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The map label for this gene is ssb [H]

Identifier: 162148105

GI number: 162148105

Start: 2387442

End: 2388038

Strand: Direct

Name: ssb [H]

Synonym: GDI_2322

Alternate gene names: 162148105

Gene position: 2387442-2388038 (Clockwise)

Preceding gene: 162148101

Following gene: 162148106

Centisome position: 60.53

GC content: 69.51

Gene sequence:

>597_bases
TTGGGCCGCGCCCCCGGGACCGGACAGCAGCAGGACAGCAGTATGGCGGGTAGCGTCAACAAGGTCATTCTCGTGGGTAA
TCTGGGCAAGGACCCCGAAGTCAGGAACAGCCAGGCCGGCGCCAAGATCGTGTCGCTGACGCTGGCGACCAGCGACACGT
GGAATGACCGTGCGTCCGGCGAACGGCGCGAGCGCACGGAATGGCATCGGGTCGTCATCTTCAACGAACGCCTGGCGGAC
GTGGCCGAGCGGTTCCTGCGCAAGGGCCGCAAGGTCTATCTGGAAGGCACGCTGCAGACCCGCAAATGGACCGACCAGTC
CGGCCAGGAACGCTACACGACCGAGGTCGTGATAGACCGCTTCCGTGGCGAACTGGTGCTGCTGGACAGCAACCGGGGCG
GCGAATCCGGTGACGATGCCGGCGGCGGCGGATATGGCGGCGGGTATTCCGCGCCGTCCGCGCCCCGGCAGATCGGCGGT
GGCCGCGGCGGCAGCGCCGGGGGTCCCGGCGGGAGCGGCGCGGGCGGCGGCAATCCCGGCGGCGGCTGGGACGCACCGCA
TGGCGGCAGCGACCTGGACGACGAAATCCCGTTCTAG

Upstream 100 bases:

>100_bases
GGTATCATCCGGCGCGCATCTGCGTTAGGATGGCGACCGAGTTCCGTCCCCCCACCCAGCACCGGTCCGGGCGGACGGTT
TTTTTCATGGGGGCCCGCCC

Downstream 100 bases:

>100_bases
GCGGGACGCGCCCCCGCCGGGGGCGAATCCGGCCGGGCGGCGCGTTTTTTCCCCGGCCGGACTCTGTGCTATCGTGCGGC
GTGACGCCGCCGGCCCCCAG

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MGRAPGTGQQQDSSMAGSVNKVILVGNLGKDPEVRNSQAGAKIVSLTLATSDTWNDRASGERRERTEWHRVVIFNERLAD
VAERFLRKGRKVYLEGTLQTRKWTDQSGQERYTTEVVIDRFRGELVLLDSNRGGESGDDAGGGGYGGGYSAPSAPRQIGG
GRGGSAGGPGGSGAGGGNPGGGWDAPHGGSDLDDEIPF

Sequences:

>Translated_198_residues
MGRAPGTGQQQDSSMAGSVNKVILVGNLGKDPEVRNSQAGAKIVSLTLATSDTWNDRASGERRERTEWHRVVIFNERLAD
VAERFLRKGRKVYLEGTLQTRKWTDQSGQERYTTEVVIDRFRGELVLLDSNRGGESGDDAGGGGYGGGYSAPSAPRQIGG
GRGGSAGGPGGSGAGGGNPGGGWDAPHGGSDLDDEIPF
>Mature_197_residues
GRAPGTGQQQDSSMAGSVNKVILVGNLGKDPEVRNSQAGAKIVSLTLATSDTWNDRASGERRERTEWHRVVIFNERLADV
AERFLRKGRKVYLEGTLQTRKWTDQSGQERYTTEVVIDRFRGELVLLDSNRGGESGDDAGGGGYGGGYSAPSAPRQIGGG
RGGSAGGPGGSGAGGGNPGGGWDAPHGGSDLDDEIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=110, Percent_Identity=30, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI1790494, Length=101, Percent_Identity=65.3465346534654, Blast_Score=144, Evalue=5e-36,
Organism=Drosophila melanogaster, GI85725234, Length=107, Percent_Identity=31.7757009345794, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24647376, Length=107, Percent_Identity=31.7757009345794, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 20704; Mature: 20573

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAPGTGQQQDSSMAGSVNKVILVGNLGKDPEVRNSQAGAKIVSLTLATSDTWNDRASG
CCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
ERRERTEWHRVVIFNERLADVAERFLRKGRKVYLEGTLQTRKWTDQSGQERYTTEVVIDR
CHHHHCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
FRGELVLLDSNRGGESGDDAGGGGYGGGYSAPSAPRQIGGGRGGSAGGPGGSGAGGGNPG
HCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
GGWDAPHGGSDLDDEIPF
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GRAPGTGQQQDSSMAGSVNKVILVGNLGKDPEVRNSQAGAKIVSLTLATSDTWNDRASG
CCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
ERRERTEWHRVVIFNERLADVAERFLRKGRKVYLEGTLQTRKWTDQSGQERYTTEVVIDR
CHHHHCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
FRGELVLLDSNRGGESGDDAGGGGYGGGYSAPSAPRQIGGGRGGSAGGPGGSGAGGGNPG
HCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
GGWDAPHGGSDLDDEIPF
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]