| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is 162148188
Identifier: 162148188
GI number: 162148188
Start: 2493571
End: 2496489
Strand: Reverse
Name: 162148188
Synonym: GDI_2405
Alternate gene names: NA
Gene position: 2496489-2493571 (Counterclockwise)
Preceding gene: 162148189
Following gene: 162148187
Centisome position: 63.3
GC content: 46.83
Gene sequence:
>2919_bases GTGGAAATGATCGTAAAGCGAATGGCGCTGAAGGCGGGATCTGCAGCAGGCTGGACAAGAGAGGGAGATGCTGCCCGCGA CAGGGGTGACTGGCCTGCGTCCGCGGCTGCTTACGAAAAGGCGCTCGAACTGCAGCCTCTGTTAGGACATATCTGGATTC AATATGGGCACGCTCTGAAGGAAAGTGGGGAGTTGGACAAGGCCCACATCGCCTATCGTCGGGGAGTTGAGATTCTGCCG ACTTCTTCAGATGCTTATATTCAACTAGGACACATTCTGAAATTAAAGAATGACCCATTGCGCGCAACTATTGCCTATCG ACAAGCAGTGATTCTTGACCCGGATAACGATAATGCTCTCAGGGAACTTCGAACTGCCGAATGGACTGACGCTGAAATTA TGGAAACCACATGTTCTCAGGAGGTGGGCAGGAAATGTCCTCCAACCCGTTCTGATTTTACACGATTAGTATCAAAGTCG TTTATAAAATTTGATGCTCAAAATTACCGCGATCAGTTTCCAGATGTATCATTTTTGATTGATTTGGGGGTTATATATTC ACCTGAGCAGCATTATCTGCATTACGGATATAGGGGGGGGAGGGATATTCTTCTTTCCCTAGAGCAAAAAGCTCCGTCGC GGGCGTTTGTCCTGTGTCCAAGTTTTTTCAAGCGATGTGGTATCGGCGAACATGCTCGTTATCTGGCGCATAGTATCGAG GCATCAGGATTAGAAACGCATCGAATCCGAACGACCGTTGAGTTGGAGCAATTTTCTCCGGCAATTCTTCAAGATGCGAT TCTTATTATCAATCATGGTCCAGGCTTGTTTGATGCATATAATCCTGAACTCTCCGAGGGTGAGAGTGTAAGCGACGTTA TTTCGAAATCAATCGATGTATTCGATAAATATAATACGCGCACCGTTGTGTTGATGCATTCCCTGCTCGACCGAGACAAC AGAGAGATGTTTCCGCGGCAGCAGCTTTGGCTGGAAAGTCCGTTGCCGATTGTCACGACTATCCAAGCAGCGGCGACATT TTTTAATCTCATCCATATCGAGCACGGAATGCAACCTGTGGAGGTGCCTCCCGCGGTGCCGAAAGCTAAAAATAGCCGAG ATTATCCGACTATCGGATTTTTTGGTTTTTTCCAGTGGGGTGGAAAGAATTTCGACGCTCTCTTCAATGCGGTGGAACGG CTGAAAGGTAAATTGGTTGGTTCGGTTGCCACTGGGAAAGAGTATGATATTGAAAAATTGCGGGAAACTTTAAAAGAACG AGGTATTAATTGCGATCTCGGAACTGGATGGGTTGACGACTCCGAGTTGACGAGACGGCTATCGGAAGCTGATTATTTTT ATCTTCCGCAGTACGATTATGATCATTGGAACAATAGCGGTACGGCGCGCTTGGTGATGAACTTTCGCCTCCCGGTCGTT CTCCCGCCGCATAATCCGTTTCTTGATTTGCGTAAATATGCCATTTTTGCGGATGAGGCTGATGTCCCCGCGATTATGTC GTGGATGCGTATTCCGAAAATTTACGAGGATGCGGCGACTCGCTCCGAGCGTTATGCAAAGGCGCATCCGATGCTCGTGG AAATGCCGAAACTGGCGCATGGTCTGAAACAGGTGGTGGCCGCAAGCGGGGCGGATGTTTTTCTGGACCCCAATCTTTTT AGCGTGTGGTCGCTGCTGAGTGTTTCGTCAGACGTGTTCCTGAAGCGTGTCTCTTTTCGGACGTCTGATGATGATCTGGA TTTTCAATCGACCGATCCAGATAGTGATGAACGCCTGGAGCAGATCTTGGCATTGCGCGCGCATTATCCACATCTATTCG GTTTGATTTTTAATGTCGTGCAACCTGTTCATTACTGGCGAGATCATTATGATCTTGATTCATTTTTCTTCCCGACATGG GGAGAAACGATAACAAACGTCTGTCGTGTTATGTATAAAAATGAACCAAATTTTTCATATGTTAATAAAATTCTCAGTTT GCTGGGTGTCGAACTACAAGGGATAAATGACGCTATTTCGCCCAGCCAGACACTTTCCCTGCTTCGCTGGCATATGTTCC GAGAGCCCAATTTGGATTTTGCTCCTTGCGTGCAAATTTATCATGCGGGCAGTCCGTTGGCACTCGACAACTTGAGTTCG TCTGATCTTCTCGCCACTTTTGAGGAGACCACGACTCGTCGACTTGCACTTTGTAAAAAGGTTCATATTTCCAATGAACC TCTGTTCTGTCCTGAAAATGACCGGAATTTATTGAAGTTATTAACACTTCCGACTGAATGGGTGGATCGGGCTCTGACGG AGTGTGCCCGTTCGGCGGGGAAAGATTTTGTATTCGAAGGGGTTGGTGAAATACAGGACATCTACCTTAGATATAATAAG TTGCTATATTCTCTTAGTGGTAAGGATGTTAGAGTGTCTGACATTGGTCTGCTTGATAGGCCAATTGTTGATTCTGTAAA TTTCCACCGTTTTGTTTATTCTATTGCAGATTTTTGGCATTTTGACGGTGACGGATTGATTTTTCAGGTGGTACGCTGTT TGCTAAAGCGGGATCCTTCTCCTCGCGAGATGTTTGCGCTAAGCCAAATTTATGATCAAAAAGGGCGTCTGGCGGTCATT CAATGTGTTGCTGCCTATCCCTATATAAGCACGCGTGTTGTCGATTTGAACGCGGATCATCTCGTGATGAAACTTGATGA GATGCGCAAGGCTACCGAAGTTTTGGTCGGGCAGGTTCGTTCACCTTATGCTGGTGGTTGGGATTTGCGGAACAAATATC TTGAAGATCGGCGGAACTTTGACCGGGCTTGGCTGCGAATGAAGAATATTAAAGACTTGTGGTGGTCTCAGTCCGGTGGC AGCATAGACAGCATTGTTTCCCTCAACGTCCACTCCTAA
Upstream 100 bases:
>100_bases GGTGCTGTTTTTTTTGCGAAACCGTGGCGGCATTGTGGACTGATATTTTTGATTAGTCTATAAATATTCTGGAACGTGCG TAAATAGGTAAGGTTTATAC
Downstream 100 bases:
>100_bases GTGCCGAAAATAGTTATAATAATTTATCGATTAGATGGCGGCGGTCTCATTTGCGAGATTGCCGCCGATATAGACGACAC AGACACCGTCCATTCGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; O-Linked GlcNAc Transferase Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Radical SAM Domain Protein
Number of amino acids: Translated: 972; Mature: 972
Protein sequence:
>972_residues MEMIVKRMALKAGSAAGWTREGDAARDRGDWPASAAAYEKALELQPLLGHIWIQYGHALKESGELDKAHIAYRRGVEILP TSSDAYIQLGHILKLKNDPLRATIAYRQAVILDPDNDNALRELRTAEWTDAEIMETTCSQEVGRKCPPTRSDFTRLVSKS FIKFDAQNYRDQFPDVSFLIDLGVIYSPEQHYLHYGYRGGRDILLSLEQKAPSRAFVLCPSFFKRCGIGEHARYLAHSIE ASGLETHRIRTTVELEQFSPAILQDAILIINHGPGLFDAYNPELSEGESVSDVISKSIDVFDKYNTRTVVLMHSLLDRDN REMFPRQQLWLESPLPIVTTIQAAATFFNLIHIEHGMQPVEVPPAVPKAKNSRDYPTIGFFGFFQWGGKNFDALFNAVER LKGKLVGSVATGKEYDIEKLRETLKERGINCDLGTGWVDDSELTRRLSEADYFYLPQYDYDHWNNSGTARLVMNFRLPVV LPPHNPFLDLRKYAIFADEADVPAIMSWMRIPKIYEDAATRSERYAKAHPMLVEMPKLAHGLKQVVAASGADVFLDPNLF SVWSLLSVSSDVFLKRVSFRTSDDDLDFQSTDPDSDERLEQILALRAHYPHLFGLIFNVVQPVHYWRDHYDLDSFFFPTW GETITNVCRVMYKNEPNFSYVNKILSLLGVELQGINDAISPSQTLSLLRWHMFREPNLDFAPCVQIYHAGSPLALDNLSS SDLLATFEETTTRRLALCKKVHISNEPLFCPENDRNLLKLLTLPTEWVDRALTECARSAGKDFVFEGVGEIQDIYLRYNK LLYSLSGKDVRVSDIGLLDRPIVDSVNFHRFVYSIADFWHFDGDGLIFQVVRCLLKRDPSPREMFALSQIYDQKGRLAVI QCVAAYPYISTRVVDLNADHLVMKLDEMRKATEVLVGQVRSPYAGGWDLRNKYLEDRRNFDRAWLRMKNIKDLWWSQSGG SIDSIVSLNVHS
Sequences:
>Translated_972_residues MEMIVKRMALKAGSAAGWTREGDAARDRGDWPASAAAYEKALELQPLLGHIWIQYGHALKESGELDKAHIAYRRGVEILP TSSDAYIQLGHILKLKNDPLRATIAYRQAVILDPDNDNALRELRTAEWTDAEIMETTCSQEVGRKCPPTRSDFTRLVSKS FIKFDAQNYRDQFPDVSFLIDLGVIYSPEQHYLHYGYRGGRDILLSLEQKAPSRAFVLCPSFFKRCGIGEHARYLAHSIE ASGLETHRIRTTVELEQFSPAILQDAILIINHGPGLFDAYNPELSEGESVSDVISKSIDVFDKYNTRTVVLMHSLLDRDN REMFPRQQLWLESPLPIVTTIQAAATFFNLIHIEHGMQPVEVPPAVPKAKNSRDYPTIGFFGFFQWGGKNFDALFNAVER LKGKLVGSVATGKEYDIEKLRETLKERGINCDLGTGWVDDSELTRRLSEADYFYLPQYDYDHWNNSGTARLVMNFRLPVV LPPHNPFLDLRKYAIFADEADVPAIMSWMRIPKIYEDAATRSERYAKAHPMLVEMPKLAHGLKQVVAASGADVFLDPNLF SVWSLLSVSSDVFLKRVSFRTSDDDLDFQSTDPDSDERLEQILALRAHYPHLFGLIFNVVQPVHYWRDHYDLDSFFFPTW GETITNVCRVMYKNEPNFSYVNKILSLLGVELQGINDAISPSQTLSLLRWHMFREPNLDFAPCVQIYHAGSPLALDNLSS SDLLATFEETTTRRLALCKKVHISNEPLFCPENDRNLLKLLTLPTEWVDRALTECARSAGKDFVFEGVGEIQDIYLRYNK LLYSLSGKDVRVSDIGLLDRPIVDSVNFHRFVYSIADFWHFDGDGLIFQVVRCLLKRDPSPREMFALSQIYDQKGRLAVI QCVAAYPYISTRVVDLNADHLVMKLDEMRKATEVLVGQVRSPYAGGWDLRNKYLEDRRNFDRAWLRMKNIKDLWWSQSGG SIDSIVSLNVHS >Mature_972_residues MEMIVKRMALKAGSAAGWTREGDAARDRGDWPASAAAYEKALELQPLLGHIWIQYGHALKESGELDKAHIAYRRGVEILP TSSDAYIQLGHILKLKNDPLRATIAYRQAVILDPDNDNALRELRTAEWTDAEIMETTCSQEVGRKCPPTRSDFTRLVSKS FIKFDAQNYRDQFPDVSFLIDLGVIYSPEQHYLHYGYRGGRDILLSLEQKAPSRAFVLCPSFFKRCGIGEHARYLAHSIE ASGLETHRIRTTVELEQFSPAILQDAILIINHGPGLFDAYNPELSEGESVSDVISKSIDVFDKYNTRTVVLMHSLLDRDN REMFPRQQLWLESPLPIVTTIQAAATFFNLIHIEHGMQPVEVPPAVPKAKNSRDYPTIGFFGFFQWGGKNFDALFNAVER LKGKLVGSVATGKEYDIEKLRETLKERGINCDLGTGWVDDSELTRRLSEADYFYLPQYDYDHWNNSGTARLVMNFRLPVV LPPHNPFLDLRKYAIFADEADVPAIMSWMRIPKIYEDAATRSERYAKAHPMLVEMPKLAHGLKQVVAASGADVFLDPNLF SVWSLLSVSSDVFLKRVSFRTSDDDLDFQSTDPDSDERLEQILALRAHYPHLFGLIFNVVQPVHYWRDHYDLDSFFFPTW GETITNVCRVMYKNEPNFSYVNKILSLLGVELQGINDAISPSQTLSLLRWHMFREPNLDFAPCVQIYHAGSPLALDNLSS SDLLATFEETTTRRLALCKKVHISNEPLFCPENDRNLLKLLTLPTEWVDRALTECARSAGKDFVFEGVGEIQDIYLRYNK LLYSLSGKDVRVSDIGLLDRPIVDSVNFHRFVYSIADFWHFDGDGLIFQVVRCLLKRDPSPREMFALSQIYDQKGRLAVI QCVAAYPYISTRVVDLNADHLVMKLDEMRKATEVLVGQVRSPYAGGWDLRNKYLEDRRNFDRAWLRMKNIKDLWWSQSGG SIDSIVSLNVHS
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 110900; Mature: 110900
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMIVKRMALKAGSAAGWTREGDAARDRGDWPASAAAYEKALELQPLLGHIWIQYGHALK CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ESGELDKAHIAYRRGVEILPTSSDAYIQLGHILKLKNDPLRATIAYRQAVILDPDNDNAL HCCCCCHHHHHHHCCCEEEECCCCCEEEECEEEEECCCCCEEEEEECEEEEECCCCCHHH RELRTAEWTDAEIMETTCSQEVGRKCPPTRSDFTRLVSKSFIKFDAQNYRDQFPDVSFLI HHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEE DLGVIYSPEQHYLHYGYRGGRDILLSLEQKAPSRAFVLCPSFFKRCGIGEHARYLAHSIE EECEEECCCHHEEECCCCCCCEEEEEECCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHH ASGLETHRIRTTVELEQFSPAILQDAILIINHGPGLFDAYNPELSEGESVSDVISKSIDV CCCCCHHHEEEEEEHHHCCHHHHHCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH FDKYNTRTVVLMHSLLDRDNREMFPRQQLWLESPLPIVTTIQAAATFFNLIHIEHGMQPV HHCCCCCHHHHHHHHHCCCCHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC EVPPAVPKAKNSRDYPTIGFFGFFQWGGKNFDALFNAVERLKGKLVGSVATGKEYDIEKL CCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RETLKERGINCDLGTGWVDDSELTRRLSEADYFYLPQYDYDHWNNSGTARLVMNFRLPVV HHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEECCCEE LPPHNPFLDLRKYAIFADEADVPAIMSWMRIPKIYEDAATRSERYAKAHPMLVEMPKLAH ECCCCCHHHHHHHEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHEECHHHHH GLKQVVAASGADVFLDPNLFSVWSLLSVSSDVFLKRVSFRTSDDDLDFQSTDPDSDERLE HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH QILALRAHYPHLFGLIFNVVQPVHYWRDHYDLDSFFFPTWGETITNVCRVMYKNEPNFSY HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH VNKILSLLGVELQGINDAISPSQTLSLLRWHMFREPNLDFAPCVQIYHAGSPLALDNLSS HHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEECCCCC SDLLATFEETTTRRLALCKKVHISNEPLFCPENDRNLLKLLTLPTEWVDRALTECARSAG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHEEECCHHHHHHHHHHHHHHCC KDFVFEGVGEIQDIYLRYNKLLYSLSGKDVRVSDIGLLDRPIVDSVNFHRFVYSIADFWH CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC FDGDGLIFQVVRCLLKRDPSPREMFALSQIYDQKGRLAVIQCVAAYPYISTRVVDLNADH CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHCCCCEEEEEECCCCH LVMKLDEMRKATEVLVGQVRSPYAGGWDLRNKYLEDRRNFDRAWLRMKNIKDLWWSQSGG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCC SIDSIVSLNVHS CEEEEEEEEECC >Mature Secondary Structure MEMIVKRMALKAGSAAGWTREGDAARDRGDWPASAAAYEKALELQPLLGHIWIQYGHALK CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ESGELDKAHIAYRRGVEILPTSSDAYIQLGHILKLKNDPLRATIAYRQAVILDPDNDNAL HCCCCCHHHHHHHCCCEEEECCCCCEEEECEEEEECCCCCEEEEEECEEEEECCCCCHHH RELRTAEWTDAEIMETTCSQEVGRKCPPTRSDFTRLVSKSFIKFDAQNYRDQFPDVSFLI HHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEE DLGVIYSPEQHYLHYGYRGGRDILLSLEQKAPSRAFVLCPSFFKRCGIGEHARYLAHSIE EECEEECCCHHEEECCCCCCCEEEEEECCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHH ASGLETHRIRTTVELEQFSPAILQDAILIINHGPGLFDAYNPELSEGESVSDVISKSIDV CCCCCHHHEEEEEEHHHCCHHHHHCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH FDKYNTRTVVLMHSLLDRDNREMFPRQQLWLESPLPIVTTIQAAATFFNLIHIEHGMQPV HHCCCCCHHHHHHHHHCCCCHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC EVPPAVPKAKNSRDYPTIGFFGFFQWGGKNFDALFNAVERLKGKLVGSVATGKEYDIEKL CCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RETLKERGINCDLGTGWVDDSELTRRLSEADYFYLPQYDYDHWNNSGTARLVMNFRLPVV HHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEECCCEE LPPHNPFLDLRKYAIFADEADVPAIMSWMRIPKIYEDAATRSERYAKAHPMLVEMPKLAH ECCCCCHHHHHHHEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHEECHHHHH GLKQVVAASGADVFLDPNLFSVWSLLSVSSDVFLKRVSFRTSDDDLDFQSTDPDSDERLE HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH QILALRAHYPHLFGLIFNVVQPVHYWRDHYDLDSFFFPTWGETITNVCRVMYKNEPNFSY HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH VNKILSLLGVELQGINDAISPSQTLSLLRWHMFREPNLDFAPCVQIYHAGSPLALDNLSS HHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEECCCCC SDLLATFEETTTRRLALCKKVHISNEPLFCPENDRNLLKLLTLPTEWVDRALTECARSAG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHEEECCHHHHHHHHHHHHHHCC KDFVFEGVGEIQDIYLRYNKLLYSLSGKDVRVSDIGLLDRPIVDSVNFHRFVYSIADFWH CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC FDGDGLIFQVVRCLLKRDPSPREMFALSQIYDQKGRLAVIQCVAAYPYISTRVVDLNADH CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHCCCCEEEEEECCCCH LVMKLDEMRKATEVLVGQVRSPYAGGWDLRNKYLEDRRNFDRAWLRMKNIKDLWWSQSGG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCC SIDSIVSLNVHS CEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA