| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is plcA
Identifier: 162148258
GI number: 162148258
Start: 2566215
End: 2567909
Strand: Direct
Name: plcA
Synonym: GDI_2475
Alternate gene names: NA
Gene position: 2566215-2567909 (Clockwise)
Preceding gene: 162148257
Following gene: 162148259
Centisome position: 65.06
GC content: 69.73
Gene sequence:
>1695_bases GTGACGGCCGCCCCGGCGACGACCGATCAGGACACACGCGCCGGCATGATTCGCAGAACGCTCCCCTTCCTCGCCATTCC CCTGGCCACGACCCTGCTGGCCGCGTCCGCCTGGGGGGCCGGGCCGCCACCCGCCGTGACCACGACGCCGATCAGGCATC TGGTTGTGGTGTACGACGAGAACGTGTCGTTCGACCATTATTTCGCGACCTACCCGCAGGCGGCGAACCCGCCGGGCGAA CCGGCCTTCGTCGCGGGGGCCGGCACGCCGCCGGCCAACACCCTGGCCGCGACCGGCCTGCTGACCGCCAACCCCAACGC CGGTCCGGCCAATGGCCGGGATGCCAGCCTGCCGTTCCGGCTGGACAGGACGCAGGCCGCCACCGCCGACCAGAACCATG CCTATACCGCCGAACAACTGGCCTATCACGGTGGCAGGGCCGACCTGTTTCCCCGCCATACCGGGCGCGGTACGCCCGGC GGCGTGGGGGCGTTCGCCACCCGGGGACAGGTCATGGGCTATTTCGACGGCAATACCGTCACCGCTCTGTGGCGCTATGC CCAGCGCTTCGCCATGAGCGACGCGGCCTATACCGATACCTACGGCCCCTCCACCCCCGGGGCGCTGGAGGTCGTGTCGG GGCAGACCAACGGCATGCAGATCGTCGCGACCACGCAGAAGCCGGCCACGCGGCAGGCCCATTCCCCCTACATCGCCGAC GGGCAGGGCGGCTGGACGATGATCGGCGACATCGACCCCGCCCATGACGTCTGCTCGGTGCCGAAGGACCAGGTCGTGAT GCGCGGGCGCAATATCGGCGACCTGCTGAACGGCGCCGGGATTTCCTGGGGCGGGTTCATGGGCGGATTCGACCTGACCG TGCGCAACCCGGACGGGTCCACCGGGTGCCAGCGGGCCACGGCCTCGCCCGTCGTGGGGCAGACGATCACCGACTACATT CCCCATCACAACTGGTTCCAGTATTTCCCCAGCACCGCCAACCCGACCCATGCGCGCCCCGGATCGATCGCCGCCATCGG CCATACGCTGGGCGCGGACGGCGTCACGCCGGACCCGGCCAATCACGAATACGACCTGCGCGATTTCTTCGCCGCCGTGC GCGCGGGACACCTGCCGGCGGTCTCGTTCCTGAAACTGCCCGCCTATCAGGACGGCCATGCCGGCTATTCCGACCCGCTG GACGAGCAGCAGGGGATCGTCGACATCGTGAACCTGCTGCAGCAGCGTCCGGAATGGCGTGACACCGCGATCATCATCGC ATGGGACGATTCGGACGGGTGGTACGACCATGCCTTAGTCCGGCCGACCCATTCGTCGGCGGCGCCGGGGGGCGACCAAT CGGCGGACCAGCTGGATGGCACCGACCGATGCGGCACGGCGCCACGTCCGCCGGGCGTCGCGGGCCAGCCGGTCGATGGC CGCTCCGGCCCGGGAACCCGCATTCCGCTGATGGTCGTCTCGCCCTGGGCGCGGGTCAATCATGTCGGCCACGCCCTGGT CACCCAGAGTTCGATCACCCGCTTCATCGAGGATAACTGGCTGGGCGGCGCACGCCTGGGTGGCGGGGCCTTCGACGCCG ACGCCCATGATCTGGGGGACCTGTTCGACTTTACCCGTCCGCCGCGCCTGACGCCGCTGCTGCTGGACCCCCAAACCGGC CAGGAGGCCCGATAG
Upstream 100 bases:
>100_bases TGCAACTGGTCCGCCGCACCTGGGTGGAGGGCCGCGTCGTCATGAAGGGCATCTTCACCTATCCGGGCAGCCGCTATAGC CTGAGCGGCCGTTCGGGGCG
Downstream 100 bases:
>100_bases GGGCCGTGCCGCGCCGATCGGACAGCGGCCGGGTATGGTTCATCCTGCTGCTGCCGGTCCTGTGGCTGTGTTCGCCGGGG GATCGGCCGGCCCGTGCGGC
Product: phospholipase C
Products: NA
Alternate protein names: Phospholipase C; Phosphoesterase; Phospholipase C Phosphocholine-Specific; Non-Hemolytic Phospholipase C; Twin-Arginine Translocation Pathway Signal; Phosphoesterase Family Protein; Phospholipase C Protein; Acid Phosphatase Protein; Acid Phosphatase AcpA; Phosphesterase; Phosphoesterase Family; Phospholipase C Signal Peptide Protein
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MTAAPATTDQDTRAGMIRRTLPFLAIPLATTLLAASAWGAGPPPAVTTTPIRHLVVVYDENVSFDHYFATYPQAANPPGE PAFVAGAGTPPANTLAATGLLTANPNAGPANGRDASLPFRLDRTQAATADQNHAYTAEQLAYHGGRADLFPRHTGRGTPG GVGAFATRGQVMGYFDGNTVTALWRYAQRFAMSDAAYTDTYGPSTPGALEVVSGQTNGMQIVATTQKPATRQAHSPYIAD GQGGWTMIGDIDPAHDVCSVPKDQVVMRGRNIGDLLNGAGISWGGFMGGFDLTVRNPDGSTGCQRATASPVVGQTITDYI PHHNWFQYFPSTANPTHARPGSIAAIGHTLGADGVTPDPANHEYDLRDFFAAVRAGHLPAVSFLKLPAYQDGHAGYSDPL DEQQGIVDIVNLLQQRPEWRDTAIIIAWDDSDGWYDHALVRPTHSSAAPGGDQSADQLDGTDRCGTAPRPPGVAGQPVDG RSGPGTRIPLMVVSPWARVNHVGHALVTQSSITRFIEDNWLGGARLGGGAFDADAHDLGDLFDFTRPPRLTPLLLDPQTG QEAR
Sequences:
>Translated_564_residues MTAAPATTDQDTRAGMIRRTLPFLAIPLATTLLAASAWGAGPPPAVTTTPIRHLVVVYDENVSFDHYFATYPQAANPPGE PAFVAGAGTPPANTLAATGLLTANPNAGPANGRDASLPFRLDRTQAATADQNHAYTAEQLAYHGGRADLFPRHTGRGTPG GVGAFATRGQVMGYFDGNTVTALWRYAQRFAMSDAAYTDTYGPSTPGALEVVSGQTNGMQIVATTQKPATRQAHSPYIAD GQGGWTMIGDIDPAHDVCSVPKDQVVMRGRNIGDLLNGAGISWGGFMGGFDLTVRNPDGSTGCQRATASPVVGQTITDYI PHHNWFQYFPSTANPTHARPGSIAAIGHTLGADGVTPDPANHEYDLRDFFAAVRAGHLPAVSFLKLPAYQDGHAGYSDPL DEQQGIVDIVNLLQQRPEWRDTAIIIAWDDSDGWYDHALVRPTHSSAAPGGDQSADQLDGTDRCGTAPRPPGVAGQPVDG RSGPGTRIPLMVVSPWARVNHVGHALVTQSSITRFIEDNWLGGARLGGGAFDADAHDLGDLFDFTRPPRLTPLLLDPQTG QEAR >Mature_563_residues TAAPATTDQDTRAGMIRRTLPFLAIPLATTLLAASAWGAGPPPAVTTTPIRHLVVVYDENVSFDHYFATYPQAANPPGEP AFVAGAGTPPANTLAATGLLTANPNAGPANGRDASLPFRLDRTQAATADQNHAYTAEQLAYHGGRADLFPRHTGRGTPGG VGAFATRGQVMGYFDGNTVTALWRYAQRFAMSDAAYTDTYGPSTPGALEVVSGQTNGMQIVATTQKPATRQAHSPYIADG QGGWTMIGDIDPAHDVCSVPKDQVVMRGRNIGDLLNGAGISWGGFMGGFDLTVRNPDGSTGCQRATASPVVGQTITDYIP HHNWFQYFPSTANPTHARPGSIAAIGHTLGADGVTPDPANHEYDLRDFFAAVRAGHLPAVSFLKLPAYQDGHAGYSDPLD EQQGIVDIVNLLQQRPEWRDTAIIIAWDDSDGWYDHALVRPTHSSAAPGGDQSADQLDGTDRCGTAPRPPGVAGQPVDGR SGPGTRIPLMVVSPWARVNHVGHALVTQSSITRFIEDNWLGGARLGGGAFDADAHDLGDLFDFTRPPRLTPLLLDPQTGQ EAR
Specific function: Unknown
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59657; Mature: 59525
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPATTDQDTRAGMIRRTLPFLAIPLATTLLAASAWGAGPPPAVTTTPIRHLVVVYDE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEEEEC NVSFDHYFATYPQAANPPGEPAFVAGAGTPPANTLAATGLLTANPNAGPANGRDASLPFR CCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHHHCEEEEECCCCCCCCCCCCCCCEE LDRTQAATADQNHAYTAEQLAYHGGRADLFPRHTGRGTPGGVGAFATRGQVMGYFDGNTV ECCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCHH TALWRYAQRFAMSDAAYTDTYGPSTPGALEVVSGQTNGMQIVATTQKPATRQAHSPYIAD HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHCCCCEEEC GQGGWTMIGDIDPAHDVCSVPKDQVVMRGRNIGDLLNGAGISWGGFMGGFDLTVRNPDGS CCCCEEEEECCCCHHHHHCCCHHHHEECCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCC TGCQRATASPVVGQTITDYIPHHNWFQYFPSTANPTHARPGSIAAIGHTLGADGVTPDPA CCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCEEEECHHCCCCCCCCCCC NHEYDLRDFFAAVRAGHLPAVSFLKLPAYQDGHAGYSDPLDEQQGIVDIVNLLQQRPEWR CCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCC DTAIIIAWDDSDGWYDHALVRPTHSSAAPGGDQSADQLDGTDRCGTAPRPPGVAGQPVDG CEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC RSGPGTRIPLMVVSPWARVNHVGHALVTQSSITRFIEDNWLGGARLGGGAFDADAHDLGD CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LFDFTRPPRLTPLLLDPQTGQEAR HHHCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure TAAPATTDQDTRAGMIRRTLPFLAIPLATTLLAASAWGAGPPPAVTTTPIRHLVVVYDE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEEEEC NVSFDHYFATYPQAANPPGEPAFVAGAGTPPANTLAATGLLTANPNAGPANGRDASLPFR CCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHHHCEEEEECCCCCCCCCCCCCCCEE LDRTQAATADQNHAYTAEQLAYHGGRADLFPRHTGRGTPGGVGAFATRGQVMGYFDGNTV ECCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCHH TALWRYAQRFAMSDAAYTDTYGPSTPGALEVVSGQTNGMQIVATTQKPATRQAHSPYIAD HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHCCCCEEEC GQGGWTMIGDIDPAHDVCSVPKDQVVMRGRNIGDLLNGAGISWGGFMGGFDLTVRNPDGS CCCCEEEEECCCCHHHHHCCCHHHHEECCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCC TGCQRATASPVVGQTITDYIPHHNWFQYFPSTANPTHARPGSIAAIGHTLGADGVTPDPA CCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCEEEECHHCCCCCCCCCCC NHEYDLRDFFAAVRAGHLPAVSFLKLPAYQDGHAGYSDPLDEQQGIVDIVNLLQQRPEWR CCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCC DTAIIIAWDDSDGWYDHALVRPTHSSAAPGGDQSADQLDGTDRCGTAPRPPGVAGQPVDG CEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC RSGPGTRIPLMVVSPWARVNHVGHALVTQSSITRFIEDNWLGGARLGGGAFDADAHDLGD CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LFDFTRPPRLTPLLLDPQTGQEAR HHHCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA