTLRFLEAFIQGKFG CCCCCCCHHHHHHCCCCCCCEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC RTVTETNISPWRRAISGDLTSCFRPYDGTVPTLPFLDRDAHLHMIEDARDRPMPGGFRAL CEEEECCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC DDAEIAALRADPATLRRVIRQEPGTRPACALPYEPYCDGGMSKDGRLVSLRMRAGTTLHG CCCCEEEEECCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCEECC ARSAGLPFNVYRHAAAPDGGMQAGTYAVAAGDTLSTAFGGSAFLDGLYDVSVHAPNGFYR CCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCHHHHHCCCHHHHCCEEEEEEECCCHHHH RYRGRRDGVPLWAECLYLHGKDADLLVRVTNHGTKAIDITCTLAAHGTARTLHVPPGRSV HHCCCCCCCCHHHHEEEECCCCCEEEEEEECCCCEEEEEEEEEEECCCEEEEECCCCCCC EAPFALRQDAMWYDVTLTSPTEGDLLYQFAGRVETGNPGRTDPAMGAA CCCHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ATRRDFLKYALLSGAAGGASLLSDPIRRAFAIAPNPGSTWQDAEHVVILMQENRSFDHV CCHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCCHHHH FGTLQGVRGFNDPRAMRLANGNPVFAQTGKAGETYLPWRLNIRDTRVTWMGSIPHSRDSQ HHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCEECCEEEEEEEEEEEEEECCCCCCCCC VDAWNGGGHDGWIDAKKSHHKGYDRYPLTMGHYTREDLPFYYALADAFTVCDQNYCGAMT CCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCCCCCCCEEEHHHHHHHHHCCCCCCCCC STTPNRLLFMTGTVRDRQDTSSNVYMRNGEILEGGMTWATFPERLEQAGISWKYYQNELT CCCCCEEEEEECCCCCCCCCCCCEEEECCEEEECCCCHHHHHHHHHHCCCCEEEHHHHHH QTGGMSEPERAWLGNFGTNVLECFDQYCVSANPGFADWLEARIADCQGHIDRLNSREMLI HCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH SEAHEEQLAEARMLLDVLTRRRGLADQTMDRLTPQERTLFEKAFVINSGDPNYRKLDRLA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHEEEEECCCCCHHHHHHHH FHDGEKTTHMDAPKGDLLHQFRQDVKAGSLPVVSWLSAPGHFSDHPTSPWYGAWYVSEVM HCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHH DILTENPDIWKKTIFIITYDENDGYFDHCCSYAAPDPTRPDTGRSSAGIGPDGLEYTTAK HHHHCCCCCEEEEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCC DETDRGVPERLARSGPIGLGFRVPMIVASPWSRGGWVNSQLFEHTSTLRFLEAFIQGKFG CCCCCCCHHHHHHCCCCCCCEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC RTVTETNISPWRRAISGDLTSCFRPYDGTVPTLPFLDRDAHLHMIEDARDRPMPGGFRAL CEEEECCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC DDAEIAALRADPATLRRVIRQEPGTRPACALPYEPYCDGGMSKDGRLVSLRMRAGTTLHG CCCCEEEEECCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCEECC ARSAGLPFNVYRHAAAPDGGMQAGTYAVAAGDTLSTAFGGSAFLDGLYDVSVHAPNGFYR CCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCHHHHHCCCHHHHCCEEEEEEECCCHHHH RYRGRRDGVPLWAECLYLHGKDADLLVRVTNHGTKAIDITCTLAAHGTARTLHVPPGRSV HHCCCCCCCCHHHHEEEECCCCCEEEEEEECCCCEEEEEEEEEEECCCEEEEECCCCCCC EAPFALRQDAMWYDVTLTSPTEGDLLYQFAGRVETGNPGRTDPAMGAA CCCHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120196; 10984043 [H]