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The map label for this gene is yddE [C]

Identifier: 162148213

GI number: 162148213

Start: 2516214

End: 2517095

Strand: Reverse

Name: yddE [C]

Synonym: GDI_2430

Alternate gene names: 162148213

Gene position: 2517095-2516214 (Counterclockwise)

Preceding gene: 162148216

Following gene: 162148207

Centisome position: 63.82

GC content: 69.73

Gene sequence:

>882_bases
ATGGATGGTATGGGAATCGGGAACAGCAACATGACAGAATTCGCATTTCGCCAGGTCGATGTCTTCGCGGCACGGCCGCT
GAAGGGCAATCCGCTGGCGGTCGTCATCGGGGCTGACGGGCTGAGCGACGGGCAGATGGCCGCCTTCGCGAACTGGATGA
ATCTCAGCGAGACGACGTTCCTGCTGAAGCCCACCCGGCCGGACGCGGATTATCGCGTGCGGATCTTCACGCCGCACCAG
GAACTGCCCTTCGCCGGACATCCCACCCTGGGGTCCTGCCATGTCTGGCTGTCCATGGGCGGCGTGCCGCAGGGCAGGGA
CGTGGTGCAGGACTGCGCCGCCGGGCTGGTGCGCATTCGCCGCGATGGCGACAGGCTGGCCTTCGCGGCCCCCACGTTGC
GCCGTGCCGGACCGGTCGGGGCGGAGGTGCTGGCGGCGGTGACGCGCGGGCTGAACCTGCCGCCCGATGCGGTCGTGGCG
TCGAACTGGGTGGATAACGGCCCCGGCTGGGTGGCCGTCATGCTGCGCGGCCGGGCGGACGTGCTGGCGGTCCGGCCGGA
TTTCCGCGCGCTGGGGGACCTGCAGGTCGGCATCGTGGCCCCGTGGGACAAGGCGGTGGACGGTGACGGCGCGCAGTTCG
AGGTCCGGGGGATCTGCGGCGGCGTGGACGGGTTCGAGGACCCCGTGACCGGCAGCCTGAATGCCGGCCTCGCGATCTGG
ATGATCGGCAGCGGGCTGGCGCCGCCGGCCTATGTCGCCAGCCAGGGGGCGGCGCTGGGCCGTATGGGGCGTGTTACGGT
GACCCGGATCGGGTCCGATATCTGGATCGGCGGCGAAACGGTGACTCGTATCGAAGGGCGGGTGACGATCCCGGATCTAT
GA

Upstream 100 bases:

>100_bases
GGCAGGGCGTGCTGCGCGCGGTGGCGCGCATCCACGCACCGGCGCTGGACCAGGCTCTGCGACAGGACGGCCTGCCGTCC
TGACAGCCGGGCGTAAACGG

Downstream 100 bases:

>100_bases
CGGGCCCGTTCTATTTCGGATCGTGCAGCAGCAGCGCGAAGCCGAACAGGATGAACAGCGCGCCACTGAACCGCTGCACG
CGCCGCCGCCACACGGCGCG

Product: phenazine-like biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MDGMGIGNSNMTEFAFRQVDVFAARPLKGNPLAVVIGADGLSDGQMAAFANWMNLSETTFLLKPTRPDADYRVRIFTPHQ
ELPFAGHPTLGSCHVWLSMGGVPQGRDVVQDCAAGLVRIRRDGDRLAFAAPTLRRAGPVGAEVLAAVTRGLNLPPDAVVA
SNWVDNGPGWVAVMLRGRADVLAVRPDFRALGDLQVGIVAPWDKAVDGDGAQFEVRGICGGVDGFEDPVTGSLNAGLAIW
MIGSGLAPPAYVASQGAALGRMGRVTVTRIGSDIWIGGETVTRIEGRVTIPDL

Sequences:

>Translated_293_residues
MDGMGIGNSNMTEFAFRQVDVFAARPLKGNPLAVVIGADGLSDGQMAAFANWMNLSETTFLLKPTRPDADYRVRIFTPHQ
ELPFAGHPTLGSCHVWLSMGGVPQGRDVVQDCAAGLVRIRRDGDRLAFAAPTLRRAGPVGAEVLAAVTRGLNLPPDAVVA
SNWVDNGPGWVAVMLRGRADVLAVRPDFRALGDLQVGIVAPWDKAVDGDGAQFEVRGICGGVDGFEDPVTGSLNAGLAIW
MIGSGLAPPAYVASQGAALGRMGRVTVTRIGSDIWIGGETVTRIEGRVTIPDL
>Mature_293_residues
MDGMGIGNSNMTEFAFRQVDVFAARPLKGNPLAVVIGADGLSDGQMAAFANWMNLSETTFLLKPTRPDADYRVRIFTPHQ
ELPFAGHPTLGSCHVWLSMGGVPQGRDVVQDCAAGLVRIRRDGDRLAFAAPTLRRAGPVGAEVLAAVTRGLNLPPDAVVA
SNWVDNGPGWVAVMLRGRADVLAVRPDFRALGDLQVGIVAPWDKAVDGDGAQFEVRGICGGVDGFEDPVTGSLNAGLAIW
MIGSGLAPPAYVASQGAALGRMGRVTVTRIGSDIWIGGETVTRIEGRVTIPDL

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=272, Percent_Identity=29.7794117647059, Blast_Score=99, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6321818, Length=294, Percent_Identity=31.2925170068027, Blast_Score=154, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 30867; Mature: 30867

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGMGIGNSNMTEFAFRQVDVFAARPLKGNPLAVVIGADGLSDGQMAAFANWMNLSETTF
CCCCCCCCCCHHHHHHHEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEE
LLKPTRPDADYRVRIFTPHQELPFAGHPTLGSCHVWLSMGGVPQGRDVVQDCAAGLVRIR
EEECCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHEEEE
RDGDRLAFAAPTLRRAGPVGAEVLAAVTRGLNLPPDAVVASNWVDNGPGWVAVMLRGRAD
CCCCEEEEECCHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEECCCE
VLAVRPDFRALGDLQVGIVAPWDKAVDGDGAQFEVRGICGGVDGFEDPVTGSLNAGLAIW
EEEECCCCHHHCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEE
MIGSGLAPPAYVASQGAALGRMGRVTVTRIGSDIWIGGETVTRIEGRVTIPDL
EECCCCCCHHHHHCCCCCCCCCCCEEEEEECCEEEECCCEEEEEECEEECCCC
>Mature Secondary Structure
MDGMGIGNSNMTEFAFRQVDVFAARPLKGNPLAVVIGADGLSDGQMAAFANWMNLSETTF
CCCCCCCCCCHHHHHHHEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEE
LLKPTRPDADYRVRIFTPHQELPFAGHPTLGSCHVWLSMGGVPQGRDVVQDCAAGLVRIR
EEECCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHEEEE
RDGDRLAFAAPTLRRAGPVGAEVLAAVTRGLNLPPDAVVASNWVDNGPGWVAVMLRGRAD
CCCCEEEEECCHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEECCCE
VLAVRPDFRALGDLQVGIVAPWDKAVDGDGAQFEVRGICGGVDGFEDPVTGSLNAGLAIW
EEEECCCCHHHCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEE
MIGSGLAPPAYVASQGAALGRMGRVTVTRIGSDIWIGGETVTRIEGRVTIPDL
EECCCCCCHHHHHCCCCCCCCCCCEEEEEECCEEEECCCEEEEEECEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]