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The map label for this gene is lrp [C]

Identifier: 162148203

GI number: 162148203

Start: 2507248

End: 2507733

Strand: Reverse

Name: lrp [C]

Synonym: GDI_2420

Alternate gene names: 162148203

Gene position: 2507733-2507248 (Counterclockwise)

Preceding gene: 162148206

Following gene: 162148202

Centisome position: 63.58

GC content: 64.4

Gene sequence:

>486_bases
ATGCCGATTTGGTTGCCGAACCATGATGAACACAGACCCGGAATGATCATGGACAAGACGACCGAGGCGATTCTGCGTTA
TCTCGGCCAGGACGGACGCATGACCAACGCGGAACTGGCCCAGCGGGTCGGCCTGTCGCCGTCCGCCTGCCTGCGCCGGG
TGCGACAACTGGAACAGGACGGTGTGATCCGGGGGTATCGTGCGATCATCGACGACAGGGCGCGCGAGGGCGCCACGACG
GTGATCGTCCGCATCAGGCTGGAACGCCAGACCGAGGAATGCCTGCGCCGGTTCGAGGCCCGGGTACGGACCTGCCCGGA
CGTGCGCGAATGCTACCTGATGACCGGCGACGCCGATTACCTGCTGCACGTCGCGGCCCGCGACGCCGCGGATTACGAGC
GTATCCATAACGAGGAACTCTCGCGCCTGCCTGGCGTCGCACAGATCCAGAGCAATTTCACCATCCGGCCGGTGATCCGG
AAATAG

Upstream 100 bases:

>100_bases
CCGACTCTAGGTCAGGATGGCCGGCATTTCCTGCCGAAGGATCGCATGATATGTCGCGGGCGGCCGGACCGCGCATCATC
ATGCGGCGGAATGGCGAAAC

Downstream 100 bases:

>100_bases
GGGCTGCCGCCCGAGGGTAGGCGCCGGCGAAGCGGAATGGAGTGCATGATCGTGTCTGACCGGGCGACCGCCACCGTTCC
CGACAGCCGCCGCGCCGCGC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: ORF-1 [H]

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPIWLPNHDEHRPGMIMDKTTEAILRYLGQDGRMTNAELAQRVGLSPSACLRRVRQLEQDGVIRGYRAIIDDRAREGATT
VIVRIRLERQTEECLRRFEARVRTCPDVRECYLMTGDADYLLHVAARDAADYERIHNEELSRLPGVAQIQSNFTIRPVIR
K

Sequences:

>Translated_161_residues
MPIWLPNHDEHRPGMIMDKTTEAILRYLGQDGRMTNAELAQRVGLSPSACLRRVRQLEQDGVIRGYRAIIDDRAREGATT
VIVRIRLERQTEECLRRFEARVRTCPDVRECYLMTGDADYLLHVAARDAADYERIHNEELSRLPGVAQIQSNFTIRPVIR
K
>Mature_160_residues
PIWLPNHDEHRPGMIMDKTTEAILRYLGQDGRMTNAELAQRVGLSPSACLRRVRQLEQDGVIRGYRAIIDDRAREGATTV
IVRIRLERQTEECLRRFEARVRTCPDVRECYLMTGDADYLLHVAARDAADYERIHNEELSRLPGVAQIQSNFTIRPVIRK

Specific function: Not known, symbiotically active [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=137, Percent_Identity=40.8759124087591, Blast_Score=116, Evalue=8e-28,
Organism=Escherichia coli, GI87081742, Length=143, Percent_Identity=27.972027972028, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18615; Mature: 18483

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIWLPNHDEHRPGMIMDKTTEAILRYLGQDGRMTNAELAQRVGLSPSACLRRVRQLEQD
CCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC
GVIRGYRAIIDDRAREGATTVIVRIRLERQTEECLRRFEARVRTCPDVRECYLMTGDADY
CHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCHHEEEEECCHHH
LLHVAARDAADYERIHNEELSRLPGVAQIQSNFTIRPVIRK
HHHHHHHCHHHHHHHHHHHHHHCCCHHHHHCCCEEECCCCC
>Mature Secondary Structure 
PIWLPNHDEHRPGMIMDKTTEAILRYLGQDGRMTNAELAQRVGLSPSACLRRVRQLEQD
CCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC
GVIRGYRAIIDDRAREGATTVIVRIRLERQTEECLRRFEARVRTCPDVRECYLMTGDADY
CHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCHHEEEEECCHHH
LLHVAARDAADYERIHNEELSRLPGVAQIQSNFTIRPVIRK
HHHHHHHCHHHHHHHHHHHHHHCCCHHHHHCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8190622; 9163424 [H]