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The map label for this gene is ctrB [H]

Identifier: 162148194

GI number: 162148194

Start: 2499440

End: 2500615

Strand: Reverse

Name: ctrB [H]

Synonym: GDI_2411

Alternate gene names: 162148194

Gene position: 2500615-2499440 (Counterclockwise)

Preceding gene: 162148195

Following gene: 162148193

Centisome position: 63.4

GC content: 51.62

Gene sequence:

>1176_bases
ATGGATAGATTTGAAGTTCCGAGCGAGAGAGCAGCGTCAGTGGCCTCGGCGCTCGTCGCGATTCCGCGAGGTTTTAACCG
TGAGCATCGACTCCGGAAAGCCCGGCCATTTCTGTTGGTGGTTGCGTTGCCCACACTCATTGCAGCTATTTATTATTTCC
TGATCGCCGCCCCGCAATATGTTTCGCAAGCTGAATTCGTTGTGCGAGGCGCAGCGTCGCAGCCCGTGGGAATGCTAAGC
AATCTGCTGACGCCGGGGGAAGGGTCGGTCGCTGACGAAGATTCCTATATCGTACAAGATTACCTGACTTCCAGGGACGC
CGCAAAAACAATGCTTGCGACGAAACGGTTGGCGGCAATCTTCAATCGTCCCGAAGGTGACAGATTTGCCCGTTTTCCAA
ATGTCTTTACGGGGTCATCCTTCGAATATTTTTATCAATATTATAAAAATCATGTCACTGTCGAACTTGATACCTCAACC
TCGATCGCGACCCTGCGGGTTCGCACTTTTCGTGCACAGGATTCCCAGGATATCGCAACAGCCCTGCTTGTCTCTGCGGA
GCAGCTTGTTAATCAAATAAATATGCGACAACGCGCTAATATGATTGGTAGTGCGGTGAAAGAGGTTGAAGAAGCCACAG
AACAATTACGTGATGTGGAGGGGCAGTTGGCAGCGTATCGCAATCGCGAAGCACTTCTTGACCCAATCAAGCAGGCGACT
CCGCTGTTGTCGAATATCAATGAGTTGCAGGTGATGTTGACATCTGCGCGGATGCAACTCGCTCAAGTTCAGACCGCGTC
TCCGCGTAGTCCCGCCATCCCCGTCTATCAGCGTAGGATTGCGATCCTGGAAGAACAGATTGCACGGTTGAGTAGGGATG
TTACCGGATCGAAGGCCTCTCTGGTTCCTAAGATTACAGACTATGACGCTTTGACGTTTAAACAGGAACTTATCGAGAAG
CAGTTGACCGCGGCAGCCACGGCACTGGAAACAGCGAAAGCTCAGGCTGACCGTCAGCAGGTCTATCTGGAGCAGATCTC
TCATCCCGATCTGGCAGATTATGCGACCTATCCGAAGCGGATCAGTGACGTGCTGACCGTATTTGCGACATTCTTGGGGC
TTTTCTTAATGGGCAAGTTGATCATCAGCGGTGCGCGAGAGCATCAGATCGTTTGA

Upstream 100 bases:

>100_bases
CCGTGATCCCAAAAAAAAGAAACAGTTCTTTCAACTCATTATGACCCAGATCCTCATTCCCTAGTTGCTTTTCACTTACC
AATGGGGCACCTAATTTCCC

Downstream 100 bases:

>100_bases
GTGTCAAGATGAACGGACCGTCCCTTTTTGTGCTGTTTCGAGTTCAGATGCGGGTGATCGGCGCATTGATGATGCGTGAA
TTGCATACGCGGTTTGGACG

Product: capsule polysaccharide export inner-membrane protein ctrB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MDRFEVPSERAASVASALVAIPRGFNREHRLRKARPFLLVVALPTLIAAIYYFLIAAPQYVSQAEFVVRGAASQPVGMLS
NLLTPGEGSVADEDSYIVQDYLTSRDAAKTMLATKRLAAIFNRPEGDRFARFPNVFTGSSFEYFYQYYKNHVTVELDTST
SIATLRVRTFRAQDSQDIATALLVSAEQLVNQINMRQRANMIGSAVKEVEEATEQLRDVEGQLAAYRNREALLDPIKQAT
PLLSNINELQVMLTSARMQLAQVQTASPRSPAIPVYQRRIAILEEQIARLSRDVTGSKASLVPKITDYDALTFKQELIEK
QLTAAATALETAKAQADRQQVYLEQISHPDLADYATYPKRISDVLTVFATFLGLFLMGKLIISGAREHQIV

Sequences:

>Translated_391_residues
MDRFEVPSERAASVASALVAIPRGFNREHRLRKARPFLLVVALPTLIAAIYYFLIAAPQYVSQAEFVVRGAASQPVGMLS
NLLTPGEGSVADEDSYIVQDYLTSRDAAKTMLATKRLAAIFNRPEGDRFARFPNVFTGSSFEYFYQYYKNHVTVELDTST
SIATLRVRTFRAQDSQDIATALLVSAEQLVNQINMRQRANMIGSAVKEVEEATEQLRDVEGQLAAYRNREALLDPIKQAT
PLLSNINELQVMLTSARMQLAQVQTASPRSPAIPVYQRRIAILEEQIARLSRDVTGSKASLVPKITDYDALTFKQELIEK
QLTAAATALETAKAQADRQQVYLEQISHPDLADYATYPKRISDVLTVFATFLGLFLMGKLIISGAREHQIV
>Mature_391_residues
MDRFEVPSERAASVASALVAIPRGFNREHRLRKARPFLLVVALPTLIAAIYYFLIAAPQYVSQAEFVVRGAASQPVGMLS
NLLTPGEGSVADEDSYIVQDYLTSRDAAKTMLATKRLAAIFNRPEGDRFARFPNVFTGSSFEYFYQYYKNHVTVELDTST
SIATLRVRTFRAQDSQDIATALLVSAEQLVNQINMRQRANMIGSAVKEVEEATEQLRDVEGQLAAYRNREALLDPIKQAT
PLLSNINELQVMLTSARMQLAQVQTASPRSPAIPVYQRRIAILEEQIARLSRDVTGSKASLVPKITDYDALTFKQELIEK
QLTAAATALETAKAQADRQQVYLEQISHPDLADYATYPKRISDVLTVFATFLGLFLMGKLIISGAREHQIV

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrC and CtrD proteins [H]

COG id: COG3524

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexC/CtrB/KpsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005705
- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 43525; Mature: 43525

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRFEVPSERAASVASALVAIPRGFNREHRLRKARPFLLVVALPTLIAAIYYFLIAAPQY
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHH
VSQAEFVVRGAASQPVGMLSNLLTPGEGSVADEDSYIVQDYLTSRDAAKTMLATKRLAAI
HHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FNRPEGDRFARFPNVFTGSSFEYFYQYYKNHVTVELDTSTSIATLRVRTFRAQDSQDIAT
HCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEHHHCCCCHHHHHH
ALLVSAEQLVNQINMRQRANMIGSAVKEVEEATEQLRDVEGQLAAYRNREALLDPIKQAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
PLLSNINELQVMLTSARMQLAQVQTASPRSPAIPVYQRRIAILEEQIARLSRDVTGSKAS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
LVPKITDYDALTFKQELIEKQLTAAATALETAKAQADRQQVYLEQISHPDLADYATYPKR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ISDVLTVFATFLGLFLMGKLIISGAREHQIV
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MDRFEVPSERAASVASALVAIPRGFNREHRLRKARPFLLVVALPTLIAAIYYFLIAAPQY
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHH
VSQAEFVVRGAASQPVGMLSNLLTPGEGSVADEDSYIVQDYLTSRDAAKTMLATKRLAAI
HHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FNRPEGDRFARFPNVFTGSSFEYFYQYYKNHVTVELDTSTSIATLRVRTFRAQDSQDIAT
HCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEHHHCCCCHHHHHH
ALLVSAEQLVNQINMRQRANMIGSAVKEVEEATEQLRDVEGQLAAYRNREALLDPIKQAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
PLLSNINELQVMLTSARMQLAQVQTASPRSPAIPVYQRRIAILEEQIARLSRDVTGSKAS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
LVPKITDYDALTFKQELIEKQLTAAATALETAKAQADRQQVYLEQISHPDLADYATYPKR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ISDVLTVFATFLGLFLMGKLIISGAREHQIV
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]