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The map label for this gene is kpsC [H]

Identifier: 162148183

GI number: 162148183

Start: 2485577

End: 2487232

Strand: Reverse

Name: kpsC [H]

Synonym: GDI_2400

Alternate gene names: 162148183

Gene position: 2487232-2485577 (Counterclockwise)

Preceding gene: 162148184

Following gene: 162148182

Centisome position: 63.06

GC content: 67.75

Gene sequence:

>1656_bases
TTGTTGCGTCCTCCACCCTTTCACCGGGTCATGCCGGTTCTGGCCGTGAAGCAGGATGGTGCTACGTCGGAACGGGTCTG
CGGTTCCGGGCGGGAACTGGACGGTCTGGCCGCGCGGATCGTGCGGCAGCGCGTCGGCGGATGTTTCTGGGGGCGGCCTG
CCGGAGCACGGCGGCCGGTCGTCGTATATGGCCCGGGATGGGGGGCCGGTTCCCGTCCGATTCGTTCGATCCTGCGGGAT
GTCTTCGCCGCGCATGCCGCGCAGGACGTGGTTCTGGTCTGCGGGCGGCGCCAGGGCGCACTGGCCGCATGGGGGCGCCG
CCATGGGCTGGCGGTAGCCCCGGCCGATACCGATCCGCACGATCTTCTTGACGGTGCGACCTGTGTCTATGCCCACCCGA
CGACCGATCTGGCCCGGCTGGCCGTTCTGCGCGGCCTTGCGGTGAAGGGAATCCCGGATGGGATGAGCCTGGCCGGAATC
ATGACCGACATTGCGAATCGCACTGATTATATCGATCCGTTTACCGGTGCGCCGATGGCATGCGCCGATGCGATTACGCT
TCTGGCGGACTGGCGGCGGACGATCATGGCCAATCGCAGGATCGGCGCATGCCTGGGAATGTCGCGATGGAAGCGGCGCA
GGATTGCCGATTTCCTGGCGACGGCGCCCGGCCATCCACCCTTTCGCCCGGATATCCGCGCCGGGCAGCGCGGCGCGGTG
GCGGTGTGGGCAACCCGGCAGCCACCGGGACTGGAAGATGCGGCGCGCCGGGTGGGTATTCCGTTGTGGCGGGTGGAGGA
CGGCTTCATCCGCTCCATCGGCCTGGGCAGCGCGTTGACCCCGCCTTCGTCGATTACGATCGACACGCGCGGTATGTATT
ACGACCCGGCGCAGGAGAGCGACCTGGAACATATTCTGGCCACATCCCCCTTTGATGATGTGTTGCGCGCCCGCGCCAGG
AAATTGATGGATGCGTTGGTGCTGCTTGGTATTTCCAAATATGGCCCCGGTCGGGCCTCTGCCCTGCCTGCGTCCTGGGA
TGCCGCGGGGCGGCGCACGATCCTTGTGCCCGGCCAGGTCGCGGACGACCAGTCGGTGCGCCGTGGGGGCGGGCGGATCG
CAGGCAACCTGGAACTGCTGCAGGCGGTCCGGGAGAGCAACCCGGACGCCTTCATCCTCTATCGGCCGCATCCCGATGTC
GAAGCGACCCATCGGGTGGGGCATGTGGACGACGTGCTTGTCCTGCGACTGGCCGATCGGATCGATCGCGGCGGGGCGAT
CACCGATACGATCGCCCGCGTGGACGAGGTTCATACCCTGACCTCGCTTGCCGGATTCGAGGCCCTGATGCGGGGACGGC
GCGTCGTGACCTATGGCGCGCCGTTCTATGCGGGATGGGGGCTGACGGTCGATCGGGGGGACGTTCCCCCCCGCCGGACG
CGGCGCCTGTCCCTGGAGGAACTGGTCGCGGGGGTCCTGATCCTGTTTCCGCGTTATCTGGACCCGGTGACCCGGCTGCC
ATGCAGCCCGGAAGTCCTGATCGAGCGCCTGCAGGACGCCCGGGTCTGGCGGCCTACCTGGTGGATGCGGGCGTTGGCCT
TGCAGACAGGCTGGCGCAAGGCTGTCGCGCGCTATCGTGCGGCGGTGGCGTCATGA

Upstream 100 bases:

>100_bases
GTTTGCTATAACCCCATAAATTCAGACGATTTTGAGAGGATATAACATCGCGAATGCCCGGGAATGACCAGCGATGCGGA
TAACGGGTGATACAACCGCC

Downstream 100 bases:

>100_bases
TGTCCAACCCGATCCTGATGGATATTTCCCGGCTGCTGTCGCGTGCCGGCAGCGCGGTACCGACGGGAATCGATCGTGTC
GAGCTGGAATACGCGCTGTA

Product: capsule polysaccharide export protein kpsC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MLRPPPFHRVMPVLAVKQDGATSERVCGSGRELDGLAARIVRQRVGGCFWGRPAGARRPVVVYGPGWGAGSRPIRSILRD
VFAAHAAQDVVLVCGRRQGALAAWGRRHGLAVAPADTDPHDLLDGATCVYAHPTTDLARLAVLRGLAVKGIPDGMSLAGI
MTDIANRTDYIDPFTGAPMACADAITLLADWRRTIMANRRIGACLGMSRWKRRRIADFLATAPGHPPFRPDIRAGQRGAV
AVWATRQPPGLEDAARRVGIPLWRVEDGFIRSIGLGSALTPPSSITIDTRGMYYDPAQESDLEHILATSPFDDVLRARAR
KLMDALVLLGISKYGPGRASALPASWDAAGRRTILVPGQVADDQSVRRGGGRIAGNLELLQAVRESNPDAFILYRPHPDV
EATHRVGHVDDVLVLRLADRIDRGGAITDTIARVDEVHTLTSLAGFEALMRGRRVVTYGAPFYAGWGLTVDRGDVPPRRT
RRLSLEELVAGVLILFPRYLDPVTRLPCSPEVLIERLQDARVWRPTWWMRALALQTGWRKAVARYRAAVAS

Sequences:

>Translated_551_residues
MLRPPPFHRVMPVLAVKQDGATSERVCGSGRELDGLAARIVRQRVGGCFWGRPAGARRPVVVYGPGWGAGSRPIRSILRD
VFAAHAAQDVVLVCGRRQGALAAWGRRHGLAVAPADTDPHDLLDGATCVYAHPTTDLARLAVLRGLAVKGIPDGMSLAGI
MTDIANRTDYIDPFTGAPMACADAITLLADWRRTIMANRRIGACLGMSRWKRRRIADFLATAPGHPPFRPDIRAGQRGAV
AVWATRQPPGLEDAARRVGIPLWRVEDGFIRSIGLGSALTPPSSITIDTRGMYYDPAQESDLEHILATSPFDDVLRARAR
KLMDALVLLGISKYGPGRASALPASWDAAGRRTILVPGQVADDQSVRRGGGRIAGNLELLQAVRESNPDAFILYRPHPDV
EATHRVGHVDDVLVLRLADRIDRGGAITDTIARVDEVHTLTSLAGFEALMRGRRVVTYGAPFYAGWGLTVDRGDVPPRRT
RRLSLEELVAGVLILFPRYLDPVTRLPCSPEVLIERLQDARVWRPTWWMRALALQTGWRKAVARYRAAVAS
>Mature_551_residues
MLRPPPFHRVMPVLAVKQDGATSERVCGSGRELDGLAARIVRQRVGGCFWGRPAGARRPVVVYGPGWGAGSRPIRSILRD
VFAAHAAQDVVLVCGRRQGALAAWGRRHGLAVAPADTDPHDLLDGATCVYAHPTTDLARLAVLRGLAVKGIPDGMSLAGI
MTDIANRTDYIDPFTGAPMACADAITLLADWRRTIMANRRIGACLGMSRWKRRRIADFLATAPGHPPFRPDIRAGQRGAV
AVWATRQPPGLEDAARRVGIPLWRVEDGFIRSIGLGSALTPPSSITIDTRGMYYDPAQESDLEHILATSPFDDVLRARAR
KLMDALVLLGISKYGPGRASALPASWDAAGRRTILVPGQVADDQSVRRGGGRIAGNLELLQAVRESNPDAFILYRPHPDV
EATHRVGHVDDVLVLRLADRIDRGGAITDTIARVDEVHTLTSLAGFEALMRGRRVVTYGAPFYAGWGLTVDRGDVPPRRT
RRLSLEELVAGVLILFPRYLDPVTRLPCSPEVLIERLQDARVWRPTWWMRALALQTGWRKAVARYRAAVAS

Specific function: Unknown

COG id: COG3563

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti lipopolysaccharide processing protein lpsZ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 60126; Mature: 60126

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPPPFHRVMPVLAVKQDGATSERVCGSGRELDGLAARIVRQRVGGCFWGRPAGARRPV
CCCCCCHHHHHHHHEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCE
VVYGPGWGAGSRPIRSILRDVFAAHAAQDVVLVCGRRQGALAAWGRRHGLAVAPADTDPH
EEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCEEECCCCCHH
DLLDGATCVYAHPTTDLARLAVLRGLAVKGIPDGMSLAGIMTDIANRTDYIDPFTGAPMA
HHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH
CADAITLLADWRRTIMANRRIGACLGMSRWKRRRIADFLATAPGHPPFRPDIRAGQRGAV
HHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE
AVWATRQPPGLEDAARRVGIPLWRVEDGFIRSIGLGSALTPPSSITIDTRGMYYDPAQES
EEEECCCCCCHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCCCEEEECCCCEECCCCCC
DLEHILATSPFDDVLRARARKLMDALVLLGISKYGPGRASALPASWDAAGRRTILVPGQV
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
ADDQSVRRGGGRIAGNLELLQAVRESNPDAFILYRPHPDVEATHRVGHVDDVLVLRLADR
CCCHHHHHCCCCEECCHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHH
IDRGGAITDTIARVDEVHTLTSLAGFEALMRGRRVVTYGAPFYAGWGLTVDRGDVPPRRT
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCEEECCCCCCHHHH
RRLSLEELVAGVLILFPRYLDPVTRLPCSPEVLIERLQDARVWRPTWWMRALALQTGWRK
HCCCHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AVARYRAAVAS
HHHHHHHHHCC
>Mature Secondary Structure
MLRPPPFHRVMPVLAVKQDGATSERVCGSGRELDGLAARIVRQRVGGCFWGRPAGARRPV
CCCCCCHHHHHHHHEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCE
VVYGPGWGAGSRPIRSILRDVFAAHAAQDVVLVCGRRQGALAAWGRRHGLAVAPADTDPH
EEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCEEECCCCCHH
DLLDGATCVYAHPTTDLARLAVLRGLAVKGIPDGMSLAGIMTDIANRTDYIDPFTGAPMA
HHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH
CADAITLLADWRRTIMANRRIGACLGMSRWKRRRIADFLATAPGHPPFRPDIRAGQRGAV
HHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE
AVWATRQPPGLEDAARRVGIPLWRVEDGFIRSIGLGSALTPPSSITIDTRGMYYDPAQES
EEEECCCCCCHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCCCEEEECCCCEECCCCCC
DLEHILATSPFDDVLRARARKLMDALVLLGISKYGPGRASALPASWDAAGRRTILVPGQV
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
ADDQSVRRGGGRIAGNLELLQAVRESNPDAFILYRPHPDVEATHRVGHVDDVLVLRLADR
CCCHHHHHCCCCEECCHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHH
IDRGGAITDTIARVDEVHTLTSLAGFEALMRGRRVVTYGAPFYAGWGLTVDRGDVPPRRT
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCEEECCCCCCHHHH
RRLSLEELVAGVLILFPRYLDPVTRLPCSPEVLIERLQDARVWRPTWWMRALALQTGWRK
HCCCHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AVARYRAAVAS
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8397187; 7875563 [H]